BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_G04 (967 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 34 0.001 DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 28 0.12 AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 27 0.29 L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 25 1.2 AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 25 1.2 AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory recept... 24 1.5 AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein pr... 22 6.2 >AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein protein. Length = 370 Score = 34.3 bits (75), Expect = 0.001 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 5/60 (8%) Frame = +2 Query: 176 KKKKASKPW-CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLYTGPGLSIHCMQVH 340 K +P+ C CNR F + +L H++ K F+C CHK+ L H M++H Sbjct: 127 KDSSRDRPFTCEVCNRSFGYKHVLQNHERTHTGEKPFECQECHKRFTRDHHLKTH-MRLH 185 >DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped protein. Length = 126 Score = 27.9 bits (59), Expect = 0.12 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 4/34 (11%) Frame = +2 Query: 203 CWYCNREFDDEKILIQHQKA----KHFKCHICHK 292 C YCNR+F L+ H++ + + C IC K Sbjct: 82 CKYCNRQFTKSYNLLIHERTHTDERPYSCDICGK 115 >AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein protein. Length = 314 Score = 26.6 bits (56), Expect = 0.29 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 5/58 (8%) Frame = +2 Query: 185 KASKP-WCWYCNREFDDEKILIQHQKA----KHFKCHICHKKLYTGPGLSIHCMQVHK 343 K S P C C+R + L H + + FKC IC + T L H M VH+ Sbjct: 130 KLSDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTH-MGVHR 186 Score = 23.0 bits (47), Expect = 3.6 Identities = 9/27 (33%), Positives = 15/27 (55%) Frame = +2 Query: 245 IQHQKAKHFKCHICHKKLYTGPGLSIH 325 I+H+ + +C ICH+ L L +H Sbjct: 127 IEHKLSDPNQCVICHRVLSCKSALQMH 153 >L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein protein. Length = 74 Score = 24.6 bits (51), Expect = 1.2 Identities = 11/30 (36%), Positives = 15/30 (50%) Frame = +2 Query: 251 HQKAKHFKCHICHKKLYTGPGLSIHCMQVH 340 H K F+C CHK+ L H M++H Sbjct: 4 HTGEKPFECQECHKRFTRDHHLKTH-MRLH 32 >AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger protein protein. Length = 456 Score = 24.6 bits (51), Expect = 1.2 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 4/43 (9%) Frame = +2 Query: 209 YCNREF--DDE--KILIQHQKAKHFKCHICHKKLYTGPGLSIH 325 +C + F DE + L H K F C IC+K+ L+ H Sbjct: 351 FCGKRFTRSDELQRHLRTHTGEKRFACPICNKRFMRSDHLAKH 393 >AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory receptor candidate 48 protein. Length = 408 Score = 24.2 bits (50), Expect = 1.5 Identities = 11/46 (23%), Positives = 21/46 (45%) Frame = -1 Query: 358 FVYGFFMYLHAVYGQSRSCVQLFVTNVTFKMLRFLMLDENLFVVKL 221 FV+ +F+YL VY S + + N + + +F++ L Sbjct: 145 FVFCYFIYLFTVYYIYYSVHEASIINFGYTLAKFMIFTSTCIYTNL 190 >AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein protein. Length = 203 Score = 22.2 bits (45), Expect = 6.2 Identities = 7/13 (53%), Positives = 8/13 (61%) Frame = +3 Query: 567 PYXPTPMGARCPP 605 P+ P P RCPP Sbjct: 23 PHSPEPYPPRCPP 35 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 169,426 Number of Sequences: 336 Number of extensions: 3204 Number of successful extensions: 10 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9 length of database: 122,585 effective HSP length: 57 effective length of database: 103,433 effective search space used: 27306312 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -