Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_G07
         (840 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    27   0.24 
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   3.0  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   7.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   7.0  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   9.2  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 26.6 bits (56), Expect = 0.24
 Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 3/46 (6%)
 Frame = +1

Query: 535 SVSCEYEQQTYAPDDQVNKG---CNLCTCKVDNDNXAYWSCTQDTC 663
           S  C YE + Y  + Q       C  C C+  N+      C Q TC
Sbjct: 670 SGDCFYENKFYRQEAQWTSSDNPCTTCFCENGNNKCFTMECPQVTC 715


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
 Frame = +1

Query: 502 YKKVCS---PPQITSVSCEYEQQTYAPDDQVNKGCNLCTCKVDNDNXAYWSCTQDT 660
           Y ++C+    PQ       ++ +   PD    KG  +     +N+N  +W   +DT
Sbjct: 338 YPEICTLLNDPQNAKTQKAFQVKR-VPDPSKRKGSYIFRLPDENNNGGFWVGYEDT 392



 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/45 (20%), Positives = 20/45 (44%)
 Frame = +2

Query: 335 TPVQNCSTAGTAPRVQTTINAATIEKTIAQCRYWVLSAIATSSVI 469
           TP +N   A     +   ++    E   AQ +YW+ +   ++ ++
Sbjct: 250 TPARNPKEADYPSPLYELVDRRNDENIDAQVKYWMSNGAPSAKIV 294


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
 Frame = +2

Query: 425 CRYWVLSAIATSSVITQDTTMTAV---PITRKYA 517
           C YW+L  +A  S   Q    TA     I  KYA
Sbjct: 327 CFYWLLVMVAMFSRTQQSANKTATFVHEIWNKYA 360


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
 Frame = +2

Query: 425 CRYWVLSAIATSSVITQDTTMTAV---PITRKYA 517
           C YW+L  +A  S   Q    TA     I  KYA
Sbjct: 283 CFYWLLVMVAMFSRTQQSANKTATFVHEIWNKYA 316


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 365 YRPLSNSGPEYAKQDDSNGRTKTT 294
           Y P  N+ PE     + NG+ +TT
Sbjct: 382 YIPCWNATPEIITYLEKNGKPRTT 405


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,343
Number of Sequences: 336
Number of extensions: 3701
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23140487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)