Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_F18
(854 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25538| Best HMM Match : Kinesin (HMM E-Value=0) 124 7e-29
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 36 0.042
SB_50638| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00033) 35 0.073
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037) 32 0.52
SB_24737| Best HMM Match : KID (HMM E-Value=0.096) 32 0.68
SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.68
SB_3044| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_41836| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.5e-07) 31 1.2
SB_37769| Best HMM Match : Endonuclease_5 (HMM E-Value=2.8) 31 1.2
SB_55554| Best HMM Match : AAA (HMM E-Value=0.022) 31 1.6
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 30 2.1
SB_47007| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_26151| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_4107| Best HMM Match : M (HMM E-Value=8e-22) 30 2.1
SB_24482| Best HMM Match : KID (HMM E-Value=0.045) 30 2.1
SB_57405| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19) 30 2.8
SB_22884| Best HMM Match : Tctex-1 (HMM E-Value=9.4e-26) 29 3.6
SB_40784| Best HMM Match : TGF_beta (HMM E-Value=6.40393e-43) 29 4.8
SB_32300| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_21143| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.42) 29 4.8
SB_58663| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_11059| Best HMM Match : KID (HMM E-Value=0.046) 29 6.4
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 29 6.4
>SB_25538| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 711
Score = 124 bits (300), Expect = 7e-29
Identities = 67/180 (37%), Positives = 103/180 (57%), Gaps = 1/180 (0%)
Frame = +1
Query: 148 AVASVVEDAAMQAKLEALYQQLDDKDEEINQHSQLVXXXXXXXXXXXXXIACTRRDYEAL 327
A S E + + L+ QLD++D+EI S ++ + +R D E L
Sbjct: 321 AAMSNAEKKKYENERSKLFLQLDERDDEIQSQSLIINQLKEQIAEQEESLKASRSDNERL 380
Query: 328 QGDMNRIXXXXXXXXXXXXXXLQALEELAVNYDQKSQEVDSKSRECDQLSEDLQSKQSAL 507
Q +N I LQALEELAVNYDQK QEVD+K++E D+L++++ +KQ L
Sbjct: 381 QTQINSIQAESETSKTEVKEVLQALEELAVNYDQKLQEVDAKNKENDKLNDEITTKQVEL 440
Query: 508 TSATAELQQLRDLSAHQRKRIAELLTNLLRDLAEIGAAVGGSELDFKL-NVXTVGKLEEE 684
+ T L+++RD S+ R+R+AE++ +L+ DL EIG +GGS + K NV GKL+++
Sbjct: 441 SKTTKALEEVRDSSSILRRRLAEMMNSLMTDLGEIGTVIGGSAAEVKKPNVNCTGKLDDD 500
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = +3
Query: 687 TVARLHIXKMKSEVKNIVHRCHSLE 761
TVAR+++ K+KSEVK++ +R +S E
Sbjct: 502 TVARIYVSKIKSEVKSLHNRYNSAE 526
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 35.9 bits (79), Expect = 0.042
Identities = 18/61 (29%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +1
Query: 400 LEELAVNYDQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQ-QLRDLSAHQRKRIAE 576
LEE ++++KS+E+ + ++EC+ L + L +K L+S E + L++L +++ E
Sbjct: 4503 LEETKESFERKSEELSAVTKECEALKKQLDNKSDQLSSLHDERELSLQNLQEQLKQKEFE 4562
Query: 577 L 579
L
Sbjct: 4563 L 4563
Score = 29.1 bits (62), Expect = 4.8
Identities = 24/118 (20%), Positives = 43/118 (36%)
Frame = +1
Query: 184 AKLEALYQQLDDKDEEINQHSQLVXXXXXXXXXXXXXIACTRRDYEALQGDMNRIXXXXX 363
++L+ YQ + ++ EI+ Q V ++ + Y Q D N
Sbjct: 4151 SQLQRKYQTKESENSEISGRLQAVRQKIVELERNNASLSASLEKY---QSDFNHTRQERD 4207
Query: 364 XXXXXXXXXLQALEELAVNYDQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQL 537
+ EELA + +++ K EC++L L+ A +QQL
Sbjct: 4208 KYQTANYTYNREKEELAQQNAELKMKLEVKVNECEELERTTSDLSKKLSQAELIVQQL 4265
>SB_50638| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00033)
Length = 311
Score = 35.1 bits (77), Expect = 0.073
Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Frame = +1
Query: 184 AKLEALYQQLDDKDEEINQH-SQLVXXXXXXXXXXXXXIACTRRDYEALQGDMNRIXXXX 360
AKL A Y++L+D+ +E+ + S + + + + YE L+ N
Sbjct: 121 AKLSAKYEELEDEKDEMQESLSDTIREKSREIRDLEADLEMSEQKYEDLKSSWNN---TE 177
Query: 361 XXXXXXXXXXLQALEELAVNYDQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLR 540
+QA EE+ + EV+ +R + L EDLQ K++ + ++LR
Sbjct: 178 LVTSDLQGELMQAREEVI----RAQSEVERLARMKEDLEEDLQEKENQMDHWKVLEEELR 233
Query: 541 DLSAHQRKRIAELL 582
+ ++R++ E+L
Sbjct: 234 N-GINEREKELEML 246
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 33.1 bits (72), Expect = 0.30
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Frame = +1
Query: 400 LEELAVNYDQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAE- 576
LEE A+ +K E+ + E L+ K + L++ LQQ RD++A + RI +
Sbjct: 1813 LEEKAIETMEKKLEIAEYAAGLKYKKESLEKKCAELSAEIQNLQQSRDVTAADKSRINDE 1872
Query: 577 ----LLTNLL--RDLAEIGAAVGGSELDFKLNVXTVGKLEEE 684
LTN DLAE A+ + D ++ +G ++ +
Sbjct: 1873 VCQLKLTNAKTEADLAETRNALRIEKQDIEVLKVKLGSMDRK 1914
>SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037)
Length = 1127
Score = 32.3 bits (70), Expect = 0.52
Identities = 18/74 (24%), Positives = 36/74 (48%)
Frame = +1
Query: 394 QALEELAVNYDQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIA 573
Q L L + +V +K + QLS +L+ + ++A AE+++L++ RK+
Sbjct: 317 QELSNLKSQLREMDGQVQNKHSDAVQLSRELEESRKETSNALAEVRELQNELVISRKKCK 376
Query: 574 ELLTNLLRDLAEIG 615
+ + R + IG
Sbjct: 377 DQGAEISRQSSHIG 390
>SB_24737| Best HMM Match : KID (HMM E-Value=0.096)
Length = 636
Score = 31.9 bits (69), Expect = 0.68
Identities = 32/148 (21%), Positives = 62/148 (41%), Gaps = 7/148 (4%)
Frame = +1
Query: 157 SVVEDAAMQAKLEALYQQLDDKDEEINQHSQLVXXXXXXXXXXXXXIACTRRDYEALQGD 336
SV+ED + ++ L ++L D++ + N+ + +A + E GD
Sbjct: 145 SVIEDR--EKSIDKLEKELKDQEAKHNRQKNTLEQT----------VAKMKEVMERKGGD 192
Query: 337 MNRIXXXXXXXXXXXXXXLQALEELAVNYDQKSQEVDSKSRECDQLSEDLQSKQSALT-- 510
N++ ++ E+L +++ +EVD+ R + ++ +Q ALT
Sbjct: 193 ANKVNARVAELEKELKEKTKSAEKLVKASEKREKEVDALKRALQDQDQVMEEQQDALTER 252
Query: 511 -----SATAELQQLRDLSAHQRKRIAEL 579
S T EL+ LRD + AE+
Sbjct: 253 QLGIESLTEELRTLRDQNTSTNSLSAEI 280
>SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2208
Score = 31.9 bits (69), Expect = 0.68
Identities = 22/77 (28%), Positives = 37/77 (48%)
Frame = +1
Query: 460 ECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRDLAEIGAAVGGSEL 639
E Q+S+ LQSK+ L + A Q+ + + QR + EL TN+ A+I S+
Sbjct: 1100 EKSQMSKKLQSKEDELATEKANSQKHTETLSSQRAKEKELHTNIKELEAKITTLTEESQA 1159
Query: 640 DFKLNVXTVGKLEEELQ 690
K + +L + +Q
Sbjct: 1160 KLKASSYEKHQLVKNIQ 1176
>SB_3044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 31.5 bits (68), Expect = 0.90
Identities = 19/80 (23%), Positives = 39/80 (48%)
Frame = +1
Query: 445 DSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRDLAEIGAAV 624
D +E ++L E+L ++SA +E+ D ++Q +++ L +L + E+ +
Sbjct: 634 DGGDKELNRLKEELTQVSKKVSSAVSEMSDTPDNVSNQVEKVVNELKSLKKKHEELENSS 693
Query: 625 GGSELDFKLNVXTVGKLEEE 684
G+E K + LE+E
Sbjct: 694 KGAERRSKEAEKRIENLEQE 713
>SB_41836| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.5e-07)
Length = 1128
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = +1
Query: 394 QALEELAVNYDQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIA 573
+ EE+ + QKS+++ S L++ LQ + L S E+ +LR + + IA
Sbjct: 181 EMFEEMLLQEKQKSKDLASSEENLQNLNKTLQDE---LNSKNEEIGKLRPMLTERDSMIA 237
Query: 574 ELLTNL 591
EL + L
Sbjct: 238 ELRSEL 243
>SB_37769| Best HMM Match : Endonuclease_5 (HMM E-Value=2.8)
Length = 651
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = +1
Query: 445 DSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELL----TNLLRDLAE 609
+++ R+C + EDL+ K+ L+ A LQ D A++ + A+L +N LR A+
Sbjct: 571 ENRKRKCKEREEDLEEKRMRLSCEIASLQLDTDKFANEAEETAQLFLLTKSNALRKCAK 629
>SB_55554| Best HMM Match : AAA (HMM E-Value=0.022)
Length = 1681
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/60 (23%), Positives = 32/60 (53%)
Frame = +1
Query: 391 LQALEELAVNYDQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRI 570
L+ ++E + + D+ QE+D + D+ +++ Q ++ ++ E Q R+ HQ + I
Sbjct: 1614 LKRIDEASRSLDKMQQELDQLAPVYDEAQAGVKACQQSVENSQKEYQDQREACKHQEQEI 1673
>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
Length = 2122
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/87 (21%), Positives = 39/87 (44%)
Frame = +1
Query: 430 KSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRDLAE 609
+ + + + +E + DL + L+ + AEL+ + A + I L LL +
Sbjct: 1309 QEEAMQTLKKEKSSMKTDLDNTNKKLSKSKAELENYKKRVADLQVIIERLKQELLEKESS 1368
Query: 610 IGAAVGGSELDFKLNVXTVGKLEEELQ 690
+VGGSE + + + + ++LQ
Sbjct: 1369 SLVSVGGSEDELRRLRDKIARYRDDLQ 1395
>SB_47007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1174
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/83 (19%), Positives = 35/83 (42%)
Frame = +1
Query: 295 IACTRRDYEALQGDMNRIXXXXXXXXXXXXXXLQALEELAVNYDQKSQEVDSKSRECDQL 474
+A + E GD N++ ++ E+L + + +E+D+ R
Sbjct: 623 VAKMKEVMERKGGDANKVNARVAELEKELKEKTKSAEKLVKASENREKEIDALKRALQDQ 682
Query: 475 SEDLQSKQSALTSATAELQQLRD 543
+ ++ +Q ALT E++ L +
Sbjct: 683 DQVMEEQQDALTERQLEIESLTE 705
>SB_26151| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 30.3 bits (65), Expect = 2.1
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = +1
Query: 394 QALEELAVNYDQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQ-QLRDLSAHQRKRI 570
++ ++ V Y + E+D E LQS+ L+ A L+ QLRD S + K+
Sbjct: 79 ESFTDVEVTYQKFKVELDGVREEHRAEQNRLQSQIDNLSKQKASLEEQLRD-SKGETKKY 137
Query: 571 AELLTNLLRDLAEIGAAVGGSELDFKLNVXTVGKLEEE 684
+ L N R LAE G + + + K++ E
Sbjct: 138 QDDLLNTKRQLAETEWEKGSLTRELSSSKSIIEKMKTE 175
>SB_4107| Best HMM Match : M (HMM E-Value=8e-22)
Length = 2039
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 466 DQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRD 600
DQL+++LQ KQS LT + +++DL R ++ + L + RD
Sbjct: 1923 DQLAKELQKKQSYLTRTAQKSDEIKDL----RSKLEDSLNIVARD 1963
>SB_24482| Best HMM Match : KID (HMM E-Value=0.045)
Length = 1714
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/96 (20%), Positives = 42/96 (43%)
Frame = +1
Query: 403 EELAVNYDQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELL 582
++++ + + +S+ +S+ + + K L E Q+L + + IAEL+
