Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_G13
(856 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g17260.1 68414.m02102 ATPase 10, plasma membrane-type, putati... 30 1.7
At5g01780.1 68418.m00097 oxidoreductase, 2OG-Fe(II) oxygenase fa... 29 3.0
At5g62670.1 68418.m07865 ATPase, plasma membrane-type, putative ... 29 3.9
At3g47950.1 68416.m05228 ATPase, plasma membrane-type, putative ... 29 3.9
At1g80660.1 68414.m09465 ATPase 9, plasma membrane-type, putativ... 29 3.9
At3g60330.1 68416.m06743 ATPase, plasma membrane-type, putative ... 29 5.2
At5g54320.1 68418.m06765 hypothetical protein contains Pfam prof... 28 6.9
At5g57350.1 68418.m07165 ATPase 3, plasma membrane-type / proton... 28 9.1
At4g30190.1 68417.m04292 ATPase 2, plasma membrane-type, putativ... 28 9.1
At3g42640.1 68416.m04431 ATPase, plasma membrane-type, putative ... 28 9.1
At2g18960.1 68415.m02213 ATPase 1, plasma membrane-type, putativ... 28 9.1
At2g07560.1 68415.m00875 ATPase, plasma membrane-type, putative ... 28 9.1
At1g43245.1 68414.m04985 expressed protein 28 9.1
>At1g17260.1 68414.m02102 ATPase 10, plasma membrane-type, putative
/ proton pump 10, putative / proton-exporting ATPase,
putative strong similarity to SP|Q43128 ATPase 10,
plasma membrane-type (EC 3.6.3.6) (Proton pump 10)
{Arabidopsis thaliana}; contains InterPro accession
IPR001757: ATPase, E1-E2 type; contains Pfam profile
PF00690: Cation transporter/ATPase, N-terminus
Length = 947
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = -3
Query: 506 LTDPKADVISGPL*CDRALFLFAINLLSFEINLLLRLIANTSMLSVLLNFNF 351
LTDP VI + RA+F N + +++ +R++ ++L+++ ++F
Sbjct: 627 LTDPGLSVIISAVLTSRAIFQRMRNYTVYAVSITIRIVLGFTLLALIWEYDF 678
>At5g01780.1 68418.m00097 oxidoreductase, 2OG-Fe(II) oxygenase
family protein low similarity to alkB protein -
Escherichia coli, PIR:BVECKB, alkB [Caulobacter
crescentus][GI:2055386]; contains Pfam domain PF03171
2OG-Fe(II) oxygenase superfamily
Length = 449
Score = 29.5 bits (63), Expect = 3.0
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +1
Query: 211 STNQSAHTSLCWECIKKLKNIRDFKGQARKAQDQLLQLVKD-PLFTL--SKLKFSKTDNI 381
STN S+ + K++ +R+ + K++DQ Q +KD P F + S L+ + T
Sbjct: 148 STNPSSSSKSSQSQNLKIRKVRNHRNSGFKSRDQSPQRIKDPPPFDICSSVLERNDTSIK 207
Query: 382 D-VLAIKRNNKLISKDNK 432
D +LA + N + + NK
Sbjct: 208 DWILADETNRETVEVSNK 225
>At5g62670.1 68418.m07865 ATPase, plasma membrane-type, putative /
proton pump, putative strong similarity to P-type
H(+)-transporting ATPase from Nicotiana plumbaginifolia
[SP|Q08435, SP|Q08436], Lycopersicon esculentum
[GI:5901757, SP|P22180], Solanum tuberosum [GI:435003];
contains InterPro accession IPR001757: ATPase, E1-E2
type
Length = 956
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/52 (25%), Positives = 28/52 (53%)
Frame = -3
Query: 506 LTDPKADVISGPL*CDRALFLFAINLLSFEINLLLRLIANTSMLSVLLNFNF 351
LT+P VI + RA+F N + +++ +R++ +L+++ F+F
Sbjct: 624 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDF 675
>At3g47950.1 68416.m05228 ATPase, plasma membrane-type, putative /
proton pump, putative strong similarity to P-type
H(+)-transporting ATPase from Nicotiana plumbaginifolia
[SP|Q08435, SP|Q08436], Lycopersicon esculentum
[GI:5901757, SP|P22180], Solanum tuberosum [GI:435003];
contains InterPro accession IPR001757: ATPase, E1-E2
type
Length = 960
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/52 (25%), Positives = 28/52 (53%)
Frame = -3
Query: 506 LTDPKADVISGPL*CDRALFLFAINLLSFEINLLLRLIANTSMLSVLLNFNF 351
LT+P VI + RA+F N + +++ +R++ +L+++ F+F
Sbjct: 628 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWQFDF 679
>At1g80660.1 68414.m09465 ATPase 9, plasma membrane-type, putative /
proton pump 9, putative / proton-exporting ATPase,
putative strong similarity to SP|Q42556 ATPase 9, plasma
membrane-type (EC 3.6.3.6) (Proton pump 9) {Arabidopsis
thaliana}; contains InterPro accession IPR001757:
ATPase, E1-E2 type
Length = 954
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/52 (25%), Positives = 28/52 (53%)
Frame = -3
Query: 506 LTDPKADVISGPL*CDRALFLFAINLLSFEINLLLRLIANTSMLSVLLNFNF 351
LT+P VI + RA+F N + +++ +R++ +L+++ F+F
Sbjct: 625 LTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVMGFMLLALIWKFDF 676
>At3g60330.1 68416.m06743 ATPase, plasma membrane-type, putative /
proton pump, putative similar to P-type
H(+)-transporting ATPase from Nicotiana plumbaginifolia
[SP|Q08435, SP|Q08436], Lycopersicon esculentum
[GI:5901757, SP|P22180], Solanum tuberosum [GI:435003];
contains InterPro accession IPR001757: ATPase, E1-E2
type
Length = 961
