Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_G07
(840 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49500| Best HMM Match : Collagen (HMM E-Value=1.8e-07) 37 0.018
SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_25099| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.094
SB_17754| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.094
SB_32584| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_37935| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_34751| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_34423| Best HMM Match : 7tm_2 (HMM E-Value=6e-07) 33 0.29
SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16) 33 0.38
SB_45587| Best HMM Match : Somatomedin_B (HMM E-Value=1e-06) 32 0.67
SB_6059| Best HMM Match : 7tm_2 (HMM E-Value=6.5e-09) 31 1.2
SB_48924| Best HMM Match : 7tm_2 (HMM E-Value=1.5e-16) 31 1.5
SB_20775| Best HMM Match : Somatomedin_B (HMM E-Value=7.7e-05) 31 1.5
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 30 2.0
SB_6887| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_48778| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_34976| Best HMM Match : N_methyl (HMM E-Value=1.7) 30 2.7
SB_48885| Best HMM Match : DUF741 (HMM E-Value=0.88) 29 3.6
SB_59560| Best HMM Match : ShTK (HMM E-Value=1.6) 29 4.7
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 29 4.7
SB_39704| Best HMM Match : 7tm_2 (HMM E-Value=7e-12) 29 4.7
SB_36327| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2
SB_4105| Best HMM Match : WAP (HMM E-Value=0.0002) 29 6.2
SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2
SB_54594| Best HMM Match : Ank (HMM E-Value=4.4e-11) 28 8.2
SB_41690| Best HMM Match : DSL (HMM E-Value=0) 28 8.2
SB_37980| Best HMM Match : 7tm_2 (HMM E-Value=5.3e-13) 28 8.2
SB_22282| Best HMM Match : 7tm_2 (HMM E-Value=9.5e-09) 28 8.2
>SB_49500| Best HMM Match : Collagen (HMM E-Value=1.8e-07)
Length = 621
Score = 37.1 bits (82), Expect = 0.018
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +1
Query: 445 CYCDEFCDHTRHHDDCCPDYKKVCSPPQITSVSCEYEQQTYAPDDQVNKGCNLC-TCKVD 621
CYCD C+ DCC DY+ C+ ITS + E P Q + G + TC +
Sbjct: 174 CYCDVICNEI---GDCCYDYRSKCN---ITSTAPRRES---TPKRQCSNGYYIARTCPEN 224
Query: 622 NDNXAYWSCTQD 657
D CT D
Sbjct: 225 TDRYLDGQCTAD 236
>SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 762
Score = 36.3 bits (80), Expect = 0.031
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 442 LCYCDEFCDHTRHHDDCCPDYKKV 513
+C+CDEFC+ DCCPD+K V
Sbjct: 481 VCFCDEFCEPA---GDCCPDFKAV 501
>SB_25099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 445
Score = 34.7 bits (76), Expect = 0.094
Identities = 23/86 (26%), Positives = 29/86 (33%), Gaps = 2/86 (2%)
Frame = +1
Query: 448 YCDEFCDHTRHHDDCCPDYKKVCSPPQITSVSCEYEQQTYAPDDQVNKGCNLCTCKVD-- 621
