Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_G09
(870 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin pr... 255 3e-68
AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin ... 255 3e-68
Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical pr... 98 8e-21
Z83116-11|CAM84819.1| 278|Caenorhabditis elegans Hypothetical p... 31 0.81
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 30 1.9
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 30 1.9
Z75714-2|CAB00059.1| 474|Caenorhabditis elegans Hypothetical pr... 29 5.7
U80033-2|AAM15608.1| 1009|Caenorhabditis elegans Hypothetical pr... 29 5.7
AL132877-17|CAB60849.2| 269|Caenorhabditis elegans Hypothetical... 29 5.7
U64844-9|AAB18309.1| 330|Caenorhabditis elegans Serpentine rece... 28 7.5
Z66494-5|CAA91259.1| 473|Caenorhabditis elegans Hypothetical pr... 28 10.0
>X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin
protein.
Length = 395
Score = 255 bits (625), Expect = 3e-68
Identities = 116/193 (60%), Positives = 143/193 (74%), Gaps = 1/193 (0%)
Frame = +1
Query: 121 FFEXXFPDXSWXSNWVYSEHPGKXFGKFKLTAGKFFSDPEDDKGLKTSEDARFYALSRKF 300
+F+ F D SW WV S+H FG FKL+AGKFF D+G++TS+DA+FY+ + KF
Sbjct: 18 YFKEEFNDASWEKRWVQSKHKDD-FGAFKLSAGKFFDVESRDQGIQTSQDAKFYSRAAKF 76
Query: 301 -KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDICGPG 477
K FSN+GK LV+Q+TVKHEQ IDCGGGY+KV + D HGETPY +MFGPDICGP
Sbjct: 77 DKDFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGPDICGP- 135
Query: 478 TKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLKADW 657
T++VHVI +YKG+N LIKK+I CK D THLYTLI+ DNTYEV ID E ++G L+ DW
Sbjct: 136 TRRVHVILNYKGENKLIKKEITCKSDELTHLYTLILNSDNTYEVKIDGESAQTGSLEEDW 195
Query: 658 DFLPPKKIKDPEA 696
D LP KKIKDP+A
Sbjct: 196 DLLPAKKIKDPDA 208
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +2
Query: 734 DPEXKKPEDWDKPEHIPXPNA 796
D E KPEDW+KPEHIP P+A
Sbjct: 222 DAEDAKPEDWEKPEHIPDPDA 242
Score = 31.9 bits (69), Expect = 0.61
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 734 DPEXKKPEDWDKPEHI 781
DP+ KKPEDWD+ E+I
Sbjct: 205 DPDAKKPEDWDEREYI 220
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2
Query: 725 HYXDPEXKKPEDWD 766
H DP+ KKPEDWD
Sbjct: 236 HIPDPDAKKPEDWD 249
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +3
Query: 669 AQENQGP*SXKPEDWDDK---PTXQTPXTKSLRIGTNLNTFXTQMPQT*XWDXXMDGKWX 839
A++ + P + KPEDWD++ + + ++ + P+ WD MDG+W
Sbjct: 200 AKKIKDPDAKKPEDWDEREYIDDAEDAKPEDWEKPEHIPDPDAKKPE--DWDDEMDGEWE 257
Query: 840 P 842
P
Sbjct: 258 P 258
>AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin
protein 1 protein.
Length = 395
Score = 255 bits (625), Expect = 3e-68
Identities = 116/193 (60%), Positives = 143/193 (74%), Gaps = 1/193 (0%)
Frame = +1
Query: 121 FFEXXFPDXSWXSNWVYSEHPGKXFGKFKLTAGKFFSDPEDDKGLKTSEDARFYALSRKF 300
+F+ F D SW WV S+H FG FKL+AGKFF D+G++TS+DA+FY+ + KF
Sbjct: 18 YFKEEFNDASWEKRWVQSKHKDD-FGAFKLSAGKFFDVESRDQGIQTSQDAKFYSRAAKF 76
Query: 301 -KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDICGPG 477
K FSN+GK LV+Q+TVKHEQ IDCGGGY+KV + D HGETPY +MFGPDICGP
Sbjct: 77 DKDFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGPDICGP- 135
Query: 478 TKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLKADW 657
T++VHVI +YKG+N LIKK+I CK D THLYTLI+ DNTYEV ID E ++G L+ DW
Sbjct: 136 TRRVHVILNYKGENKLIKKEITCKSDELTHLYTLILNSDNTYEVKIDGESAQTGSLEEDW 195
Query: 658 DFLPPKKIKDPEA 696
D LP KKIKDP+A
Sbjct: 196 DLLPAKKIKDPDA 208
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +2
Query: 734 DPEXKKPEDWDKPEHIPXPNA 796
D E KPEDW+KPEHIP P+A
Sbjct: 222 DAEDAKPEDWEKPEHIPDPDA 242
Score = 31.9 bits (69), Expect = 0.61
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 734 DPEXKKPEDWDKPEHI 781
DP+ KKPEDWD+ E+I
Sbjct: 205 DPDAKKPEDWDEREYI 220
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2
Query: 725 HYXDPEXKKPEDWD 766
H DP+ KKPEDWD
Sbjct: 236 HIPDPDAKKPEDWD 249
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +3
Query: 669 AQENQGP*SXKPEDWDDK---PTXQTPXTKSLRIGTNLNTFXTQMPQT*XWDXXMDGKWX 839
A++ + P + KPEDWD++ + + ++ + P+ WD MDG+W
Sbjct: 200 AKKIKDPDAKKPEDWDEREYIDDAEDAKPEDWEKPEHIPDPDAKKPE--DWDDEMDGEWE 257
Query: 840 P 842
P
Sbjct: 258 P 258
>Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical
protein ZK632.6 protein.
