Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_G05
         (865 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    59   4e-11
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    59   4e-11
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    56   5e-10

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 59.3 bits (137), Expect = 4e-11
 Identities = 29/39 (74%), Positives = 30/39 (76%)
 Frame = +2

Query: 617 IXEPTAAXIAYXLDXKGTGXRNVLIFDLGGGTFXVSILT 733
           I EPTAA IAY LD K    RNVLIFDLGGGTF VS+LT
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVLIFDLGGGTFDVSLLT 39



 Score = 35.5 bits (78), Expect = 5e-04
 Identities = 18/27 (66%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
 Frame = +1

Query: 733 IEDGIXEVKSPPA-TPLGGEDFDNRXV 810
           IE+GI EVK+    T LGGEDFDNR V
Sbjct: 40  IEEGIFEVKATAGDTHLGGEDFDNRLV 66


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 59.3 bits (137), Expect = 4e-11
 Identities = 29/39 (74%), Positives = 30/39 (76%)
 Frame = +2

Query: 617 IXEPTAAXIAYXLDXKGTGXRNVLIFDLGGGTFXVSILT 733
           I EPTAA IAY LD K    RNVLIFDLGGGTF VS+LT
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVLIFDLGGGTFDVSLLT 39



 Score = 35.5 bits (78), Expect = 5e-04
 Identities = 18/27 (66%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
 Frame = +1

Query: 733 IEDGIXEVKSPPA-TPLGGEDFDNRXV 810
           IE+GI EVK+    T LGGEDFDNR V
Sbjct: 40  IEEGIFEVKATAGDTHLGGEDFDNRLV 66


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 55.6 bits (128), Expect = 5e-10
 Identities = 27/39 (69%), Positives = 31/39 (79%)
 Frame = +2

Query: 617 IXEPTAAXIAYXLDXKGTGXRNVLIFDLGGGTFXVSILT 733
           I EPTAA IAY LD KG   +N+L++DLGGGTF VSILT
Sbjct: 1   INEPTAAAIAYGLDKKGA-EQNILVYDLGGGTFDVSILT 38



 Score = 25.8 bits (54), Expect = 0.44
 Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = +1

Query: 733 IEDGIXEVKSPPA-TPLGGEDFDNR 804
           I++G+ EV +    T LGGEDFD +
Sbjct: 39  IDNGVFEVVATSGDTHLGGEDFDQK 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,785
Number of Sequences: 336
Number of extensions: 2653
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23789590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)