Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_G10
(848 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 319 2e-87
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 319 2e-87
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 318 3e-87
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 318 3e-87
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 301 5e-82
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 301 5e-82
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 286 1e-77
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 140 1e-33
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 138 3e-33
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 137 1e-32
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 137 1e-32
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 136 2e-32
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 136 2e-32
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 135 4e-32
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 134 7e-32
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 130 9e-31
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 103 1e-22
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 103 2e-22
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 31 1.3
At4g14510.1 68417.m02236 expressed protein contains Pfam domain,... 30 2.2
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 29 3.9
At1g52160.1 68414.m05887 metallo-beta-lactamase family protein 29 3.9
At3g29160.3 68416.m03654 Snf1-related protein kinase (KIN11) ide... 28 9.0
At3g29160.2 68416.m03653 Snf1-related protein kinase (KIN11) ide... 28 9.0
At3g29160.1 68416.m03652 Snf1-related protein kinase (KIN11) ide... 28 9.0
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 319 bits (783), Expect = 2e-87
Identities = 158/244 (64%), Positives = 181/244 (74%), Gaps = 2/244 (0%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSV*LRQEV*TG--VRHLPRASGS 634
RIRKLAD CTGLQGFL+F+ LL+ERLSV ++ G V P+ S S
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 635 HCRRRALQLYPHHPHNP*STLTVLSWSTMKPSMTSAAXNLDIERPTYTNXNRLIGQIVSS 814
L H +L + +L IERPTYTN NRL+ Q++SS
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLDNEAI---YDICRRSLSIERPTYTNLNRLVSQVISS 237
Query: 815 ITAS 826
+TAS
Sbjct: 238 LTAS 241
Score = 54.4 bits (125), Expect = 9e-08
Identities = 22/29 (75%), Positives = 26/29 (89%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNSI 665
DYGKKSKL F +YP+PQV T+VVEPYNS+
Sbjct: 160 DYGKKSKLGFTVYPSPQVSTSVVEPYNSV 188
Score = 36.3 bits (80), Expect = 0.026
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = +1
Query: 688 KHSDCAFMVDNEAIYDICRR 747
+H+D + ++DNEAIYDICRR
Sbjct: 196 EHTDVSILLDNEAIYDICRR 215
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 319 bits (783), Expect = 2e-87
Identities = 158/244 (64%), Positives = 181/244 (74%), Gaps = 2/244 (0%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSV*LRQEV*TG--VRHLPRASGS 634
RIRKLAD CTGLQGFL+F+ LL+ERLSV ++ G V P+ S S
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 635 HCRRRALQLYPHHPHNP*STLTVLSWSTMKPSMTSAAXNLDIERPTYTNXNRLIGQIVSS 814
L H +L + +L IERPTYTN NRL+ Q++SS
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLDNEAI---YDICRRSLSIERPTYTNLNRLVSQVISS 237
Query: 815 ITAS 826
+TAS
Sbjct: 238 LTAS 241
Score = 54.4 bits (125), Expect = 9e-08
Identities = 22/29 (75%), Positives = 26/29 (89%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNSI 665
DYGKKSKL F +YP+PQV T+VVEPYNS+
Sbjct: 160 DYGKKSKLGFTVYPSPQVSTSVVEPYNSV 188
Score = 36.3 bits (80), Expect = 0.026
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = +1
Query: 688 KHSDCAFMVDNEAIYDICRR 747
+H+D + ++DNEAIYDICRR
Sbjct: 196 EHTDVSILLDNEAIYDICRR 215
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 318 bits (781), Expect = 3e-87
Identities = 158/244 (64%), Positives = 181/244 (74%), Gaps = 2/244 (0%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSV*LRQEV*TG--VRHLPRASGS 634
RIRKLAD CTGLQGFL+F+ LL+ERLSV ++ G V P+ S S
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 635 HCRRRALQLYPHHPHNP*STLTVLSWSTMKPSMTSAAXNLDIERPTYTNXNRLIGQIVSS 814
L H +L + +L+IERPTYTN NRL+ Q++SS
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLDNEAI---YDICRRSLNIERPTYTNLNRLVSQVISS 237
Query: 815 ITAS 826
+TAS
Sbjct: 238 LTAS 241
Score = 54.4 bits (125), Expect = 9e-08
Identities = 22/29 (75%), Positives = 26/29 (89%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNSI 665
DYGKKSKL F +YP+PQV T+VVEPYNS+
Sbjct: 160 DYGKKSKLGFTVYPSPQVSTSVVEPYNSV 188
Score = 36.3 bits (80), Expect = 0.026
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = +1
Query: 688 KHSDCAFMVDNEAIYDICRR 747
+H+D + ++DNEAIYDICRR
Sbjct: 196 EHTDVSILLDNEAIYDICRR 215
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 318 bits (781), Expect = 3e-87
