Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_F23
         (839 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9GPH3 Cluster: Activating transcription factor; n=1; B...    51   3e-05
UniRef50_UPI0000DB747D Cluster: PREDICTED: similar to CG8669-PA,...    46   9e-04
UniRef50_UPI0000D574DD Cluster: PREDICTED: similar to CG8669-PA,...    39   0.14 
UniRef50_UPI0000DD7C1D Cluster: PREDICTED: hypothetical protein;...    38   0.41 
UniRef50_UPI00015B4E9A Cluster: PREDICTED: similar to activating...    36   1.7  
UniRef50_UPI0000D9D19D Cluster: PREDICTED: tubulin tyrosine liga...    33   6.8  
UniRef50_Q14679 Cluster: Tubulin--tyrosine ligase-like protein 4...    33   6.8  
UniRef50_P36132 Cluster: Putative glycoprotein endopeptidase KAE...    33   6.8  

>UniRef50_Q9GPH3 Cluster: Activating transcription factor; n=1;
           Bombyx mori|Rep: Activating transcription factor -
           Bombyx mori (Silk moth)
          Length = 236

 Score = 51.2 bits (117), Expect = 3e-05
 Identities = 22/25 (88%), Positives = 23/25 (92%)
 Frame = +2

Query: 692 VTHLTPPXSPPGPATQLLLSYPQQA 766
           +THLTPP SPPGPATQLLLSY QQA
Sbjct: 47  LTHLTPPQSPPGPATQLLLSYAQQA 71



 Score = 47.6 bits (108), Expect = 4e-04
 Identities = 22/23 (95%), Positives = 22/23 (95%)
 Frame = +3

Query: 627 FVTSQPTEXLLREFETVYGAVEL 695
           FVTSQPTE LLREFETVYGAVEL
Sbjct: 25  FVTSQPTEELLREFETVYGAVEL 47


>UniRef50_UPI0000DB747D Cluster: PREDICTED: similar to CG8669-PA,
           isoform A; n=1; Apis mellifera|Rep: PREDICTED: similar
           to CG8669-PA, isoform A - Apis mellifera
          Length = 357

 Score = 46.4 bits (105), Expect = 9e-04
 Identities = 30/73 (41%), Positives = 42/73 (57%)
 Frame = +3

Query: 474 LLQQLDSQCKQENIFSNWLEEKVDLPSIFENISEVPERVDPQPRQRF*LQSFVTSQPTEX 653
           LL++LD   K+E  FS+WLEEK++LP IFE +  + E    +      +        T+ 
Sbjct: 64  LLEKLDEWIKEEP-FSDWLEEKIELP-IFEEL-PITENGQIKTTPYNEITKAPQQDDTQT 120

Query: 654 LLREFETVYGAVE 692
           LL+EFETV G VE
Sbjct: 121 LLQEFETVLGDVE 133


>UniRef50_UPI0000D574DD Cluster: PREDICTED: similar to CG8669-PA,
           isoform A isoform 1; n=2; Tribolium castaneum|Rep:
           PREDICTED: similar to CG8669-PA, isoform A isoform 1 -
           Tribolium castaneum
          Length = 318

 Score = 39.1 bits (87), Expect = 0.14
 Identities = 26/73 (35%), Positives = 40/73 (54%)
 Frame = +3

Query: 477 LQQLDSQCKQENIFSNWLEEKVDLPSIFENISEVPERVDPQPRQRF*LQSFVTSQPTEXL 656
           L  LD   K+E  F   L+EK+ LP+I +++ +    + P P +      +V +  T+ L
Sbjct: 66  LINLDELIKEEPSFL--LDEKI-LPNILDDVDQARAILPPPPTKL----EYVPNTDTQFL 118

Query: 657 LREFETVYGAVEL 695
           L+EFE VY  VEL
Sbjct: 119 LKEFENVYDVVEL 131


>UniRef50_UPI0000DD7C1D Cluster: PREDICTED: hypothetical protein;
           n=2; Homo/Pan/Gorilla group|Rep: PREDICTED: hypothetical
           protein - Homo sapiens
          Length = 352