Length = 619
Score = 97.9 bits (233), Expect = 8e-21
Identities = 60/165 (36%), Positives = 86/165 (52%), Gaps = 15/165 (9%)
Frame = +1
Query: 238 EDDKGLKTSEDARFYALSRKFK-PFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFD--CKL 408
E D GL AR +A++ K PF+ + VVQ+ +K E+ +CGGGYLK+ +
Sbjct: 107 EGDLGLIVKTKARHHAIAAKLNTPFAFDANTFVVQYDIKFEEGQECGGGYLKLLSEGAEK 166
Query: 409 EQKDMHGETPYEIMFGPDICGPGTKKVHVIFSYKGKNHLIKKDIRCK----------DDV 558
+ + +T Y IMFGPD CG T KVH+IF YK + + DD
Sbjct: 167 DLANFQDKTAYTIMFGPDKCG-ATGKVHLIFRYKNPINGTISEYHANQPTTIGSTYWDDH 225
Query: 559 YTHLYTLIVKPDNTYEVLIDNEKVESGDLKADWD--FLPPKKIKD 687
THL+TL+VKP Y V +D + + G++ +D PPK+I D
Sbjct: 226 NTHLFTLVVKPTGEYSVSVDGKSLYYGNMMSDVTPALTPPKQIFD 270
Score = 28.3 bits (60), Expect = 7.5
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +2
Query: 734 DPEXKKPEDWDK 769
DPE KKP+DWD+
Sbjct: 325 DPEAKKPQDWDE 336
>Z83116-11|CAM84819.1| 278|Caenorhabditis elegans Hypothetical
protein M01B2.12 protein.
Length = 278
Score = 31.5 bits (68), Expect = 0.81
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = -1
Query: 525 EVVLTLVTEDYVYLLGSWTTDVRAEHNLIWSLSVHVLLLQFAVKDLEVSASTVNVLF 355
E+ + +V+ D+ LL W+ +VRAE L ++ L F +D + S + L+
Sbjct: 36 EIRIQMVSADFGILLAEWSKEVRAEFTSAELLELYKKCLNFVKEDNKPSMVEITQLY 92
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical protein
K07E12.1a protein.
Length = 13100
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 514 KNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEV-LIDNEKVES 636
K I+K++ C+D THL L D+TY V ++ NE+V++
Sbjct: 12856 KEKWIRKEVTCRDSFGTHLNEL--PSDHTYTVCVMTNERVDN 12895
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin protein.
Length = 13100
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 514 KNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEV-LIDNEKVES 636
K I+K++ C+D THL L D+TY V ++ NE+V++
Sbjct: 12856 KEKWIRKEVTCRDSFGTHLNEL--PSDHTYTVCVMTNERVDN 12895
>Z75714-2|CAB00059.1| 474|Caenorhabditis elegans Hypothetical
protein ZC434.3 protein.
Length = 474
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 616 DNEKVESGDLKADWDFLPPKKIKDPE 693
D K++S D+K DW + P + + PE
Sbjct: 426 DFRKIDSDDVKPDWPYAPGSRRRAPE 451
>U80033-2|AAM15608.1| 1009|Caenorhabditis elegans Hypothetical
protein T23H2.3 protein.
Length = 1009
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -1
Query: 414 LLQFAVKDLEVSASTVNVLFMFDSELDDQGFTLITERFELTGESIEPRIFRG 259
L + ++K+LE + L F S L D G + + E+T E IE RI G
Sbjct: 233 LQKLSIKELEANKDKKLKLLKFSSNLPDNGARVKLQVDEIT-EEIERRIING 283
>AL132877-17|CAB60849.2| 269|Caenorhabditis elegans Hypothetical
protein Y105E8B.7 protein.
Length = 269
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 559 YTHLYTLIVKPDN-TYEVLIDNEKVESGDLKADWDFLPPKK-IKDPEAXNQKTGMTS 723
+TH +TL VKP N Y+ DN+ ++ + F P + + P +TG S
Sbjct: 23 HTHKWTLFVKPGNRDYDEFPDNKLIQKVKFEIHESFAQPVRFVTKPPFKITETGFAS 79
>U64844-9|AAB18309.1| 330|Caenorhabditis elegans Serpentine
receptor, class h protein212 protein.
Length = 330
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = -1
Query: 624 LIVNEDFIGVVG---FHNQSVQMCVDIIFAADIFFDEVVLTLVTEDYVYLLGSWTT 466
LI+ ++GV FHNQ++ + II ++ FF +V+ + Y W T
Sbjct: 255 LIIPIIYVGVTSLLYFHNQAINNFIVIIVSSHGFFSTIVMICIHVPYREFTLRWLT 310
>Z66494-5|CAA91259.1| 473|Caenorhabditis elegans Hypothetical
protein C34C6.5a protein.
Length = 473
Score = 27.9 bits (59), Expect = 10.0
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 329 WSSSSLSNMNKTLTVEADTSRSLTANWSRRTCTERLHM--RLCSALTSVVQE 478
W SS L+ + T+ + T RS+ + S+ TCTE HM +C S +E
Sbjct: 15 WYSSLLTIFSLTIKRKLKTIRSMQDSTSKCTCTEH-HMGGTICCCCRSDAEE 65
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,259,020
Number of Sequences: 27780
Number of extensions: 423128
Number of successful extensions: 1228
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1205
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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