Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_G12
         (1063 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_800| Best HMM Match : No HMM Matches (HMM E-Value=.)                30   2.7  
SB_19560| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.8  
SB_31286| Best HMM Match : HEAT (HMM E-Value=0.092)                    29   6.3  
SB_43118| Best HMM Match : Apidaecin (HMM E-Value=8.1)                 29   8.4  

>SB_800| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 610

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +2

Query: 383 NPXXPXVPRXPGDPXXXRXXTLPAXXXLPXXGPXXAPSPTL 505
           +P  P VP  P DP      T+PA   +P  GP     PT+
Sbjct: 442 DPTDPTVPSDPTDPTVPSDPTVPAGPTVP-SGPAVPTGPTV 481


>SB_19560| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 132

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = +2

Query: 59  PRTAAAVAPCPRWLCATSRSTAPCACATCQPGRHASRATITTT 187
           PR+A  +APC   L   S + APC+  TC    H +R T+  T
Sbjct: 34  PRSAT-LAPCSATLAPCSATLAPCSALTCPMLGH-TRPTLGHT 74


>SB_31286| Best HMM Match : HEAT (HMM E-Value=0.092)
          Length = 1270

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 209 TSFFNTQMVFDLKEESGELIKSPSPPPSHDGSASG 313
           +S F    +F     SGE I     PP+ DG+++G
Sbjct: 810 SSSFRCSYIFTFSSSSGESISYNKQPPASDGNSTG 844


>SB_43118| Best HMM Match : Apidaecin (HMM E-Value=8.1)
          Length = 131

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +2

Query: 206 VTSFFNTQMVFDLKEESGELIKSPSPPPSHDGSASGEGEISGDE 337
           VT+F   ++  D +  +G+ +        +DG   GEGE  G+E
Sbjct: 29  VTAFPRIRLFLDARARTGQSLTLTLVARENDGEGEGEGEGEGEE 72


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,065,051
Number of Sequences: 59808
Number of extensions: 210170
Number of successful extensions: 776
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 16,821,457
effective HSP length: 83
effective length of database: 11,857,393
effective search space used: 3201496110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)