Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_G10
(848 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 314 5e-86
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 314 5e-86
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 314 5e-86
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 312 2e-85
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 282 2e-76
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 282 2e-76
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 280 8e-76
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 277 5e-75
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 275 2e-74
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 275 3e-74
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 275 3e-74
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 274 4e-74
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 260 7e-70
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 257 8e-69
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 241 6e-64
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 217 1e-56
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 140 1e-33
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 139 2e-33
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 139 3e-33
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 137 1e-32
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 137 1e-32
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 134 7e-32
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 120 1e-27
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 120 1e-27
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 79 3e-15
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 79 3e-15
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.59
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 29 4.2
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 29 4.2
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 29 4.2
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 28 7.3
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 28 9.6
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 28 9.6
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 28 9.6
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 28 9.6
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 28 9.6
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 28 9.6
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 28 9.6
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 28 9.6
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 314 bits (771), Expect = 5e-86
Identities = 160/247 (64%), Positives = 182/247 (73%), Gaps = 5/247 (2%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSV*L--RQEV*TGVRHLPRASGS 634
RIR+LAD CTGLQGFL+FH LLMERLSV + ++ + P+ S +
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 635 HCRRRALQLYPHHPHNP*STLTVLSWSTM---KPSMTSAAXNLDIERPTYTNXNRLIGQI 805
L H +TL S M + NLDIERP+YTN NRLIGQI
Sbjct: 181 VVEPYNSILTTH------TTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQI 234
Query: 806 VSSITAS 826
VSSITAS
Sbjct: 235 VSSITAS 241
Score = 59.7 bits (138), Expect = 3e-09
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNSI 665
DYGKK+KLEF+IYPAPQV TAVVEPYNSI
Sbjct: 160 DYGKKAKLEFSIYPAPQVSTAVVEPYNSI 188
Score = 46.4 bits (105), Expect = 3e-05
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +1
Query: 688 KHSDCAFMVDNEAIYDICRR 747
+HSDC+FMVDNEAIYDICRR
Sbjct: 196 EHSDCSFMVDNEAIYDICRR 215
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 314 bits (771), Expect = 5e-86
Identities = 160/247 (64%), Positives = 182/247 (73%), Gaps = 5/247 (2%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSV*L--RQEV*TGVRHLPRASGS 634
RIR+LAD CTGLQGFL+FH LLMERLSV + ++ + P+ S +
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 635 HCRRRALQLYPHHPHNP*STLTVLSWSTM---KPSMTSAAXNLDIERPTYTNXNRLIGQI 805
L H +TL S M + NLDIERP+YTN NRLIGQI
Sbjct: 181 VVEPYNSILTTH------TTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQI 234
Query: 806 VSSITAS 826
VSSITAS
Sbjct: 235 VSSITAS 241
Score = 59.7 bits (138), Expect = 3e-09
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNSI 665
DYGKK+KLEF+IYPAPQV TAVVEPYNSI
Sbjct: 160 DYGKKAKLEFSIYPAPQVSTAVVEPYNSI 188
Score = 46.4 bits (105), Expect = 3e-05
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +1
Query: 688 KHSDCAFMVDNEAIYDICRR 747
+HSDC+FMVDNEAIYDICRR
Sbjct: 196 EHSDCSFMVDNEAIYDICRR 215
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 314 bits (771), Expect = 5e-86
Identities = 160/247 (64%), Positives = 182/247 (73%), Gaps = 5/247 (2%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSV*L--RQEV*TGVRHLPRASGS 634
RIR+LAD CTGLQGFL+FH LLMERLSV + ++ + P+ S +
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 635 HCRRRALQLYPHHPHNP*STLTVLSWSTM---KPSMTSAAXNLDIERPTYTNXNRLIGQI 805
L H +TL S M + NLDIERP+YTN NRLIGQI
Sbjct: 181 VVEPYNSILTTH------TTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQI 234
Query: 806 VSSITAS 826
VSSITAS
Sbjct: 235 VSSITAS 241
Score = 59.7 bits (138), Expect = 3e-09
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNSI 665
DYGKK+KLEF+IYPAPQV TAVVEPYNSI
Sbjct: 160 DYGKKAKLEFSIYPAPQVSTAVVEPYNSI 188
Score = 46.4 bits (105), Expect = 3e-05
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +1
Query: 688 KHSDCAFMVDNEAIYDICRR 747
+HSDC+FMVDNEAIYDICRR
Sbjct: 196 EHSDCSFMVDNEAIYDICRR 215
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 312 bits (766), Expect = 2e-85
Identities = 159/246 (64%), Positives = 181/246 (73%), Gaps = 5/246 (2%)
Frame = +2
Query: 104 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 283
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 284 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 463
VPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDR
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 464 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSV*L--RQEV*TGVRHLPRASGSH 637
IR+LAD CTGLQGFL+FH LLMERLSV + ++ + P+ S +
Sbjct: 121 IRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAV 180
Query: 638 CRRRALQLYPHHPHNP*STLTVLSWSTM---KPSMTSAAXNLDIERPTYTNXNRLIGQIV 808
L H +TL S M + NLDIERP+YTN NRLIGQIV
Sbjct: 181 VEPYNSILTTH------TTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIV 234
Query: 809 SSITAS 826
SSITAS
Sbjct: 235 SSITAS 240
Score = 59.7 bits (138), Expect = 3e-09
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNSI 665
DYGKK+KLEF+IYPAPQV TAVVEPYNSI
Sbjct: 159 DYGKKAKLEFSIYPAPQVSTAVVEPYNSI 187
Score = 46.4 bits (105), Expect = 3e-05
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +1
Query: 688 KHSDCAFMVDNEAIYDICRR 747
+HSDC+FMVDNEAIYDICRR
Sbjct: 195 EHSDCSFMVDNEAIYDICRR 214
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 282 bits (692), Expect = 2e-76
Identities = 144/247 (58%), Positives = 175/247 (70%), Gaps = 5/247 (2%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSV*L--RQEV*TGVRHLPRASGS 634
RIR+LAD C+GLQGF +FH LLMERLSV + ++ + P+ S +
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 635 HCRRRALQLYPHHPHNP*STLTVLSWSTM---KPSMTSAAXNLDIERPTYTNXNRLIGQI 805
L H +TL + M + NLD+ERP+YTN NR+I Q+
Sbjct: 179 VVEPYNSILTTH------TTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTNLNRIISQV 232
Query: 806 VSSITAS 826
VSSITAS
Sbjct: 233 VSSITAS 239
Score = 60.9 bits (141), Expect = 1e-09
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNSI 665
DYGKKSKLEF+IYPAPQV TAVVEPYNSI
Sbjct: 158 DYGKKSKLEFSIYPAPQVSTAVVEPYNSI 186
Score = 47.6 bits (108), Expect = 1e-05
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +1
Query: 688 KHSDCAFMVDNEAIYDICRR 747
+HSDCAFMVDNEAIYDICRR
Sbjct: 194 EHSDCAFMVDNEAIYDICRR 213
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 282 bits (692), Expect = 2e-76
Identities = 144/247 (58%), Positives = 175/247 (70%), Gaps = 5/247 (2%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSV*L--RQEV*TGVRHLPRASGS 634
RIR+LAD C+GLQGF +FH LLMERLSV + ++ + P+ S +
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 635 HCRRRALQLYPHHPHNP*STLTVLSWSTM---KPSMTSAAXNLDIERPTYTNXNRLIGQI 805
