Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_G06
         (865 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    99   2e-23
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    99   2e-23
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    90   2e-20
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.3  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   4.1  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   4.1  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =   99 bits (238), Expect = 2e-23
 Identities = 47/53 (88%), Positives = 50/53 (94%)
 Frame = +1

Query: 613 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGD 771
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGD
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGD 53



 Score = 33.1 bits (72), Expect = 0.003
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 777 LGGEDFDNRMVXHFVXEFKRXSK 845
           LGGEDFDNR+V +   +FK+  K
Sbjct: 56  LGGEDFDNRLVEYCTQDFKKKHK 78


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =   99 bits (238), Expect = 2e-23
 Identities = 47/53 (88%), Positives = 50/53 (94%)
 Frame = +1

Query: 613 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGD 771
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGD
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGD 53



 Score = 33.1 bits (72), Expect = 0.003
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 777 LGGEDFDNRMVXHFVXEFKRXSK 845
           LGGEDFDNR+V +   +FK+  K
Sbjct: 56  LGGEDFDNRLVEYCTQDFKKKHK 78


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 90.2 bits (214), Expect = 2e-20
 Identities = 41/53 (77%), Positives = 50/53 (94%)
 Frame = +1

Query: 613 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGD 771
           INEPTAAAIAYGLDKKG  E+N+L++DLGGGTFDVSILTI++G+FEV +T+GD
Sbjct: 1   INEPTAAAIAYGLDKKGA-EQNILVYDLGGGTFDVSILTIDNGVFEVVATSGD 52



 Score = 28.3 bits (60), Expect = 0.082
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +3

Query: 777 LGGEDFDNRMVXHFVXEFKRXSKR 848
           LGGEDFD +++ +F+   K+  K+
Sbjct: 55  LGGEDFDQKVMDYFIKMVKQKHKK 78


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 18/63 (28%), Positives = 27/63 (42%)
 Frame = +1

Query: 322 RKFEDATAQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYL 501
           ++  D  A+ + K    E   D  KPKI+   + ED+    E+       K K T +  L
Sbjct: 221 KELSDDEAEEEKKEEEGED-KDKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEEL 279

Query: 502 GKT 510
            KT
Sbjct: 280 NKT 282


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 568 TKDAGTISGLNVLRIINEPTAA 633
           TKDAG +S   +  ++N+P  A
Sbjct: 330 TKDAGLLSYPEICTLLNDPQNA 351


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 7/49 (14%)
 Frame = +3

Query: 456 FH-GAYENEGNCRSL---SWQNCA---ECSYHGSRVLQ*LSKTSHKRCR 581
           FH GA+  EG C+S    ++ N +   EC  +G  V+   ++T+ K CR
Sbjct: 15  FHFGAFTCEG-CKSFFGRTYNNISSISECKNNGECVINKKNRTACKACR 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,047
Number of Sequences: 336
Number of extensions: 3875
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23789590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)