Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_F19
         (860 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0775 + 31681720-31681953,31682106-31682246,31682357-316824...    29   3.6  
01_06_0660 + 30969879-30970218,30970346-30970514,30971373-309716...    29   3.6  
07_03_1302 + 25618621-25620495                                         28   8.3  

>02_05_0775 +
           31681720-31681953,31682106-31682246,31682357-31682428,
           31682513-31682590,31682683-31682736,31682862-31682963,
           31683112-31683189,31683322-31683391,31683592-31683662,
           31683826-31683918,31684029-31684109
          Length = 357

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 22/67 (32%), Positives = 31/67 (46%)
 Frame = -2

Query: 715 WAXAXRGHSPRRFSXTSPGCREXRMWHRTSYSSASSRFRREKFSSAASRSLGKLNAIAIF 536
           WA A R  SP R S ++    E   W R   S+ S      KF   A++S GK   I +F
Sbjct: 52  WADAMRASSPTRSSRSASDVDEFTAWVRKHPSALS------KFEEIAAKSRGK--KIVMF 103

Query: 535 VFFYGNV 515
           + + G +
Sbjct: 104 MDYDGTL 110


>01_06_0660 +
           30969879-30970218,30970346-30970514,30971373-30971635,
           30971717-30971864,30972019-30972082,30972225-30972248
          Length = 335

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
 Frame = +2

Query: 461 KYTKATQYLCIQNQPQSAHVSVEKDK-DGYSVQLAKRTRGCGRELFTSE--PAAGRAVRG 631
           K++K T         +   +   +DK +GY+ Q  +   GCG+EL   E   A     +G
Sbjct: 86  KHSKTTSSTTTTTGAKRGFIDTVEDKTEGYNDQKQQARAGCGKELAVEEMIAAVSERKKG 145

Query: 632 SVPHP 646
             P P
Sbjct: 146 CCPPP 150


>07_03_1302 + 25618621-25620495
          Length = 624

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = -1

Query: 677 LLDLARLS*XQDVAQNLVQLGQQPVQ-T*KVLVRSLAFAWQVERYSHLCLFLRKRGL 510
           LL + ++    ++   +  LG +P   T  +L++     WQV+R   L   +R RG+
Sbjct: 372 LLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGI 428


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,480,816
Number of Sequences: 37544
Number of extensions: 370095
Number of successful extensions: 856
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)