YC + D+ R H D C DY C T C+Y + D + C D
Sbjct: 338 YCRGYTDYCRDHTDYCHDYTDYCR--GYTDYCCDYTDYCHDNTDYCRGYTDFCRDNTDYC 395
Query: 622 NDNXAYWSCTQDTCMMSEDLXNDXTN 699
DN D C D D T+
Sbjct: 396 RDNTDRCRDYTDYCRGYTDYCRDNTD 421
Score = 31.5 bits (68), Expect = 0.88
Identities = 23/93 (24%), Positives = 35/93 (37%), Gaps = 2/93 (2%)
Frame = +1
Query: 430 ILGTLCYCDEFCDHTRHHDDCCPDYKKVCSPPQITSVSCEYEQQTYAPDDQVNKGCNLCT 609
I+ T YC ++ D+ R H D C D C T ++ + D + C
Sbjct: 311 IVMTTDYCRDYTDYCRDHTDYCHDNTDYCR--GYTDYCRDHTDYCHDYTDYCRGYTDYCC 368
Query: 610 CKVD--NDNXAYWSCTQDTCMMSEDLXNDXTNK 702
D +DN Y D C + D D T++
Sbjct: 369 DYTDYCHDNTDYCRGYTDFCRDNTDYCRDNTDR 401
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/51 (29%), Positives = 20/51 (39%)
Frame = +1
Query: 364 YCAARPDDNKCCYNRKDDCSVPILGTLCYCDEFCDHTRHHDDCCPDYKKVC 516
YC D C + D C YC ++ D+ R + D C DY C
Sbjct: 217 YCRDNTDYTDYCRDNTDYCR----DYTDYCRDYTDYCRDYTDYCHDYTDYC 263
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 448 YCDEFCDHTRHHDDCCPDYKKVCSPPQITSVSCE 549
YC ++ D+ + D C DY C QI V+ +
Sbjct: 262 YCRDYTDYCHDYTDYCCDYTDYCLTTQIIVVTTQ 295
Score = 28.7 bits (61), Expect = 6.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 448 YCDEFCDHTRHHDDCCPDYKKVC 516
YC ++ D+ R + D C DY C
Sbjct: 255 YCHDYTDYCRDYTDYCHDYTDYC 277
>SB_17754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 34.7 bits (76), Expect = 0.094
Identities = 23/86 (26%), Positives = 29/86 (33%), Gaps = 2/86 (2%)
Frame = +1
Query: 448 YCDEFCDHTRHHDDCCPDYKKVCSPPQITSVSCEYEQQTYAPDDQVNKGCNLCTCKVD-- 621
YC + D+ R H D C DY C T C+Y + D + C D
Sbjct: 208 YCRGYTDYCRDHTDYCHDYTDYCR--GYTDYCCDYTDYCHDNTDYCRGYTDFCRDNTDYC 265
Query: 622 NDNXAYWSCTQDTCMMSEDLXNDXTN 699
DN D C D D T+
Sbjct: 266 RDNTDRCRGYTDYCRGYTDYCRDNTD 291
Score = 31.5 bits (68), Expect = 0.88
Identities = 23/93 (24%), Positives = 35/93 (37%), Gaps = 2/93 (2%)
Frame = +1
Query: 430 ILGTLCYCDEFCDHTRHHDDCCPDYKKVCSPPQITSVSCEYEQQTYAPDDQVNKGCNLCT 609
I+ T YC ++ D+ R H D C D C T ++ + D + C
Sbjct: 181 IVMTTDYCRDYTDYCRDHTDYCHDNTDYCR--GYTDYCRDHTDYCHDYTDYCRGYTDYCC 238
Query: 610 CKVD--NDNXAYWSCTQDTCMMSEDLXNDXTNK 702
D +DN Y D C + D D T++
Sbjct: 239 DYTDYCHDNTDYCRGYTDFCRDNTDYCRDNTDR 271
>SB_32584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 385 DNKCCYNRKD--DCSVPILGTLCYCDEFCDHTRHHDDCCPDYKKVCSPPQI 531
D +C +D D S P C+CD+ C + DCC DY+K C P +
Sbjct: 32 DERCNKTSRDWNDISQP----KCFCDDMCVAFK---DCCHDYEKKCGRPSV 75
>SB_37935| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 210
Score = 33.1 bits (72), Expect = 0.29
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 442 LCYCDEFCDHTRHHDDCCPDYKKVC 516
+CYCDE C+ DCC DY+ C
Sbjct: 3 VCYCDEVCE---RFVDCCADYEHFC 24
>SB_34751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1143
Score = 33.1 bits (72), Expect = 0.29
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +1
Query: 484 DDCCPDY--KKVCSPPQITSVSCEYEQQTYAPDDQVNKGCNLC 606
D CP + + +P +IT CE Y PDD+ N C LC
Sbjct: 627 DSGCPPVNGQSLTTPFEITRAICELYSLPYGPDDRRNPHCALC 669
>SB_34423| Best HMM Match : 7tm_2 (HMM E-Value=6e-07)
Length = 656
Score = 33.1 bits (72), Expect = 0.29
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 442 LCYCDEFCDHTRHHDDCCPDYKKVC 516
+CYCDE C+ DCC DY+ C
Sbjct: 449 VCYCDEVCE---RFVDCCADYEHFC 470
>SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16)
Length = 705
Score = 32.7 bits (71), Expect = 0.38
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +1
Query: 544 CEYEQQTYAPDDQVNKGCNLCTCKVDN-DNXAYWSCTQDTCM 666
C ++ + Y P D+V K C LC CK N C C+
Sbjct: 241 CIHDAKIYKPGDKVYKDCQLCVCKDGQLTNCTGQKCNTGKCL 282
>SB_45587| Best HMM Match : Somatomedin_B (HMM E-Value=1e-06)
Length = 1003
Score = 31.9 bits (69), Expect = 0.67
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 445 CYCDEFCDHTRHHDDCCPDYKKVC 516
CYCD C++ +DCC DY+ C
Sbjct: 279 CYCDAKCEN---FEDCCADYEHFC 299
>SB_6059| Best HMM Match : 7tm_2 (HMM E-Value=6.5e-09)
Length = 1069
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 433 LGTLCYCDEFCDHTRHHDDCCPDYKKVC 516
L LCYCD C+ DCC DY+ C
Sbjct: 291 LDLLCYCDGECEKFL---DCCADYEHFC 315
>SB_48924| Best HMM Match : 7tm_2 (HMM E-Value=1.5e-16)
Length = 736
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 445 CYCDEFCDHTRHHDDCCPDYKKVC 516
C CD +C R+ DCC DY C
Sbjct: 182 CMCDRYC---RYFGDCCADYLTYC 202
>SB_20775| Best HMM Match : Somatomedin_B (HMM E-Value=7.7e-05)
Length = 375
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 445 CYCDEFCDHTRHHDDCCPDYKKVC 516
C CD +C R+ DCC DY C
Sbjct: 156 CMCDRYC---RYFGDCCADYLTYC 176
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Frame = -3
Query: 517 CILSCNRD----SSHRGVLCDHRTRRNSREYPISALSNRLF-DCSS 395
CI+ CN++ ++H GVL DHR R S ++ + L+ DCS+
Sbjct: 135 CIVVCNKNDLPLATHLGVLTDHRGLRISAQHLVQTEWQSLWIDCSA 180
>SB_6887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 875
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 10/44 (22%)
Frame = +1
Query: 514 CSPPQITSVSCEY-------EQQTYAPDDQVNK---GCNLCTCK 615
C+ ++ SCE + Q Y P + VN+ GC++CTCK
Sbjct: 137 CTAKEVLGASCELGGKKYPDKSQFYVPQNPVNQRHPGCDVCTCK 180
>SB_48778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1165
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 433 LGTLCYCDEFCDHTRHHDDCCPDYKKVC 516
L +CYCD C+ DCC DY C
Sbjct: 244 LELICYCDHQCE---QFVDCCADYGHFC 268
>SB_34976| Best HMM Match : N_methyl (HMM E-Value=1.7)
Length = 177
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 344 QNCSTAGTAPRVQTTINAATIEKTIAQCRYWVLSAIATSSVITQDTTMTAVPIT 505
++CS AG PR + A +TIA + S+ T++ I +T T IT
Sbjct: 73 KDCSQAGRVPRCISPTTATLTTETIAASQLTPSSSATTTTTIRTNTKTTESTIT 126
>SB_48885| Best HMM Match : DUF741 (HMM E-Value=0.88)
Length = 841
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/53 (28%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Frame = +1
Query: 364 YCAARPDDNKCCYNRKDDCSVPILGTLC--YCDEFCDHTRHHDDCCPDYKKVC 516
Y + N CC K DC + C ++ C ++ DCC D K C
Sbjct: 176 YDCCKEVQNDCCKEVKYDCCKDLTNDCCKEVQNDCCKEVKY--DCCKDLKNDC 226
>SB_59560| Best HMM Match : ShTK (HMM E-Value=1.6)
Length = 263
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/86 (24%), Positives = 29/86 (33%), Gaps = 2/86 (2%)
Frame = +1
Query: 448 YCDEFCDHTRHHDDCCPDYKKVCSPPQITSVSCEYEQQTYAPDDQVNKGCNLCTCKVD-- 621
YC ++ D+ R + D C DY C T +Y D + C D
Sbjct: 30 YCRDYTDYCRDYTDYCRDYTDYCR--DYTDYCRDYTDYCRDYTDYCRDYTDYCRDYTDYC 87
Query: 622 NDNXAYWSCTQDTCMMSEDLXNDXTN 699
D Y D C + D D T+
Sbjct: 88 RDYTDYCRDYTDYCRENTDYCRDYTD 113
Score = 28.7 bits (61), Expect = 6.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 448 YCDEFCDHTRHHDDCCPDYKKVC 516
YC ++ D+ R + D C DY C
Sbjct: 9 YCHDYTDYCRDYTDYCRDYTDYC 31
Score = 28.3 bits (60), Expect = 8.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 448 YCDEFCDHTRHHDDCCPDYKKVC 516
YC ++ D+ R + D C DY C
Sbjct: 16 YCRDYTDYCRDYTDYCRDYTDYC 38
Score = 28.3 bits (60), Expect = 8.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 448 YCDEFCDHTRHHDDCCPDYKKVC 516
YC ++ D+ R + D C DY C
Sbjct: 23 YCRDYTDYCRDYTDYCRDYTDYC 45
Score = 28.3 bits (60), Expect = 8.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 448 YCDEFCDHTRHHDDCCPDYKKVC 516
YC ++ D+ R + D C DY C
Sbjct: 93 YCRDYTDYCRENTDYCRDYTDYC 115
Score = 28.3 bits (60), Expect = 8.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 448 YCDEFCDHTRHHDDCCPDYKKVC 516
YC ++ D+ R + D C DY C
Sbjct: 107 YCRDYTDYCRDYTDYCRDYTDYC 129
Score = 28.3 bits (60), Expect = 8.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 448 YCDEFCDHTRHHDDCCPDYKKVC 516
YC ++ D+ R + D C DY C
Sbjct: 114 YCRDYTDYCRDYTDYCRDYTDYC 136
Score = 28.3 bits (60), Expect = 8.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 448 YCDEFCDHTRHHDDCCPDYKKVC 516
YC ++ D+ R + D C DY C
Sbjct: 121 YCRDYTDYCRDYTDYCRDYTDYC 143
Score = 28.3 bits (60), Expect = 8.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 448 YCDEFCDHTRHHDDCCPDYKKVC 516
YC ++ D+ R + D C DY C
Sbjct: 128 YCRDYTDYCRDYTDYCRDYTDYC 150
Score = 28.3 bits (60), Expect = 8.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 448 YCDEFCDHTRHHDDCCPDYKKVC 516
YC ++ D+ R + D C DY C
Sbjct: 135 YCRDYTDYCRDYTDYCRDYTDYC 157
Score = 28.3 bits (60), Expect = 8.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 448 YCDEFCDHTRHHDDCCPDYKKVC 516
YC ++ D+ R + D C DY C
Sbjct: 142 YCRDYTDYCRDYTDYCRDYTDYC 164
Score = 28.3 bits (60), Expect = 8.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 448 YCDEFCDHTRHHDDCCPDYKKVC 516
