Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_F20
         (844 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.2  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   9.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.2  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = -2

Query: 690 QDHIVFVSGFSRTSLADE*AKVTSSLNLSAVFRNSPFRSDSFSKNPTTTTSSLE 529
           ++ I  VSG    +L D       ++ + A   +SPF S   S N   T S LE
Sbjct: 206 EERISVVSGLHEATLTDLALGENYTVQIMAKSESSPFESLKKSLN-FRTPSCLE 258


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +3

Query: 372 CPDILH*KYSEKESFLPSTM 431
           CP+  +  Y+++  ++PSTM
Sbjct: 606 CPEGFNEFYNQRRRWMPSTM 625


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +3

Query: 372 CPDILH*KYSEKESFLPSTM 431
           CP+  +  Y+++  ++PSTM
Sbjct: 839 CPEGFNEFYNQRRRWMPSTM 858


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +3

Query: 372 CPDILH*KYSEKESFLPSTM 431
           CP+  +  Y+++  ++PSTM
Sbjct: 839 CPEGFNEFYNQRRRWMPSTM 858


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,924
Number of Sequences: 336
Number of extensions: 3814
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)