Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_F23
         (839 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0061 + 31352703-31353037,31353145-31353274,31353708-313539...    31   0.86 
05_03_0373 - 13194723-13195847,13196219-13196809                       31   1.1  
06_03_0640 - 23059473-23060489,23060592-23060651,23063163-230632...    31   1.5  
08_02_0823 + 21557111-21557292,21557391-21557473,21557722-215578...    30   2.0  
10_08_0849 + 21040043-21040199,21040620-21040678,21040925-210424...    28   8.1  

>03_06_0061 +
           31352703-31353037,31353145-31353274,31353708-31353902,
           31354696-31354725,31355238-31355395,31355756-31355846,
           31355924-31355989,31356331-31356413,31356495-31356558,
           31356641-31356709,31356798-31356833
          Length = 418

 Score = 31.5 bits (68), Expect = 0.86
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +2

Query: 680 WCCRVTHLTPPXSPPGPATQLLLSY---PQQAHAQH*HLSSLARRR 808
           WC   + L P  + P    +LLLS    P+ AH  H H +S  RRR
Sbjct: 3   WCAARSRLLPLATAPQLLRRLLLSSAAAPRYAHPHHHHSNSRRRRR 48


>05_03_0373 - 13194723-13195847,13196219-13196809
          Length = 571

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -1

Query: 470 VSEFGGTWFQLRR*WRVETRGVIDFDLRCSAR 375
           V+E G  + QL+R WR + RG++D D R   R
Sbjct: 502 VNEAGQRFLQLQREWRSDARGIVDGDGRFKFR 533


>06_03_0640 - 23059473-23060489,23060592-23060651,23063163-23063283,
            23063476-23065496
          Length = 1072

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 707  PPXSPPGPATQLLLSYPQQAHAQH*HLSSL 796
            PP  PPGP  Q + +Y QQ   Q  H  S+
Sbjct: 952  PPLPPPGPVHQQMHAYHQQHQQQQQHYQSI 981


>08_02_0823 +
           21557111-21557292,21557391-21557473,21557722-21557810,
           21557985-21558058,21558264-21558314,21558406-21558482,
           21560206-21560900
          Length = 416

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +1

Query: 667 SKRFMVLSSYAFNTAAXSAGTRDSVASELPSTSTCTALAPQ-LPGXP 804
           S +F  +   A   AA S+G+  S +++ PS+S+ ++L+P  LP  P
Sbjct: 301 SPKFKEIIEQAAAAAASSSGSSSSSSTDSPSSSSSSSLSPSPLPSPP 347


>10_08_0849 +
           21040043-21040199,21040620-21040678,21040925-21042494,
           21042583-21042710,21042793-21043033,21043160-21043710
          Length = 901

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 11/40 (27%), Positives = 24/40 (60%)
 Frame = +3

Query: 474 LLQQLDSQCKQENIFSNWLEEKVDLPSIFENISEVPERVD 593
           L+ +L   C ++N+   +LE+++  P +FE +    +R+D
Sbjct: 754 LVLELSELCAEQNLEVWYLEDELISPCMFEELQNQGDRID 793


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,621,128
Number of Sequences: 37544
Number of extensions: 402966
Number of successful extensions: 1085
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1082
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)