Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_G12
         (1063 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4154|AAF56730.2|  445|Drosophila melanogaster CG31058-P...    32   1.2  
BT029607-1|ABL75666.1|  337|Drosophila melanogaster IP17050p pro...    30   6.2  
X68130-1|CAA48237.1|  943|Drosophila melanogaster protein ( D.me...    29   8.2  
AE014134-1061|AAF52351.2|  471|Drosophila melanogaster CG13990-P...    29   8.2  

>AE014297-4154|AAF56730.2|  445|Drosophila melanogaster CG31058-PA
           protein.
          Length = 445

 Score = 32.3 bits (70), Expect = 1.2
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -3

Query: 101 RASAGMARPRPPFLGQRRLSGASVRPP 21
           R + G  +PRPPF G R + G   RPP
Sbjct: 203 RPAVGPPQPRPPFAGARPMVGMGPRPP 229


>BT029607-1|ABL75666.1|  337|Drosophila melanogaster IP17050p
           protein.
          Length = 337

 Score = 29.9 bits (64), Expect = 6.2
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +2

Query: 275 PSPPPSHDGSASGEGEISGDE 337
           P PPP+H  S SG G+ S DE
Sbjct: 239 PPPPPTHKPSHSGSGKRSADE 259


>X68130-1|CAA48237.1|  943|Drosophila melanogaster protein (
           D.melanogaster DNA sequenceof Het-A transposable element
           9D4. ).
          Length = 943

 Score = 29.5 bits (63), Expect = 8.2
 Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
 Frame = +2

Query: 101 CATSRSTAPCACATCQPGRHAS--RATITTTLSGRADVTSFFNTQMVFDLKEESGELIKS 274
           C T   T P  C  C  G+H S  +   T     +    +  +T  +  +K+ +    K 
Sbjct: 678 CCTKPRTTPATCVNCS-GQHISAYKGCPTYKAEKQKLAANNIDTNKIRTIKDATNNFYKR 736

Query: 275 PSPPPSHD 298
             PPP ++
Sbjct: 737 QGPPPRNN 744


>AE014134-1061|AAF52351.2|  471|Drosophila melanogaster CG13990-PA
           protein.
          Length = 471

 Score = 29.5 bits (63), Expect = 8.2
 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
 Frame = +2

Query: 59  PRTAAAVAPCPRWLCATSRST--APCACATCQPGRHASRATITTTLSGRADVTS 214
           P T    AP     CA + +T  AP    TC PG   +  T  TT +   + T+
Sbjct: 295 PTTTTTCAPTTTTTCAPTTTTTCAPTTTTTCTPGITTTTCTPATTTTCVPETTT 348


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,178,424
Number of Sequences: 53049
Number of extensions: 346790
Number of successful extensions: 1767
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1761
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 5453783118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)