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = -3
Query: 506 LTDPKADVISGPL*CDRALFLFAINLLSFEINLLLRLIANTSMLSVLLNFNF 351
LT+P VI + RA+F N + +++ +R++ +L V F+F
Sbjct: 620 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVMGFMLLCVFWEFDF 671
>At5g54320.1 68418.m06765 hypothetical protein contains Pfam profile
PF03478: Protein of unknown function (DUF295)
Length = 369
Score = 28.3 bits (60), Expect = 6.9
Identities = 22/103 (21%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Frame = +1
Query: 187 HLFGELVGSTNQSAHTSLCWECIKKLKNIRDFKGQARKAQDQLLQL---VKDPLFTLSKL 357
H ++V + + SA + +C+ +K + R AQ + +++P F LS++
Sbjct: 134 HCQTQIVTNVSLSASSPEDEDCVVAVKFLGPQLSFCRPAQSNSEWINIRIENPCFYLSRV 193
Query: 358 KFSKTDNIDVLAIKRNNKLISKDNKLIANKKRALSHHNGPEIT 486
+SK DN+ + + + + D + + ++L N P++T
Sbjct: 194 MYSKKDNMFCIPGSGGHLIGTWDLRTHKHNLQSLQFQNLPKLT 236
>At5g57350.1 68418.m07165 ATPase 3, plasma membrane-type / proton
pump 3 nearly identical to SP|P20431 ATPase 3, plasma
membrane-type (EC 3.6.3.6) (Proton pump 3) {Arabidopsis
thaliana}; contains InterPro accession IPR001757:
ATPase, E1-E2 type
Length = 949
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/52 (23%), Positives = 28/52 (53%)
Frame = -3
Query: 506 LTDPKADVISGPL*CDRALFLFAINLLSFEINLLLRLIANTSMLSVLLNFNF 351
LT+P VI + RA+F N + +++ +R++ +++++ F+F
Sbjct: 621 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWKFDF 672
>At4g30190.1 68417.m04292 ATPase 2, plasma membrane-type, putative /
proton pump 2, putative / proton-exporting ATPase,
putative strong similarity to SP|P19456 ATPase 2, plasma
membrane-type (EC 3.6.3.6) (Proton pump 2) {Arabidopsis
thaliana}; contains InterPro accession IPR001757:
ATPase, E1-E2 type; contains Pfam profile PF00690:
Cation transporter/ATPase, N-terminus
Length = 948
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/52 (23%), Positives = 28/52 (53%)
Frame = -3
Query: 506 LTDPKADVISGPL*CDRALFLFAINLLSFEINLLLRLIANTSMLSVLLNFNF 351
LT+P VI + RA+F N + +++ +R++ +++++ F+F
Sbjct: 620 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWEFDF 671
>At3g42640.1 68416.m04431 ATPase, plasma membrane-type, putative /
proton pump, putative strong similarity to P-type
H+-ATPase from [Lycopersicon esculentum] GI:1621440,
[Solanum tuberosum] GI:435001, SP|Q03194 {Nicotiana
plumbaginifolia}; contains InterPro accession IPR001757:
ATPase, E1-E2 type
Length = 948
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/52 (23%), Positives = 28/52 (53%)
Frame = -3
Query: 506 LTDPKADVISGPL*CDRALFLFAINLLSFEINLLLRLIANTSMLSVLLNFNF 351
LT+P VI + RA+F N + +++ +R++ +++++ F+F
Sbjct: 623 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLVALIWRFDF 674
>At2g18960.1 68415.m02213 ATPase 1, plasma membrane-type, putative /
proton pump 1, putative / proton-exporting ATPase,
putative strong similarity to SP|P20649 ATPase 1, plasma
membrane-type (EC 3.6.3.6) (Proton pump 1) {Arabidopsis
thaliana}; contains InterPro accession IPR001757:
ATPase, E1-E2 type; contains Pfam profile PF00690:
Cation transporter/ATPase, N-terminus
Length = 949
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/52 (23%), Positives = 28/52 (53%)
Frame = -3
Query: 506 LTDPKADVISGPL*CDRALFLFAINLLSFEINLLLRLIANTSMLSVLLNFNF 351
LT+P VI + RA+F N + +++ +R++ +++++ F+F
Sbjct: 620 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWEFDF 671
>At2g07560.1 68415.m00875 ATPase, plasma membrane-type, putative /
proton pump, putative similar to P-type
H(+)-transporting ATPase from [Phaseolus vulgaris]
GI:758250, [Lycopersicon esculentum] GI:1621440,
SP|Q03194 {Nicotiana plumbaginifolia}, [Solanum
tuberosum] GI:435001; contains InterPro accession
IPR001757: ATPase, E1-E2 type
Length = 949
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/52 (23%), Positives = 28/52 (53%)
Frame = -3
Query: 506 LTDPKADVISGPL*CDRALFLFAINLLSFEINLLLRLIANTSMLSVLLNFNF 351
LT+P VI + RA+F N + +++ +R++ +++++ F+F
Sbjct: 622 LTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLVALIWEFDF 673
>At1g43245.1 68414.m04985 expressed protein
Length = 558
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +1
Query: 4 WINRSGSETVCLS*LQNNVLFKRIHLETKMALDSFNNLRRSLCGGCLSS 150
WIN S S C + N + +H+ T S L+ +CG L+S
Sbjct: 175 WINHSCSPNSCYRFVNNRTSYHDVHV-TNTETSSNLELQEQVCGTSLNS 222
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,234,499
Number of Sequences: 28952
Number of extensions: 241571
Number of successful extensions: 632
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 632
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1989897600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -