Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_F24
         (843 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80836-14|AAB37896.1|  185|Caenorhabditis elegans Hypothetical p...    33   0.25 
Z93377-3|CAB07580.1|  358|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z74030-4|CAA98436.1|  113|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z70037-4|CAA93877.1|  146|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z75537-1|CAA99834.1|  455|Caenorhabditis elegans Hypothetical pr...    30   2.4  
AF040651-4|AAB95014.1|  234|Caenorhabditis elegans Hypothetical ...    29   4.1  
AL023851-1|CAA19554.1|  149|Caenorhabditis elegans Hypothetical ...    29   5.5  
AF025450-9|AAB70938.2|  409|Caenorhabditis elegans C-type lectin...    29   5.5  
AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical...    29   5.5  
Z81076-9|CAB03057.1|  372|Caenorhabditis elegans Hypothetical pr...    28   7.2  
AF192264-1|AAF18435.1|  321|Caenorhabditis elegans CHORD contain...    28   7.2  
AC006708-3|AAF60417.1|  321|Caenorhabditis elegans Chord protein...    28   7.2  
Z81542-9|CAI79191.1|  400|Caenorhabditis elegans Hypothetical pr...    28   9.5  
Z81542-8|CAB04417.2|  402|Caenorhabditis elegans Hypothetical pr...    28   9.5  
Z81478-2|CAB03933.1|  195|Caenorhabditis elegans Hypothetical pr...    28   9.5  
AL031627-7|CAA20959.2|  200|Caenorhabditis elegans Hypothetical ...    28   9.5  
AL021492-1|CAA16377.1|  179|Caenorhabditis elegans Hypothetical ...    28   9.5  
AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical ...    28   9.5  
AC024880-3|AAF60915.3|  675|Caenorhabditis elegans Hypothetical ...    28   9.5  

>U80836-14|AAB37896.1|  185|Caenorhabditis elegans Hypothetical
           protein B0432.12 protein.
          Length = 185

 Score = 33.1 bits (72), Expect = 0.25
 Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
 Frame = +3

Query: 129 VLLAASLGPAAAQRITT-IQLDGVQYFISRMNPYSPELNYFLSYQYCRSLGLQLASFETK 305
           +LL  S G  A   + T ++ +G+  F      Y  ++N+  + ++C   G  LA   ++
Sbjct: 8   LLLWISTGSTAPAGVATYLRSNGIVAFHKL---YHLKMNFPRAKKHCEQNGAHLAGITSR 64

Query: 306 EKADSITTYLTNAGYDKYDFWTSGNNLG 389
           E+A  +      AG     +W  G   G
Sbjct: 65  EEAQKLIDLANEAGESNEQYWLGGQRKG 92


>Z93377-3|CAB07580.1|  358|Caenorhabditis elegans Hypothetical
           protein F13A7.7 protein.
          Length = 358

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +3

Query: 225 YSPELNYFLSYQYCRSLGLQ-LASFETKEKADSITTYLTNAGYDKYDFWTSG 377
           Y P L+Y  S    R+  +  LASF ++   DS  T+  N G D+ + W  G
Sbjct: 243 YIPNLSYSNSTSSSRASSVDSLASFNSQSSTDSQNTFRKNGGRDQLE-WKQG 293


>Z74030-4|CAA98436.1|  113|Caenorhabditis elegans Hypothetical
           protein D1054.7 protein.
          Length = 113

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +3

Query: 366 WTSGNNLGTDMFLWMSTGLPFNAT 437
           WT G+  GTD F+W  TG P NA+
Sbjct: 57  WTDGSTTGTDGFIW-ETGEPNNAS 79


>Z70037-4|CAA93877.1|  146|Caenorhabditis elegans Hypothetical
           protein T27D12.3 protein.
          Length = 146

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +3

Query: 366 WTSGNNLGTDMFLWMSTGLPFNATFN 443
           WT G+  GTD F+W  TG P N  +N
Sbjct: 119 WTDGSTTGTDGFIW-KTGDPNNYLYN 143