L H +TL + M + NLD+ERP+YTN NR+I Q+
Sbjct: 179 VVEPYNSILTTH------TTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTNLNRIISQV 232
Query: 806 VSSITAS 826
VSSITAS
Sbjct: 233 VSSITAS 239
Score = 60.9 bits (141), Expect = 1e-09
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNSI 665
DYGKKSKLEF+IYPAPQV TAVVEPYNSI
Sbjct: 158 DYGKKSKLEFSIYPAPQVSTAVVEPYNSI 186
Score = 47.6 bits (108), Expect = 1e-05
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +1
Query: 688 KHSDCAFMVDNEAIYDICRR 747
+HSDCAFMVDNEAIYDICRR
Sbjct: 194 EHSDCAFMVDNEAIYDICRR 213
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 280 bits (687), Expect = 8e-76
Identities = 142/248 (57%), Positives = 172/248 (69%), Gaps = 5/248 (2%)
Frame = +2
Query: 98 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 277
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 278 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 457
KHVPRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+D+V+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM 124
Query: 458 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSV*L--RQEV*TGVRHLPRASG 631
DR+R+L + C GLQGFL+FH LLMERLSV + ++ + P+ S
Sbjct: 125 DRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQVST 184
Query: 632 SHCRRRALQLYPHHPHNP*STLTVLSWSTM---KPSMTSAAXNLDIERPTYTNXNRLIGQ 802
S L H +TL S M + NLD+ RPTYTN NRLI Q
Sbjct: 185 SMVEPYNSILTTH------TTLEHSDCSFMVDNEAIYDICRRNLDLARPTYTNLNRLIAQ 238
Query: 803 IVSSITAS 826
++SS+TAS
Sbjct: 239 VISSVTAS 246
Score = 58.0 bits (134), Expect = 8e-09
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNSI 665
DYGKKSKLEF IYPAPQV T++VEPYNSI
Sbjct: 165 DYGKKSKLEFCIYPAPQVSTSMVEPYNSI 193
Score = 46.4 bits (105), Expect = 3e-05
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +1
Query: 688 KHSDCAFMVDNEAIYDICRR 747
+HSDC+FMVDNEAIYDICRR
Sbjct: 201 EHSDCSFMVDNEAIYDICRR 220
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 277 bits (680), Expect = 5e-75
Identities = 141/247 (57%), Positives = 174/247 (70%), Gaps = 5/247 (2%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSV*L--RQEV*TGVRHLPRASGS 634
RIR+LAD C+GLQGF +FH LLMERLSV + ++ + P+ S +
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 635 HCRRRALQLYPHHPHNP*STLTVLSWSTM---KPSMTSAAXNLDIERPTYTNXNRLIGQI 805
L H +TL + M + NL ++RP+YTN NR+I Q+
Sbjct: 179 VVEPYNSILTTH------TTLEHSDCAFMVDNEAIYDICRRNLSVDRPSYTNLNRIISQV 232
Query: 806 VSSITAS 826
VSSITAS
Sbjct: 233 VSSITAS 239
Score = 60.9 bits (141), Expect = 1e-09
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNSI 665
DYGKKSKLEF+IYPAPQV TAVVEPYNSI
Sbjct: 158 DYGKKSKLEFSIYPAPQVSTAVVEPYNSI 186
Score = 47.6 bits (108), Expect = 1e-05
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +1
Query: 688 KHSDCAFMVDNEAIYDICRR 747
+HSDCAFMVDNEAIYDICRR
Sbjct: 194 EHSDCAFMVDNEAIYDICRR 213
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 275 bits (675), Expect = 2e-74
Identities = 140/247 (56%), Positives = 173/247 (70%), Gaps = 5/247 (2%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSV*L--RQEV*TGVRHLPRASGS 634
RIR+LAD C+GLQGF +FH LLMERLSV + ++ + P+ +
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTA 178
Query: 635 HCRRRALQLYPHHPHNP*STLTVLSWSTM---KPSMTSAAXNLDIERPTYTNXNRLIGQI 805
L H +TL + M + NL ++RP+YTN NR+I Q+
Sbjct: 179 VVEPYNSILTTH------TTLEHSDCAFMVDNEAIYDICRRNLSVDRPSYTNLNRIISQV 232
Query: 806 VSSITAS 826
VSSITAS
Sbjct: 233 VSSITAS 239
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNSI 665
DYGKKSKLEF+IYPAPQV TAVVEPYNSI
Sbjct: 158 DYGKKSKLEFSIYPAPQVCTAVVEPYNSI 186
Score = 47.6 bits (108), Expect = 1e-05
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +1
Query: 688 KHSDCAFMVDNEAIYDICRR 747
+HSDCAFMVDNEAIYDICRR
Sbjct: 194 EHSDCAFMVDNEAIYDICRR 213
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 275 bits (674), Expect = 3e-74
Identities = 140/247 (56%), Positives = 173/247 (70%), Gaps = 5/247 (2%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSV*L--RQEV*TGVRHLPRASGS 634
RIR+LAD C+GLQGF +FH LLMERLSV + ++ + P+ S +