Identities = 158/244 (64%), Positives = 181/244 (74%), Gaps = 2/244 (0%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSV*LRQEV*TG--VRHLPRASGS 634
RIRKLAD CTGLQGFL+F+ LL+ERLSV ++ G V P+ S S
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 635 HCRRRALQLYPHHPHNP*STLTVLSWSTMKPSMTSAAXNLDIERPTYTNXNRLIGQIVSS 814
L H +L + +L+IERPTYTN NRL+ Q++SS
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLDNEAI---YDICRRSLNIERPTYTNLNRLVSQVISS 237
Query: 815 ITAS 826
+TAS
Sbjct: 238 LTAS 241
Score = 54.4 bits (125), Expect = 9e-08
Identities = 22/29 (75%), Positives = 26/29 (89%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNSI 665
DYGKKSKL F +YP+PQV T+VVEPYNS+
Sbjct: 160 DYGKKSKLGFTVYPSPQVSTSVVEPYNSV 188
Score = 36.3 bits (80), Expect = 0.026
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = +1
Query: 688 KHSDCAFMVDNEAIYDICRR 747
+H+D + ++DNEAIYDICRR
Sbjct: 196 EHTDVSILLDNEAIYDICRR 215
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 301 bits (738), Expect = 5e-82
Identities = 151/248 (60%), Positives = 182/248 (73%), Gaps = 6/248 (2%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSV*LRQEV*TGVRHLPRASGSHC 640
R+RKLAD CTGLQGFL+F+ LL+ERLSV ++ G P S
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVS-- 178
Query: 641 RRRALQLYPHHPHNP*STLTVLSWSTMKPSMTSAA------XNLDIERPTYTNXNRLIGQ 802
++ Y ++ ST ++L + + + + A +LDIERPTYTN NRLI Q
Sbjct: 179 -TAVVEPY----NSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQ 233
Query: 803 IVSSITAS 826
I+SS+T S
Sbjct: 234 IISSLTTS 241
Score = 56.0 bits (129), Expect = 3e-08
Identities = 24/29 (82%), Positives = 26/29 (89%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNSI 665
DYGKKSKL F IYP+PQV TAVVEPYNS+
Sbjct: 160 DYGKKSKLGFTIYPSPQVSTAVVEPYNSV 188
Score = 37.1 bits (82), Expect = 0.015
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +1
Query: 688 KHSDCAFMVDNEAIYDICRR 747
+H+D A ++DNEAIYDICRR
Sbjct: 196 EHTDVAVLLDNEAIYDICRR 215
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 301 bits (738), Expect = 5e-82
Identities = 151/248 (60%), Positives = 182/248 (73%), Gaps = 6/248 (2%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSV*LRQEV*TGVRHLPRASGSHC 640
R+RKLAD CTGLQGFL+F+ LL+ERLSV ++ G P S
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVS-- 178
Query: 641 RRRALQLYPHHPHNP*STLTVLSWSTMKPSMTSAA------XNLDIERPTYTNXNRLIGQ 802
++ Y ++ ST ++L + + + + A +LDIERPTYTN NRLI Q
Sbjct: 179 -TAVVEPY----NSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQ 233
Query: 803 IVSSITAS 826
I+SS+T S
Sbjct: 234 IISSLTTS 241
Score = 56.0 bits (129), Expect = 3e-08
Identities = 24/29 (82%), Positives = 26/29 (89%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNSI 665
DYGKKSKL F IYP+PQV TAVVEPYNS+
Sbjct: 160 DYGKKSKLGFTIYPSPQVSTAVVEPYNSV 188
Score = 37.1 bits (82), Expect = 0.015
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +1
Query: 688 KHSDCAFMVDNEAIYDICRR 747
+H+D A ++DNEAIYDICRR
Sbjct: 196 EHTDVAVLLDNEAIYDICRR 215
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 286 bits (702), Expect = 1e-77
Identities = 140/244 (57%), Positives = 173/244 (70%), Gaps = 2/244 (0%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
HVPRAVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+G+EIVD L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSV*LRQEV*TG--VRHLPRASGS 634
R+RKLAD CTGLQGFL+F+ LL+ERLSV ++ G + P+ S +
Sbjct: 121 RLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTA 180
Query: 635 HCRRRALQLYPHHPHNP*STLTVLSWSTMKPSMTSAAXNLDIERPTYTNXNRLIGQIVSS 814
L H + +L + +LDIERPTY+N NRLI Q +SS
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVVVLLDNEAI---YDICRRSLDIERPTYSNLNRLISQTISS 237
Query: 815 ITAS 826
+T S
Sbjct: 238 LTTS 241
Score = 54.4 bits (125), Expect = 9e-08
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNSI 665
D+GKKSKL F IYP+PQV TAVVEPYNS+
Sbjct: 160 DFGKKSKLGFTIYPSPQVSTAVVEPYNSV 188
Score = 35.5 bits (78), Expect = 0.045
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +1
Query: 688 KHSDCAFMVDNEAIYDICRR 747
+H+D ++DNEAIYDICRR
Sbjct: 196 EHTDVVVLLDNEAIYDICRR 215
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 140 bits (339), Expect = 1e-33
Identities = 66/160 (41%), Positives = 95/160 (59%), Gaps = 3/160 (1%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 271
MRE + + GQ G QIG+ WE+ C EHGI P G+ +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRY-----VGNSDLQLERVNVYYNEAS 55
Query: 272 AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDL 451
G++VPRA+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D
Sbjct: 56 CGRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDA 115
Query: 452 VLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 571
VLD +RK A+ C LQGF + H LL+ ++
Sbjct: 116 VLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKI 155
Score = 33.9 bits (74), Expect = 0.14