>Z75537-1|CAA99834.1|  455|Caenorhabditis elegans Hypothetical
           protein F18E2.1 protein.
          Length = 455

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +3

Query: 657 ICEQTRCYYYNYGSDPVSSGAGXXARKPLSLTTTTTAHP 773
           +  +T  YYY YG DPV +      R   +  +   AHP
Sbjct: 227 VSTETYGYYYEYGMDPVMTQYDWLKRDLTTANSNRAAHP 265


>AF040651-4|AAB95014.1|  234|Caenorhabditis elegans Hypothetical
           protein W04H10.4 protein.
          Length = 234

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 366 WTSGNNLGTDMFLWMSTGLPFNATFN 443
           WT G+  GTD F+W   G P N  +N
Sbjct: 177 WTDGSTTGTDGFIW-KAGDPNNYQYN 201


>AL023851-1|CAA19554.1|  149|Caenorhabditis elegans Hypothetical
           protein Y68A4B.1 protein.
          Length = 149

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +3

Query: 366 WTSGNNLGTDMFLWMSTGLPFNATFNY 446
           WT G+  GTD FLW + G P N    Y
Sbjct: 87  WTDGSTTGTDGFLWRN-GDPNNGGIYY 112


>AF025450-9|AAB70938.2|  409|Caenorhabditis elegans C-type lectin
           protein 3 protein.
          Length = 409

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
 Frame = +3

Query: 540 TARHGRYSRTEHVMTNG-CIALKAPTFHWEPQHCGEIKDFICEQTRCY----YYNYGS 698
           TA +  +S     +T G C+  +  +  W    C E + ++CE    +    YYNY +
Sbjct: 101 TAAYDNFSPGNPKVTTGSCVYFETSSGRWLSAPCTEPRSYVCETPSTHEDPCYYNYNN 158


>AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.31 protein.
          Length = 1219

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
 Frame = -3

Query: 142 AASSTRHDVKKNCILSDS--FRICG*SSYKCSHTQECAHATRDTQAHC 5
           AA++    +   C+   S   + C  S  KC   Q C H     QAHC
Sbjct: 602 AAAAEPEIIYPKCLYRSSGYMQTCTQSVQKCDQDQRCKHIRYAMQAHC 649


>Z81076-9|CAB03057.1|  372|Caenorhabditis elegans Hypothetical
           protein F35C5.8 protein.
          Length = 372

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
 Frame = +3

Query: 585 NGCIA---LKAPTFHWEPQHCGEIKDFICEQTRCYYYNY 692
           N C+A       T  W P  C     FICEQ  C   NY
Sbjct: 330 NACVADMKYSDGTTAWTPVSCANNFRFICEQVACDTDNY 368


>AF192264-1|AAF18435.1|  321|Caenorhabditis elegans CHORD containing
           protein protein.
          Length = 321

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
 Frame = +3

Query: 294 FETKEKADSITTYLTNAGY--DKYDFWTSGNNLGTDMFLWMS 413
           F+ KE  +   TY     Y  D Y  WT  +   TD   WM+
Sbjct: 18  FDPKENDNEACTYHPGGPYFHDAYKIWTCCDKKSTDFGTWMN 59


>AC006708-3|AAF60417.1|  321|Caenorhabditis elegans Chord protein
           protein 1 protein.
          Length = 321

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
 Frame = +3

Query: 294 FETKEKADSITTYLTNAGY--DKYDFWTSGNNLGTDMFLWMS 413
           F+ KE  +   TY     Y  D Y  WT  +   TD   WM+
Sbjct: 18  FDPKENDNEACTYHPGGPYFHDAYKIWTCCDKKSTDFGTWMN 59


>Z81542-9|CAI79191.1|  400|Caenorhabditis elegans Hypothetical
           protein F49A5.5b protein.
          Length = 400

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 22/72 (30%), Positives = 26/72 (36%), Gaps = 8/72 (11%)
 Frame = +3

Query: 507 DVPQGSTAPQRTARHGRYSRTEHVMTNGCIALKAP---TFHWEPQHCGEIKDFICEQTRC 677
           DV  G+T+       G Y      M  GCI  K        W    C EI  F+CE    
Sbjct: 221 DVKSGTTSAYNNFADG-YPNN---MAGGCIYYKTTGTQAGQWSSGSCNEIMSFVCELPAT 276

Query: 678 YY-----YNYGS 698
            Y     YNY +
Sbjct: 277 IYDSTCKYNYNN 288


>Z81542-8|CAB04417.2|  402|Caenorhabditis elegans Hypothetical
           protein F49A5.5a protein.
          Length = 402

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 22/72 (30%), Positives = 26/72 (36%), Gaps = 8/72 (11%)
 Frame = +3

Query: 507 DVPQGSTAPQRTARHGRYSRTEHVMTNGCIALKAP---TFHWEPQHCGEIKDFICEQTRC 677
           DV  G+T+       G Y      M  GCI  K        W    C EI  F+CE    
Sbjct: 223 DVKSGTTSAYNNFADG-YPNN---MAGGCIYYKTTGTQAGQWSSGSCNEIMSFVCELPAT 278

Query: 678 YY-----YNYGS 698
            Y     YNY +
Sbjct: 279 IYDSTCKYNYNN 290


>Z81478-2|CAB03933.1|  195|Caenorhabditis elegans Hypothetical
           protein C31G12.2 protein.
          Length = 195

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +3

Query: 366 WTSGNNLGTDMFLWMSTGLPFNA 434
           WT G+  GTD ++W S G P NA
Sbjct: 138 WTDGSTTGTDGWIWRS-GEPNNA 159


>AL031627-7|CAA20959.2|  200|Caenorhabditis elegans Hypothetical
           protein Y102A5C.16 protein.
          Length = 200

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 366 WTSGNNLGTDMFLWMSTGLPFNATFN 443
           WT G+  G+D F+W     P N + N
Sbjct: 143 WTDGSATGSDAFIWNVATEPNNGSLN 168


>AL021492-1|CAA16377.1|  179|Caenorhabditis elegans Hypothetical
           protein Y45F10D.2 protein.
          Length = 179

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = +3

Query: 732 RKPLSLTTTTTAHPIRWSSP-PXRAPSTCRP 821
           R+ +S  TTTTA P+  SSP P + PST +P
Sbjct: 121 RQAVST-TTTTASPMSTSSPTPSQQPSTTQP 150


>AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical
            protein F53H1.4a protein.
          Length = 1370

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 8/72 (11%)
 Frame = +2

Query: 455  TAHRCSCPAC**QHGPSRRTTRKHCSTT-----HRPT--RSVF-QDGTRHD*WLHRAQSS 610
            T    SC  C  + G  R+   K CST      HRPT  R++F ++G +   W  +    
Sbjct: 1113 TLPELSCQVCRRKTGTERKLMCKQCSTVFHYGCHRPTISRALFEEEGFKEGWWCAKCTKE 1172

Query: 611  DLPLGASTLRRD 646
            D     S  + D
Sbjct: 1173 DRRRQLSEAKED 1184


>AC024880-3|AAF60915.3|  675|Caenorhabditis elegans Hypothetical
           protein Y97E10AR.1 protein.
          Length = 675

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = +3

Query: 267 RSLGLQLAS--FETKEKADSITTYLTNAGYD-KYDFWTSGNNLGTDMFLWMSTGLPF 428
           +  G++L +  F   EK  ++ TY    G D +  F    NN+ TD F+W +T   F
Sbjct: 362 KHFGVELITPEFSFVEKCLNLFTYKVQLGPDHRLLFKLDWNNIQTDNFVWSATANVF 418


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,995,834
Number of Sequences: 27780
Number of extensions: 418440
Number of successful extensions: 1161
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1159
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)