YC ++ D+ R + D C DY C
Sbjct: 149 YCRDYTDYCRDYTDYCRDYTDYC 171
Score = 28.3 bits (60), Expect = 8.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 448 YCDEFCDHTRHHDDCCPDYKKVC 516
YC ++ D+ R + D C DY C
Sbjct: 156 YCRDYTDYCRDYTDYCRDYTDYC 178
Score = 28.3 bits (60), Expect = 8.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 448 YCDEFCDHTRHHDDCCPDYKKVC 516
YC ++ D+ R + D C DY C
Sbjct: 163 YCRDYTDYCRDYTDYCRDYTDYC 185
Score = 28.3 bits (60), Expect = 8.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 448 YCDEFCDHTRHHDDCCPDYKKVC 516
YC ++ D+ R + D C DY C
Sbjct: 170 YCRDYTDYCRDYTDYCRDYTDYC 192
Score = 28.3 bits (60), Expect = 8.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 448 YCDEFCDHTRHHDDCCPDYKKVC 516
YC ++ D+ R + D C DY C
Sbjct: 177 YCRDYTDYCRDYTDYCRDYTDYC 199
Score = 28.3 bits (60), Expect = 8.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 448 YCDEFCDHTRHHDDCCPDYKKVC 516
YC ++ D+ R + D C DY C
Sbjct: 184 YCRDYTDYCRDYTDYCRDYTDYC 206
Score = 28.3 bits (60), Expect = 8.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 448 YCDEFCDHTRHHDDCCPDYKKVC 516
YC ++ D+ R + D C DY C
Sbjct: 191 YCRDYTDYCRDYTDYCRDYTDYC 213
Score = 28.3 bits (60), Expect = 8.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 448 YCDEFCDHTRHHDDCCPDYKKVC 516
YC ++ D+ R + D C DY C
Sbjct: 198 YCRDYTDYCRDYTDYCRDYTDYC 220
Score = 28.3 bits (60), Expect = 8.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 448 YCDEFCDHTRHHDDCCPDYKKVC 516
YC ++ D+ R + D C DY C
Sbjct: 205 YCRDYTDYCRDYTDYCRDYTDYC 227
Score = 28.3 bits (60), Expect = 8.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 448 YCDEFCDHTRHHDDCCPDYKKVC 516
YC ++ D+ R + D C DY C
Sbjct: 212 YCRDYTDYCRDYTDYCRDYTDYC 234
Score = 28.3 bits (60), Expect = 8.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 448 YCDEFCDHTRHHDDCCPDYKKVC 516
YC ++ D+ R + D C DY C
Sbjct: 219 YCRDYTDYCRDYTDYCRDYTDYC 241
Score = 28.3 bits (60), Expect = 8.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 448 YCDEFCDHTRHHDDCCPDYKKVC 516
YC ++ D+ R + D C DY C
Sbjct: 226 YCRDYTDYCRDYTDYCRDYTDYC 248
Score = 28.3 bits (60), Expect = 8.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 448 YCDEFCDHTRHHDDCCPDYKKVC 516
YC ++ D+ R + D C DY C
Sbjct: 233 YCRDYTDYCRDYTDYCRDYTDYC 255
Score = 28.3 bits (60), Expect = 8.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 448 YCDEFCDHTRHHDDCCPDYKKVC 516
YC ++ D+ R + D C DY C
Sbjct: 240 YCRDYTDYCRDYTDYCRDYTDYC 262
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 445 CYCDEFCDHTRHHDDCCPDYKKVC 516
C+CD +C+ ++DCC DY C
Sbjct: 542 CFCDPYCNI---YEDCCYDYAFEC 562
>SB_39704| Best HMM Match : 7tm_2 (HMM E-Value=7e-12)
Length = 873
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 445 CYCDEFCDHTRHHDDCCPDYKKVC 516
