Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_G13
         (856 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   2.9  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   2.9  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   5.1  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    24   6.8  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
 Frame = +1

Query: 73   IHLETKMALDSFNNLRRSLCGGCLSSDRKLSETNYEYKHLFGELVGSTNQSAHTSLCWEC 252
            I+ E  M+ D+ N  + SLC   L     + E N   + L+G++           L    
Sbjct: 2195 IYTEYLMS-DNMNRAQASLCLEVLKRTGYIDENNLVNRTLYGDMNDDLPFVCGKRLALNH 2253

Query: 253  IKKLKNIRDFKGQ--ARKAQDQLLQLVKDPLF-TLSKLKFS 366
            + K+ + R F  Q   R   D   QL+K   F  L +LK +
Sbjct: 2254 LSKVLSTRSFPYQYGHRYDYDDHDQLIKAKYFHGLEELKLA 2294


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
 Frame = +1

Query: 73   IHLETKMALDSFNNLRRSLCGGCLSSDRKLSETNYEYKHLFGELVGSTNQSAHTSLCWEC 252
            I+ E  M+ D+ N  + SLC   L     + E N   + L+G++           L    
Sbjct: 2205 IYTEYLMS-DNMNRAQASLCLEVLKRTGYIDENNLVNRTLYGDMNDDLPFVCGKRLALNH 2263

Query: 253  IKKLKNIRDFKGQ--ARKAQDQLLQLVKDPLF-TLSKLKFS 366
            + K+ + R F  Q   R   D   QL+K   F  L +LK +
Sbjct: 2264 LSKVLSTRSFPYQYGHRYDYDDHDQLIKAKYFHGLEELKLA 2304


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = -3

Query: 437  INLLSFEINLLLRLIANTSMLSVLLNF---NFDKVNNGSLTNWSS 312
            + LL+  +   + LI     L  LL++   N DK+ + +L NWS+
Sbjct: 897  LKLLAVCMTSQMMLITQLMPLGCLLDYVRNNKDKIGSKALLNWST 941


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -1

Query: 172 WFLIISYLNSNSLRIMTAVGY*RNPMP 92
           W ++  Y+NS+ + I+  +G  + P P
Sbjct: 190 WEVLPDYMNSDHIGILITIGKEQTPSP 216


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,642
Number of Sequences: 2352
Number of extensions: 11513
Number of successful extensions: 59
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90959220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)