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 635 HCRRRALQLYPHHPHNP*STLTVLSWSTM---KPSMTSAAXNLDIERPTYTNXNRLIGQI 805
L H +TL + M + NLD++RP+YTN NR+I Q+
Sbjct: 179 VVEPYNSILTTH------TTLEHSDCAFMVDNEAIYDICKRNLDVDRPSYTNLNRIISQV 232
Query: 806 VSSITAS 826
VSSITAS
Sbjct: 233 VSSITAS 239
Score = 60.9 bits (141), Expect = 1e-09
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNSI 665
DYGKKSKLEF+IYPAPQV TAVVEPYNSI
Sbjct: 158 DYGKKSKLEFSIYPAPQVSTAVVEPYNSI 186
Score = 46.4 bits (105), Expect = 3e-05
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +1
Query: 688 KHSDCAFMVDNEAIYDICRR 747
+HSDCAFMVDNEAIYDIC+R
Sbjct: 194 EHSDCAFMVDNEAIYDICKR 213
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 275 bits (674), Expect = 3e-74
Identities = 140/247 (56%), Positives = 173/247 (70%), Gaps = 5/247 (2%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSV*L--RQEV*TGVRHLPRASGS 634
RIR+LAD C+GLQGF +FH LLMERLSV + ++ + P+ S +
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 635 HCRRRALQLYPHHPHNP*STLTVLSWSTM---KPSMTSAAXNLDIERPTYTNXNRLIGQI 805
L H +TL + M + NLD++RP+YTN NR+I Q+
Sbjct: 179 VVEPYNSILTTH------TTLEHSDCAFMVDNEAIYDICKRNLDVDRPSYTNLNRIISQV 232
Query: 806 VSSITAS 826
VSSITAS
Sbjct: 233 VSSITAS 239
Score = 60.9 bits (141), Expect = 1e-09
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNSI 665
DYGKKSKLEF+IYPAPQV TAVVEPYNSI
Sbjct: 158 DYGKKSKLEFSIYPAPQVSTAVVEPYNSI 186
Score = 46.4 bits (105), Expect = 3e-05
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +1
Query: 688 KHSDCAFMVDNEAIYDICRR 747
+HSDCAFMVDNEAIYDIC+R
Sbjct: 194 EHSDCAFMVDNEAIYDICKR 213
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 274 bits (673), Expect = 4e-74
Identities = 137/244 (56%), Positives = 170/244 (69%), Gaps = 2/244 (0%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
HVPRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHYTIGKE++D+V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSV*L--RQEV*TGVRHLPRASGS 634
R+R+L ++C LQGFLIFH L+MERLS+ + ++ + P+ S S
Sbjct: 121 RVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTS 180
Query: 635 HCRRRALQLYPHHPHNP*STLTVLSWSTMKPSMTSAAXNLDIERPTYTNXNRLIGQIVSS 814
L H S + + + +T NL + PTYT+ NRL+ Q+VSS
Sbjct: 181 MVEPYN-SLLTTHTTLEHSDCSFIMDNEAIYEITKV--NLGVRSPTYTHLNRLLAQVVSS 237
Query: 815 ITAS 826
ITAS
Sbjct: 238 ITAS 241
Score = 56.0 bits (129), Expect = 3e-08
Identities = 22/29 (75%), Positives = 28/29 (96%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNSI 665
DYGKK+KLEF+IYPAPQ+ T++VEPYNS+
Sbjct: 160 DYGKKAKLEFSIYPAPQISTSMVEPYNSL 188
Score = 34.7 bits (76), Expect = 0.084
Identities = 12/19 (63%), Positives = 18/19 (94%)
Frame = +1
Query: 688 KHSDCAFMVDNEAIYDICR 744
+HSDC+F++DNEAIY+I +
Sbjct: 196 EHSDCSFIMDNEAIYEITK 214
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 260 bits (638), Expect = 7e-70
Identities = 134/243 (55%), Positives = 162/243 (66%), Gaps = 2/243 (0%)
Frame = +2
Query: 104 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 283
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 284 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 463
VPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 127
Query: 464 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSV*L--RQEV*TGVRHLPRASGSH 637
+++LA+ C GLQGF+IFH LLMERLS + ++ + P+ S S
Sbjct: 128 VKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSM 187
Query: 638 CRRRALQLYPHHPHNP*STLTVLSWSTMKPSMTSAAXNLDIERPTYTNXNRLIGQIVSSI 817
L H S T + + NLD+ RPTYTN NRL+ QI+SSI
Sbjct: 188 VEPYNSILMTHTTLEH-SDCTFM--VDNEAIYDICRRNLDLARPTYTNLNRLVAQIISSI 244
Query: 818 TAS 826
TAS
Sbjct: 245 TAS 247
Score = 56.0 bits (129), Expect = 3e-08
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNSI 665
+YGKK KLEFAIYPAPQV T++VEPYNSI
Sbjct: 166 EYGKKPKLEFAIYPAPQVSTSMVEPYNSI 194
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +1
Query: 688 KHSDCAFMVDNEAIYDICRR 747
+HSDC FMVDNEAIYDICRR
Sbjct: 202 EHSDCTFMVDNEAIYDICRR 221
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 257 bits (629), Expect = 8e-69
Identities = 135/247 (54%), Positives = 161/247 (65%), Gaps = 5/247 (2%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
HVPR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D LD
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLD 117
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSV*L--RQEV*TGVRHLPRASGS 634
RIR+LA+ C GLQGF +FH +LMERLS + ++ + P+ S S
Sbjct: 118 RIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTS 177
Query: 635 HCRRRALQLYPHHPHNP*STLTVLSWSTM---KPSMTSAAXNLDIERPTYTNXNRLIGQI 805
L H +TL S M + NL + RPTY N NR+I Q+
Sbjct: 178 VVEPYNSILTTH------TTLEHSDCSFMVDNEAIYDICRRNLRVSRPTYNNLNRIISQV 231
Query: 806 VSSITAS 826
VSSITAS
Sbjct: 232 VSSITAS 238
Score = 57.6 bits (133), Expect = 1e-08
Identities = 24/29 (82%), Positives = 28/29 (96%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNSI 665
+YGKKSKLEF+IYPAPQ+ T+VVEPYNSI
Sbjct: 157 EYGKKSKLEFSIYPAPQISTSVVEPYNSI 185
Score = 46.4 bits (105), Expect = 3e-05
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +1
Query: 688 KHSDCAFMVDNEAIYDICRR 747
+HSDC+FMVDNEAIYDICRR
Sbjct: 193 EHSDCSFMVDNEAIYDICRR 212
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 241 bits (589), Expect = 6e-64
Identities = 126/246 (51%), Positives = 157/246 (63%), Gaps = 5/246 (2%)
Frame = +2
Query: 104 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 283
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 284 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 463
VPRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++D+VLDR
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDR 124
Query: 464 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSV*L--RQEV*TGVRHLPRASGSH 637
IRK + C GLQGFL+FH LLMERLSV + ++ V P+ S S
Sbjct: 125 IRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSV 184
Query: 638 CRRRALQLYPHHPHNP*STLTVLSWSTM---KPSMTSAAXNLDIERPTYTNXNRLIGQIV 808
L H +TL + S M + L +ERP+Y+N NRLI Q+V
Sbjct: 185 VEPYNSILTTH------TTLELSDCSFMVDNEAIYDLCRQKLHVERPSYSNLNRLIAQVV 238
Query: 809 SSITAS 826
SSITAS
Sbjct: 239 SSITAS 244
Score = 56.0 bits (129), Expect = 3e-08
Identities = 23/29 (79%), Positives = 28/29 (96%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNSI 665
++GKKSKLEF++YPAPQV T+VVEPYNSI
Sbjct: 163 EFGKKSKLEFSVYPAPQVSTSVVEPYNSI 191
Score = 40.3 bits (90), Expect = 0.002
Identities = 15/18 (83%), Positives = 18/18 (100%)
Frame = +1
Query: 694 SDCAFMVDNEAIYDICRR 747
SDC+FMVDNEAIYD+CR+
Sbjct: 201 SDCSFMVDNEAIYDLCRQ 218
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 217 bits (529), Expect = 1e-56
Identities = 114/222 (51%), Positives = 142/222 (63%), Gaps = 2/222 (0%)
Frame = +2
Query: 167 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 346
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 347 YRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXX 526
YR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+++LA+ C GLQGF+IFH
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFG 120
Query: 527 XXXXXXXXXLLMERLSV*L--RQEV*TGVRHLPRASGSHCRRRALQLYPHHPHNP*STLT 700
LLMERLS + ++ + P+ S S L H S T
Sbjct: 121 GGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEH-SDCT 179
Query: 701 VLSWSTMKPSMTSAAXNLDIERPTYTNXNRLIGQIVSSITAS 826
+ + NLD+ RPTYTN NRL+ QI+SSITAS
Sbjct: 180 FM--VDNEAIYDICRRNLDLARPTYTNLNRLVAQIISSITAS 219
Score = 56.0 bits (129), Expect = 3e-08
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNSI 665
+YGKK KLEFAIYPAPQV T++VEPYNSI
Sbjct: 138 EYGKKPKLEFAIYPAPQVSTSMVEPYNSI 166
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +1
Query: 688 KHSDCAFMVDNEAIYDICRR 747
+HSDC FMVDNEAIYDICRR
Sbjct: 174 EHSDCTFMVDNEAIYDICRR 193
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 140 bits (339), Expect = 1e-33
Identities = 69/157 (43%), Positives = 93/157 (59%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGK 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 571
+RK A+ C LQGF + H LL+ ++
Sbjct: 119 VVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKI 155
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNS 662
+Y + F++ P+P+V VVEPYN+
Sbjct: 158 EYPDRIMSSFSVVPSPKVSDTVVEPYNA 185
