Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_F19
         (860 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92832-6|CAB07375.2|  572|Caenorhabditis elegans Hypothetical pr...    31   1.4  
U80033-2|AAM15608.1| 1009|Caenorhabditis elegans Hypothetical pr...    30   2.4  
U28741-7|AAO38645.1|  721|Caenorhabditis elegans Synapse defecti...    30   2.4  
U28741-6|AAO21428.1|  942|Caenorhabditis elegans Synapse defecti...    30   2.4  
U28741-5|AAO38644.1|  987|Caenorhabditis elegans Synapse defecti...    30   2.4  
AF546880-1|AAN38752.1|  942|Caenorhabditis elegans axon identity...    30   2.4  
U64848-12|AAY86244.1|  231|Caenorhabditis elegans Hypothetical p...    28   9.8  

>Z92832-6|CAB07375.2|  572|Caenorhabditis elegans Hypothetical
           protein F31D4.7 protein.
          Length = 572

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +3

Query: 171 CE*FTDNNRTLFSE-ENFLCETFLVIFIRTDLSDL 272
           CE   DNN   FSE E+ +CET +++ +   LSDL
Sbjct: 533 CEQIGDNNNEEFSEAESLICETEVLLEVGECLSDL 567


>U80033-2|AAM15608.1| 1009|Caenorhabditis elegans Hypothetical protein
            T23H2.3 protein.
          Length = 1009

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 16/57 (28%), Positives = 29/57 (50%)
 Frame = +2

Query: 407  WSDIRTLARQ*NIEAGGAKYTKATQYLCIQNQPQSAHVSVEKDKDGYSVQLAKRTRG 577
            W+ +  L  + +I+AGG  YT  T  + ++++ +    S  ++K G  V L   T G
Sbjct: 848  WTSVLNLVEK-HIQAGGHNYTSITGQVLVKDRQERVD-SFNQEKGGAQVMLLSLTAG 902


>U28741-7|AAO38645.1|  721|Caenorhabditis elegans Synapse defective
           protein 1, isoformc protein.
          Length = 721

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +2

Query: 593 FTSEPAAGRAVRGSVPHPXLTTAWRGXGESSR*VPSXRXSPPLYXLXCNSTYI 751
           F SEP+   +    VP P L +A     ES    P    S P+Y L  +ST +
Sbjct: 52  FASEPSDSVSRTARVPPPRLASATVRRTESFNSAPGVSTSAPMYTLPRSSTAV 104


>U28741-6|AAO21428.1|  942|Caenorhabditis elegans Synapse defective
           protein 1, isoformb protein.
          Length = 942

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +2

Query: 593 FTSEPAAGRAVRGSVPHPXLTTAWRGXGESSR*VPSXRXSPPLYXLXCNSTYI 751
           F SEP+   +    VP P L +A     ES    P    S P+Y L  +ST +
Sbjct: 250 FASEPSDSVSRTARVPPPRLASATVRRTESFNSAPGVSTSAPMYTLPRSSTAV 302


>U28741-5|AAO38644.1|  987|Caenorhabditis elegans Synapse defective
           protein 1, isoforma protein.
          Length = 987

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +2

Query: 593 FTSEPAAGRAVRGSVPHPXLTTAWRGXGESSR*VPSXRXSPPLYXLXCNSTYI 751
           F SEP+   +    VP P L +A     ES    P    S P+Y L  +ST +
Sbjct: 318 FASEPSDSVSRTARVPPPRLASATVRRTESFNSAPGVSTSAPMYTLPRSSTAV 370


>AF546880-1|AAN38752.1|  942|Caenorhabditis elegans axon identity
           specification proteinSYD-1 protein.
          Length = 942

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +2

Query: 593 FTSEPAAGRAVRGSVPHPXLTTAWRGXGESSR*VPSXRXSPPLYXLXCNSTYI 751
           F SEP+   +    VP P L +A     ES    P    S P+Y L  +ST +
Sbjct: 250 FASEPSDSVSRTARVPPPRLASATVRRTESFNSAPGVSTSAPMYTLPRSSTAV 302


>U64848-12|AAY86244.1|  231|Caenorhabditis elegans Hypothetical
           protein C50E3.14 protein.
          Length = 231

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = -3

Query: 486 KYCVAFVYLAPPASIFYCLANVRISDQTFFQEQISLC 376
           K+C A+VY+ P       + +    D T + ++++LC
Sbjct: 190 KFCCAYVYITPNVQYHGMVDDTMCYDLTIYLKKLALC 226


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,631,450
Number of Sequences: 27780
Number of extensions: 325247
Number of successful extensions: 708
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)