C+CD +C +DCC DY + C
Sbjct: 54 CHCDPYCTML---NDCCADYDQQC 74
>SB_36327| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 409
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = -3
Query: 667 SCTCLECTTNTRXCH-YRLYMYTDCSLC 587
SC C CT R H Y++Y C+ C
Sbjct: 272 SCVCTRCTRGVREVHVYKVYARCVCTRC 299
>SB_4105| Best HMM Match : WAP (HMM E-Value=0.0002)
Length = 428
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 529 ITSVSCEYEQQTYAPDDQVNKGCNLCTCKVDNDN 630
+ VSC Y T + KGC+ C C+++ N
Sbjct: 123 VQEVSCYYNGVTLSKGQIFYKGCHRCECRMEGIN 156
>SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 344
Score = 28.7 bits (61), Expect = 6.2
Identities = 24/93 (25%), Positives = 34/93 (36%), Gaps = 4/93 (4%)
Frame = +1
Query: 412 DDCSVPILGTLCYCDEFCDHTRHHDDCCPDYKKV--CSPPQITSV--SCEYEQQTYAPDD 579
D+ P+L LC D T +D +K+ C P +CE E + Y
Sbjct: 199 DEFINPVLQGLC-SDALISITDDDEDTELTFKEFRKCLDPDFKPPMKNCELEGEQYKDGA 257
Query: 580 QVNKGCNLCTCKVDNDNXAYWSCTQDTCMMSED 678
++ CN C C W CT C S +
Sbjct: 258 EIPTDCNSCVCACGR-----WVCTALDCNPSSN 285
>SB_54594| Best HMM Match : Ank (HMM E-Value=4.4e-11)
Length = 733
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/46 (23%), Positives = 20/46 (43%)
Frame = +1
Query: 454 DEFCDHTRHHDDCCPDYKKVCSPPQITSVSCEYEQQTYAPDDQVNK 591
D C H R H PD++ + P++ + + D++V K
Sbjct: 525 DHVCSHLRAHAQNNPDFRSIIGEPRLGKIISAAVHEDLNGDEKVKK 570
>SB_41690| Best HMM Match : DSL (HMM E-Value=0)
Length = 2798
Score = 28.3 bits (60), Expect = 8.2
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 20/90 (22%)
Frame = +1
Query: 451 CDEFCDHT--RH-HDDCCPDYKKVCSP----PQITSVSCEYEQQT-----YAPDDQVNKG 594
CD++C +T +H H C KVC P PQ + Q Y+ D + NK
Sbjct: 178 CDKYCKYTDDKHGHYQCDLHGNKVCLPGWYIPQGNCIKYCVPQNDDIRGHYSCDSKGNKV 237
Query: 595 C--------NLCTCKVDNDNXAYWSCTQDT 660
C N C C+ N + +++C + T
Sbjct: 238 CRRGWYGPLNGCLCRPRNSDSGHYTCNRTT 267
>SB_37980| Best HMM Match : 7tm_2 (HMM E-Value=5.3e-13)
Length = 1297
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = +1
Query: 445 CYCDEFCDHTRHHDDCCPDYKKVCSPPQITSVSCEYEQQTYAPDDQVN 588
CYCD C + DCC DY C + S Q+ D VN
Sbjct: 198 CYCDMDCVR---YSDCCADYHFFCLSNLTGNFSFYNIQRNSNNDSSVN 242
>SB_22282| Best HMM Match : 7tm_2 (HMM E-Value=9.5e-09)
Length = 712
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 445 CYCDEFCDHTRHHDDCCPDYKKVC 516
CYCD+ C DCC DY C
Sbjct: 83 CYCDDLCSSL---GDCCYDYIPRC 103
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,630,833
Number of Sequences: 59808
Number of extensions: 490305
Number of successful extensions: 1321
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1286
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2371447782
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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