 Score = 37.5 bits (83), Expect = 0.41
 Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = -3

Query: 717 LCGGVKCVTRQHHKPFRIPAAXLQWAARSQKTEARTAAGVVGPRVQELQKCFRR--SKGG 544
           +CGG    T     P  +P + +Q A   +K   RTAA   G RV+ L+K   R  ++G 
Sbjct: 218 VCGGRALPTHPEPPPRHLPTSPIQVAGAGEKPHGRTAALPKGSRVEPLRKTEGRLLARGA 277

Query: 543 QLFPLTS 523
           QL   TS
Sbjct: 278 QLAIRTS 284


>UniRef50_UPI00015B4E9A Cluster: PREDICTED: similar to activating
           transcription factor; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to activating transcription factor -
           Nasonia vitripennis
          Length = 434

 Score = 35.5 bits (78), Expect = 1.7
 Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 25/95 (26%)
 Frame = +3

Query: 483 QLDSQCKQENIFSNWLEEKVDLPSIFENISE----------VPERVDPQP---------- 602
           +L S  K+E+ F++WLEEK+DLP IFE +             P  V P P          
Sbjct: 69  ELKSWIKEES-FADWLEEKIDLP-IFEELPAPECGQNRAVVYPNIVKPPPQGQHVIIGQH 126

Query: 603 -----RQRF*LQSFVTSQPTEXLLREFETVYGAVE 692
                +Q+   Q  +    T+ LLREFETV G VE
Sbjct: 127 QQQQQQQQHQHQQLLQVDATQSLLREFETVLGDVE 161


>UniRef50_UPI0000D9D19D Cluster: PREDICTED: tubulin tyrosine
           ligase-like family, member 4 isoform 2; n=2;
           Catarrhini|Rep: PREDICTED: tubulin tyrosine ligase-like
           family, member 4 isoform 2 - Macaca mulatta
          Length = 970

 Score = 33.5 bits (73), Expect = 6.8
 Identities = 15/44 (34%), Positives = 27/44 (61%)
 Frame = +3

Query: 249 TMSASQKESWAAAIDLLTNDECRLLLEVEDFFNDDCDLLKNFPS 380
           T     ++ +A+ +D+LT D+ R+L+E+ED F+      + FPS
Sbjct: 757 TQKIPDQDFYASVLDVLTPDDVRILVEMEDEFSRRGQFERIFPS 800


>UniRef50_Q14679 Cluster: Tubulin--tyrosine ligase-like protein 4;
            n=26; Eumetazoa|Rep: Tubulin--tyrosine ligase-like
            protein 4 - Homo sapiens (Human)
          Length = 1199

 Score = 33.5 bits (73), Expect = 6.8
 Identities = 15/44 (34%), Positives = 27/44 (61%)
 Frame = +3

Query: 249  TMSASQKESWAAAIDLLTNDECRLLLEVEDFFNDDCDLLKNFPS 380
            T     ++ +A+ +D+LT D+ R+L+E+ED F+      + FPS
Sbjct: 986  TQKIPDQDFYASVLDVLTPDDVRILVEMEDEFSRRGQFERIFPS 1029


>UniRef50_P36132 Cluster: Putative glycoprotein endopeptidase KAE1;
           n=17; Eukaryota|Rep: Putative glycoprotein endopeptidase
           KAE1 - Saccharomyces cerevisiae (Baker's yeast)
          Length = 386

 Score = 33.5 bits (73), Expect = 6.8
 Identities = 15/34 (44%), Positives = 23/34 (67%)
 Frame = +2

Query: 119 HNIKMLAKMAPSQDKLVHLHKTPTSLDINPSGLL 220
           +NI+ LAK AP ++ LV L  T   +D++ SG+L
Sbjct: 210 YNIEQLAKKAPHKENLVELPYTVKGMDLSMSGIL 243


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 751,528,058
Number of Sequences: 1657284
Number of extensions: 14185673
Number of successful extensions: 37995
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 36574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37976
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 73373641369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)