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNS 662
+Y + L F+++P+P+V VVEPYN+
Sbjct: 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNA 185
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 138 bits (335), Expect = 3e-33
Identities = 64/157 (40%), Positives = 93/157 (59%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE + V GQ G QIG+ WE+ C EHG+ P G+ D + N +++E G+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSA-DLQLERINVYYNEASGGR 59
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPRAV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 119
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 571
+RK A+ C LQGF + H LL+ ++
Sbjct: 120 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKI 156
Score = 33.9 bits (74), Expect = 0.14
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNS 662
+Y + L F+++P+P+V VVEPYN+
Sbjct: 159 EYPDRMMLTFSVFPSPKVSDTVVEPYNA 186
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 137 bits (331), Expect = 1e-32
Identities = 64/157 (40%), Positives = 91/157 (57%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGR 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 571
+RK A+ C LQGF + H LL+ ++
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKI 155
Score = 33.9 bits (74), Expect = 0.14
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNS 662
+Y + L F+++P+P+V VVEPYN+
Sbjct: 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNA 185
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 137 bits (331), Expect = 1e-32
Identities = 64/157 (40%), Positives = 91/157 (57%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGR 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 571
+RK A+ C LQGF + H LL+ ++
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKI 155
Score = 33.9 bits (74), Expect = 0.14
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNS 662
+Y + L F+++P+P+V VVEPYN+
Sbjct: 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNA 185
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 136 bits (329), Expect = 2e-32
Identities = 65/157 (41%), Positives = 92/157 (58%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE + + GQ G QIG WE+ C EHGI GQ D + + N +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQL--ERINVYFNEASGGK 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 571
+RK A+ C LQGF + H LL+ ++
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKI 155
Score = 33.1 bits (72), Expect = 0.24
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNS 662
+Y + + F+++P+P+V VVEPYN+
Sbjct: 158 EYPDRMMMTFSVFPSPKVSDTVVEPYNA 185
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 136 bits (328), Expect = 2e-32
Identities = 63/157 (40%), Positives = 93/157 (59%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 YVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 119
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 571
+RK A+ C LQGF + H LL+ ++
Sbjct: 120 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKI 156
Score = 33.9 bits (74), Expect = 0.14
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNS 662
+Y + L F+++P+P+V VVEPYN+
Sbjct: 159 EYPDRMMLTFSVFPSPKVSDTVVEPYNA 186
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 135 bits (326), Expect = 4e-32
Identities = 64/157 (40%), Positives = 93/157 (59%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE + + GQ G QIG+ WE+ LEHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQL--ERVNVYYNEASCGR 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 571
+RK A+ C LQGF + H LL+ ++
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKI 155
Score = 33.1 bits (72), Expect = 0.24
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNS 662
+Y + + F+++P+P+V VVEPYN+
Sbjct: 158 EYPDRMMMTFSVFPSPKVSDTVVEPYNA 185
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 134 bits (324), Expect = 7e-32
Identities = 63/157 (40%), Positives = 91/157 (57%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE + + GQ G QIG WE+ C EHGI G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQL--ERVNVYYNEASCGR 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 571
+RK A+ C LQGF + H LL+ ++
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKI 155
Score = 33.9 bits (74), Expect = 0.14
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNS 662
+Y + L F+++P+P+V VVEPYN+
Sbjct: 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNA 185
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 130 bits (315), Expect = 9e-31
Identities = 63/157 (40%), Positives = 91/157 (57%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE + + GQ G QIG WE+ C EHGI GQ D + + + +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQL--ERIDVYFNEASGGK 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 571
+RK A+ LQGF + H LL+ ++
Sbjct: 119 VVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKI 155
Score = 33.1 bits (72), Expect = 0.24
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVPTAVVEPYNS 662
+Y + + F+++P+P+V VVEPYN+
Sbjct: 158 EYPDRMMMTFSVFPSPKVSDTVVEPYNA 185
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 103 bits (247), Expect = 1e-22
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 2/159 (1%)
Frame = +2
Query: 104 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 283
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 284 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVL 457
+PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ-GKGVEEEIM 119
Query: 458 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 574
D I + AD L+GF++ H L+E L+
Sbjct: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLN 158
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 103 bits (246), Expect = 2e-22
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 2/159 (1%)
Frame = +2
Query: 104 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 283
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 284 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVL 457
+PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ-GKGVEEEIM 119
Query: 458 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 574
D I + AD L+GF++ H L+E L+
Sbjct: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLN 158
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 30.7 bits (66), Expect = 1.3
Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 3/108 (2%)
Frame = -2
Query: 538 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYDFLSNXXXXXXXXXGRIFLTSNKLFWMK 359
+G TEGVED S LV D ++ QI D + IF L +++
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRDSSDS-----SYGNEEIFEAFQSLLYVR 663
Query: 358 QLSVCASADLINNSR---FKIDEDSTGYVLASSGLAEESVERIVSTPD 224
L +++ F++ S +AS LA E+I D
Sbjct: 664 DLEFSLCKEMLGEGELISFQVSNLSDELKIASQELAFVKEEKIALEKD 711
>At4g14510.1 68417.m02236 expressed protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 932
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 179 EHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 328
E GIQ +G + ++ + G D +T F + A P FV+L+ +D
Sbjct: 881 EGGIQANGSL-SETDVEFGSDESDTDFGDNSASSTTPETTFVELQNEELD 929
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -3
Query: 270 PVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 145
PVS L +SPP +W SGW P +PI
Sbjct: 101 PVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At1g52160.1 68414.m05887 metallo-beta-lactamase family protein
Length = 890
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = -2
Query: 307 IDEDSTGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITD---LDS 137
+ E G+ + SG + E + ++ D + H A DA+++ T +D
Sbjct: 748 VGEQILGWKMVYSGDSRPCPETVEASRDATILIHEATFEDALIEEALAKNHSTTKEAIDV 807
Query: 136 G-LANVYRDALTHF 98
G ANVYR LTHF
Sbjct: 808 GSAANVYRIVLTHF 821
>At3g29160.3 68416.m03654 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 359
Score = 27.9 bits (59), Expect = 9.0
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Frame = +2
Query: 167 LYCLEHGIQP--DGQMPT-DKTIGGGDDSFNTFFSETGAGKHVPRAVFVD-LEPTVVDEV 334
LY L G P D +P K I GG + + S A +PR + VD ++ + E+
Sbjct: 208 LYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRITIPEI 266
Query: 335 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 463
R + Q P L D + + I +E+V++ DR
Sbjct: 267 RQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
>At3g29160.2 68416.m03653 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 512
Score = 27.9 bits (59), Expect = 9.0
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Frame = +2
Query: 167 LYCLEHGIQP--DGQMPT-DKTIGGGDDSFNTFFSETGAGKHVPRAVFVD-LEPTVVDEV 334
LY L G P D +P K I GG + + S A +PR + VD ++ + E+
Sbjct: 208 LYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRITIPEI 266
Query: 335 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 463
R + Q P L D + + I +E+V++ DR
Sbjct: 267 RQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
>At3g29160.1 68416.m03652 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 512
Score = 27.9 bits (59), Expect = 9.0
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Frame = +2
Query: 167 LYCLEHGIQP--DGQMPT-DKTIGGGDDSFNTFFSETGAGKHVPRAVFVD-LEPTVVDEV 334
LY L G P D +P K I GG + + S A +PR + VD ++ + E+
Sbjct: 208 LYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRITIPEI 266
Query: 335 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 463
R + Q P L D + + I +E+V++ DR
Sbjct: 267 RQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,306,724
Number of Sequences: 28952
Number of extensions: 396299
Number of successful extensions: 1215
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1204
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1970388800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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