Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_G13
(856 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41019-1|AAM51510.1| 542|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical pr... 29 4.2
AL032658-1|CAA21743.2| 782|Caenorhabditis elegans Hypothetical ... 29 4.2
AC025716-15|AAO21409.1| 521|Caenorhabditis elegans Udp-glucuron... 29 4.2
U40799-7|AAA81485.1| 208|Caenorhabditis elegans Ribosomal prote... 28 7.4
U00043-5|AAN65292.1| 505|Caenorhabditis elegans Hypothetical pr... 28 7.4
U00043-4|AAN65291.1| 1076|Caenorhabditis elegans Hypothetical pr... 28 7.4
AL132860-32|CAO82074.1| 570|Caenorhabditis elegans Hypothetical... 28 7.4
AL132860-31|CAB60519.2| 457|Caenorhabditis elegans Hypothetical... 28 7.4
AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical ... 28 9.7
AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical ... 28 9.7
>U41019-1|AAM51510.1| 542|Caenorhabditis elegans Hypothetical
protein C04E7.4 protein.
Length = 542
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +1
Query: 328 KDPLFTLSKLKFSKTDNIDVLAIKRNNKLISKDNKL 435
+ P+F + + SK +NI L +++NNKL+ K + +
Sbjct: 215 RSPVFKVPRKFVSKRENIQALILRKNNKLLIKKSNV 250
>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical
protein F16A11.3a protein.
Length = 1490
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/66 (24%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +1
Query: 352 KLKFSKTDNIDVLAIKRNNKLISK--DNKLIANKKRALSHHNGPEITSAFGSVNPDSSFL 525
++K S +D+ + + ++ N+ K D+KL ++++ ++GP+ + S N S
Sbjct: 667 EIKSSSSDHSETIPVRTANQQQEKADDDKLNTDERQQYMENSGPKFNTDEDSTNDSDSDD 726
Query: 526 EINTFD 543
E N F+
Sbjct: 727 EDNDFE 732
>Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical
protein F16A11.3c protein.
Length = 1046
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/66 (24%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +1
Query: 352 KLKFSKTDNIDVLAIKRNNKLISK--DNKLIANKKRALSHHNGPEITSAFGSVNPDSSFL 525
++K S +D+ + + ++ N+ K D+KL ++++ ++GP+ + S N S
Sbjct: 667 EIKSSSSDHSETIPVRTANQQQEKADDDKLNTDERQQYMENSGPKFNTDEDSTNDSDSDD 726
Query: 526 EINTFD 543
E N F+
Sbjct: 727 EDNDFE 732
>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical
protein F16A11.3a protein.
Length = 1490
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/66 (24%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +1
Query: 352 KLKFSKTDNIDVLAIKRNNKLISK--DNKLIANKKRALSHHNGPEITSAFGSVNPDSSFL 525
++K S +D+ + + ++ N+ K D+KL ++++ ++GP+ + S N S
Sbjct: 667 EIKSSSSDHSETIPVRTANQQQEKADDDKLNTDERQQYMENSGPKFNTDEDSTNDSDSDD 726
Query: 526 EINTFD 543
E N F+
Sbjct: 727 EDNDFE 732
>Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical
protein F16A11.3c protein.
Length = 1046
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/66 (24%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +1
Query: 352 KLKFSKTDNIDVLAIKRNNKLISK--DNKLIANKKRALSHHNGPEITSAFGSVNPDSSFL 525
++K S +D+ + + ++ N+ K D+KL ++++ ++GP+ + S N S
Sbjct: 667 EIKSSSSDHSETIPVRTANQQQEKADDDKLNTDERQQYMENSGPKFNTDEDSTNDSDSDD 726
Query: 526 EINTFD 543
E N F+
Sbjct: 727 EDNDFE 732
>AL032658-1|CAA21743.2| 782|Caenorhabditis elegans Hypothetical
protein Y76A2B.2 protein.
Length = 782
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 475 PEITSAFGSVNPDSSFLEINTFDCHDGDDSTNS 573
P S+ +P + L NTFDC D STNS
Sbjct: 468 PSFLSSSPQSHPSNFILANNTFDCLPNDCSTNS 500
>AC025716-15|AAO21409.1| 521|Caenorhabditis elegans
Udp-glucuronosyltransferase protein31 protein.
Length = 521
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -2
Query: 555 SVMTVKCINFQKT*IWIDRSKS*RDFWSVVMR*SSFLICYQFII 424
+V+ V NF + + ID + R W++ R S F C++F I
Sbjct: 70 NVIIVDKPNFSQDDVEIDMDEVLRPLWTIQNRPSDFATCFEFFI 113
>U40799-7|AAA81485.1| 208|Caenorhabditis elegans Ribosomal protein,
small subunitprotein 8 protein.
Length = 208
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +1
Query: 388 LAIKRNNKLISKDNKLIANKKRALSHHNGPEITSAFGSVNPDSSFLE 528
LA K+N KL +DN ++ NKKR SHH + T + D+ +E
Sbjct: 121 LARKKNAKLSEEDNAIL-NKKR--SHHTMKKYTERQKTAAVDALLIE 164
>U00043-5|AAN65292.1| 505|Caenorhabditis elegans Hypothetical
protein T26A5.5b protein.
Length = 505
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -2
Query: 612 FHYPHHHY-WXRYF*ICTVISVMTVKCINFQKT*IWIDRSKS*RDFWSVVMR*SSFLICY 436
F+ PHH + + + + +V + T I+F T +W K + FW + ++F I
Sbjct: 136 FYNPHHTFPKVQNYCLMSVANCYTDFHIDFSGTSVWYHVLKGRKVFWLIPPTETNFFIYQ 195
Query: 435 QFI 427
+FI
Sbjct: 196 EFI 198
>U00043-4|AAN65291.1| 1076|Caenorhabditis elegans Hypothetical
protein T26A5.5a protein.
Length = 1076
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -2
Query: 612 FHYPHHHY-WXRYF*ICTVISVMTVKCINFQKT*IWIDRSKS*RDFWSVVMR*SSFLICY 436
F+ PHH + + + + +V + T I+F T +W K + FW + ++F I
Sbjct: 136 FYNPHHTFPKVQNYCLMSVANCYTDFHIDFSGTSVWYHVLKGRKVFWLIPPTETNFFIYQ 195
Query: 435 QFI 427
+FI
Sbjct: 196 EFI 198
>AL132860-32|CAO82074.1| 570|Caenorhabditis elegans Hypothetical
protein Y56A3A.7b protein.
Length = 570
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +1
Query: 247 ECIKKLKNIRDFKGQARKAQDQL---LQLVKDPLFTLSKLKFSKTDNIDVLAIKRNNKLI 417
E + +LK + + A + ++L LQL K + +++ K ++D +A K +++
Sbjct: 143 EALLELKQVSEAAVAASELNEKLVERLQLTKRKKSAMMEVRAKKAKDLDDVATKVRAEVM 202
Query: 418 SKDNKLIANKK 450
+ NK+ A KK
Sbjct: 203 ERINKMAALKK 213
>AL132860-31|CAB60519.2| 457|Caenorhabditis elegans Hypothetical
protein Y56A3A.7a protein.
Length = 457
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +1
Query: 247 ECIKKLKNIRDFKGQARKAQDQL---LQLVKDPLFTLSKLKFSKTDNIDVLAIKRNNKLI 417
E + +LK + + A + ++L LQL K + +++ K ++D +A K +++
Sbjct: 143 EALLELKQVSEAAVAASELNEKLVERLQLTKRKKSAMMEVRAKKAKDLDDVATKVRAEVM 202
Query: 418 SKDNKLIANKK 450
+ NK+ A KK
Sbjct: 203 ERINKMAALKK 213
>AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical
protein Y47D3B.5b protein.
Length = 1136
Score = 27.9 bits (59), Expect = 9.7
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +1
Query: 193 FGELVGSTNQSAHTSLCWECIKKLKNIRDFKGQARKAQDQLLQLVKDPLFTLSKLKFSKT 372
FG+L+ ++S TS+C + + K K K +R Q L D +FT S +
Sbjct: 848 FGKLLKKKDESQQTSICDDVVGKSKKEGKKKKASRDENSQASSLGSD-VFTSSNPSSTSD 906
Query: 373 DNIDVLAIKRNNKLISK 423
D+ ++N+K I K
Sbjct: 907 DS------EKNHKKIKK 917
>AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical
protein Y47D3B.5a protein.
Length = 1088
Score = 27.9 bits (59), Expect = 9.7
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +1
Query: 193 FGELVGSTNQSAHTSLCWECIKKLKNIRDFKGQARKAQDQLLQLVKDPLFTLSKLKFSKT 372
FG+L+ ++S TS+C + + K K K +R Q L D +FT S +
Sbjct: 848 FGKLLKKKDESQQTSICDDVVGKSKKEGKKKKASRDENSQASSLGSD-VFTSSNPSSTSD 906
Query: 373 DNIDVLAIKRNNKLISK 423
D+ ++N+K I K
Sbjct: 907 DS------EKNHKKIKK 917
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,448,745
Number of Sequences: 27780
Number of extensions: 270559
Number of successful extensions: 738
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 738
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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