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 688 KHSDCAFMVDNEAIYDICRR 747
+++D F +DNEA+YDIC R
Sbjct: 194 ENTDETFCIDNEALYDICFR 213
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 139 bits (337), Expect = 2e-33
Identities = 69/157 (43%), Positives = 94/157 (59%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGK 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 571
IRK A+ C LQGF + H LL+ ++
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKI 155
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +1
Query: 688 KHSDCAFMVDNEAIYDICRR 747
+++D + +DNEA+YDIC R
Sbjct: 194 ENTDETYCIDNEALYDICYR 213
Score = 28.7 bits (61), Expect = 5.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +3
Query: 606 FAIYPAPQVPTAVVEPYNS 662
F++ P+P+V VVEPYN+
Sbjct: 167 FSVVPSPKVSDTVVEPYNA 185
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 139 bits (336), Expect = 3e-33
Identities = 69/157 (43%), Positives = 94/157 (59%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGK 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 571
IRK A+ C LQGF + H LL+ ++
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKI 155
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNS 662
+Y + F++ P+P+V VVEPYN+
Sbjct: 158 EYPDRIMSSFSVVPSPKVSDTVVEPYNA 185
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +1
Query: 688 KHSDCAFMVDNEAIYDICRR 747
+++D + +DNEA+YDIC R
Sbjct: 194 ENTDETYCIDNEALYDICYR 213
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 137 bits (331), Expect = 1e-32
Identities = 67/157 (42%), Positives = 93/157 (59%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 571
+RK A+ LQGF + H LL+ ++
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKI 155
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 688 KHSDCAFMVDNEAIYDICRR 747
+++D F +DNEA+YDIC R
Sbjct: 194 ENTDSTFCIDNEALYDICFR 213
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNS 662
+Y + F++ P+P+V VVEPYN+
Sbjct: 158 EYPDRIMNTFSVVPSPKVSDTVVEPYNA 185
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 137 bits (331), Expect = 1e-32
Identities = 67/157 (42%), Positives = 93/157 (59%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 571
+RK A+ LQGF + H LL+ ++
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKI 155
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 688 KHSDCAFMVDNEAIYDICRR 747
+++D F +DNEA+YDIC R
Sbjct: 194 ENTDSTFCIDNEALYDICFR 213
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNS 662
+Y + F++ P+P+V VVEPYN+
Sbjct: 158 EYPDRIMNTFSVVPSPKVSDTVVEPYNA 185
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 134 bits (324), Expect = 7e-32
Identities = 66/157 (42%), Positives = 89/157 (56%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGK 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPRA VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 571
+RK A+ C LQGF + H LL+ ++
Sbjct: 119 VVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKI 155
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNS 662
+Y + + F++ P+P+V VVEPYN+
Sbjct: 158 EYPDRIMMTFSVVPSPKVSDTVVEPYNA 185
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 688 KHSDCAFMVDNEAIYDICRR 747
+++D F +DNEA+YDIC R
Sbjct: 194 ENTDETFCIDNEALYDICFR 213
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 120 bits (289), Expect = 1e-27
Identities = 62/157 (39%), Positives = 88/157 (56%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 571
IR+ A+ L+GF + H LL+ +L
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKL 155
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNSI 665
+Y K+ +I P+ +V VVEPYN+I
Sbjct: 158 EYSDKTLSTCSIIPSAKVSDTVVEPYNAI 186
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 120 bits (289), Expect = 1e-27
Identities = 62/157 (39%), Positives = 88/157 (56%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 571
IR+ A+ L+GF + H LL+ +L
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKL 155
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNSI 665
+Y K+ +I P+ +V VVEPYN+I
Sbjct: 158 EYSDKTLSTCSIIPSAKVSDTVVEPYNAI 186
