Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_F19
         (860 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC045671-1|AAH45671.1|  412|Homo sapiens chromosome 2 open readi...    35   0.33 
AC013403-7|AAX93171.1|  412|Homo sapiens unknown protein.              35   0.33 

>BC045671-1|AAH45671.1|  412|Homo sapiens chromosome 2 open reading
           frame 53 protein.
          Length = 412

 Score = 35.1 bits (77), Expect = 0.33
 Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
 Frame = +2

Query: 494 QNQPQSAHVSVEKDKDGYSVQLAKRTRGCGRELFTSEPAAGRAVRGSVP-HPXLTTAWRG 670
           Q Q ++ H+  EK       Q  K T+ CG +L  S+P A +A    VP  P  T ++R 
Sbjct: 304 QGQARALHLLPEKRPKEAGPQ-GKATQACGHQLPASQPPAAQARADPVPGTPSQTRSFRS 362

Query: 671 XGESSR*VPSXRXSPP 718
            G  S   P     PP
Sbjct: 363 AGLQSPNSPRCFSGPP 378


>AC013403-7|AAX93171.1|  412|Homo sapiens unknown protein.
          Length = 412

 Score = 35.1 bits (77), Expect = 0.33
 Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
 Frame = +2

Query: 494 QNQPQSAHVSVEKDKDGYSVQLAKRTRGCGRELFTSEPAAGRAVRGSVP-HPXLTTAWRG 670
           Q Q ++ H+  EK       Q  K T+ CG +L  S+P A +A    VP  P  T ++R 
Sbjct: 304 QGQARALHLLPEKRPKEAGPQ-GKATQACGHQLPASQPPAAQARADPVPGTPSQTRSFRS 362

Query: 671 XGESSR*VPSXRXSPP 718
            G  S   P     PP
Sbjct: 363 AGLQSPNSPRCFSGPP 378


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,685,708
Number of Sequences: 237096
Number of extensions: 1878364
Number of successful extensions: 3794
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3794
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)