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 79.4 bits (187), Expect = 3e-15
Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 3/156 (1%)
Frame = +2
Query: 113 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 292
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 293 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 463
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 464 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 571
I + A+ L G L H LL+ERL
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERL 159
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 79.4 bits (187), Expect = 3e-15
Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 3/156 (1%)
Frame = +2
Query: 113 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 292
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 293 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 463
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 464 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 571
I + A+ L G L H LL+ERL
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERL 159
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.59
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 129 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAST 284
A P MP+ S + S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 143 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 322
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 323 VDE 331
DE
Sbjct: 116 ADE 118
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 143 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 322
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 81 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 133
Query: 323 VDE 331
DE
Sbjct: 134 ADE 136
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 143 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 322
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 323 VDE 331
DE
Sbjct: 116 ADE 118
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 391 FLTSNKLFWMKQLSVCASADLINNSRFKIDED 296
FL K F K ++VC S LI R+ DED
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDED 263
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 320 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 463
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 625 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 670
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 320 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 463
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 839 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 884
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 320 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 463
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 975 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1020
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 320 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 463
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 320 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 463
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 320 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 463
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1016 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1061
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 320 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 463
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1027 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1072
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 320 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 463
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1028 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1073
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,144,496
Number of Sequences: 27780
Number of extensions: 411603
Number of successful extensions: 994
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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