Sbjct: 1343 KDISTSVEIESESENSEGEKLQMSIKTASEKMEQLRKEMQEKQELEETLRRKEDEIAELM 1402
Query: 583 TNLLRDLAEIGAAVGGSELDFKLNVXTVGKLEEELQ 690
T+ + +EI + E + V +LEE Q
Sbjct: 1403 TSTDKRFSEIQHELANIEAERDQLKDRVKRLEESKQ 1438
>SB_57405| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 71
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 120 KPPAPPXTSGCRQCCRRRRNAG 185
K PAPP C+ C R R NAG
Sbjct: 7 KVPAPPIRDSCQTCHRIRHNAG 28
>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
Length = 3107
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = +1
Query: 439 EVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNL 591
E+D + + +L +D+Q+ Q+ A L++ + S + K I +L N+
Sbjct: 831 ELDEEKAKATKLKKDMQAAQNEAAEARRTLERFKKESVSKEKTIMDLRANI 881
>SB_22884| Best HMM Match : Tctex-1 (HMM E-Value=9.4e-26)
Length = 439
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = -1
Query: 752 MASVDN-IFDFTFHFXDVETSHCNSSSSFPTVXTLSLKSSSDPPTAAPISARSRSKFVNN 576
++ DN I D+ + C S+SS P+ S P A P S SRS +
Sbjct: 286 LSKKDNEIVDYVMERPEATVKRCRSASSRPSTAASSQDGRQTPMRATPSSEGSRSP--KH 343
Query: 575 SAIRFR 558
+RF+
Sbjct: 344 KPVRFK 349
>SB_40784| Best HMM Match : TGF_beta (HMM E-Value=6.40393e-43)
Length = 1402
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +1
Query: 406 ELAVNYDQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLR 540
ELA YD K++E+D + + + K L SA ++++L+
Sbjct: 177 ELATRYDDKAKELDQLKEDLLAKTGFAEEKSKELNSAQTQIEKLK 221
>SB_32300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 676
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +1
Query: 406 ELAVNYDQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLR 540
ELA YD K++E+D + + + K L SA ++++L+
Sbjct: 483 ELATRYDDKAKELDQLKEDLLAKTGFAEEKSKELNSAQTQIEKLK 527
>SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3367
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/63 (23%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +1
Query: 400 LEELAVNYDQKSQEVDSKSRECDQ-LSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAE 576
+EEL + KSQE+++K+ +Q L + ++ +Q A ++ + H+++ I E
Sbjct: 3117 VEELQKSLSLKSQELEAKNALANQKLKQMVKDQQEAEKKKVTSMEIQTTIETHRKQTIIE 3176
Query: 577 LLT 585
+++
Sbjct: 3177 MVS 3179
>SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3259
Score = 29.1 bits (62), Expect = 4.8
Identities = 25/75 (33%), Positives = 41/75 (54%)
Frame = +1
Query: 394 QALEELAVNYDQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIA 573
+ LEE+ D+KS++++ ++E S+DL+ K +TS EL+ LS Q +R+
Sbjct: 2305 EQLEEMQFLLDKKSKKLERITKE----SKDLKEK---VTSLEEELR----LSNKQSERLT 2353
Query: 574 ELLTNLLRDLAEIGA 618
+ L RDL E A
Sbjct: 2354 SQVQRLERDLDEAAA 2368
>SB_21143| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.42)
Length = 870
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Frame = +1
Query: 436 QEVDSKSRECD-QLSEDLQSKQSALTSATAELQ----QLRDLSAHQRKRIAELLTNLLRD 600
QE ++++ + +L + L+S+ + + AE Q QL DLS RK + + +T R
Sbjct: 711 QETENRNMQARVELEQMLESQMNVVARLKAECQRLTQQLNDLSIKSRKELRDSVTERDRI 770
Query: 601 LAEIGAAVG-GSELDFKL 651
A++ + G EL+ L
Sbjct: 771 QAQLSSVKSKGKELEANL 788
>SB_58663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1008
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 394 QALEELAVNYDQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRD 543
+ALE ++ +K E+ +K + +QL ED++ Q L E+ ++ +
Sbjct: 566 KALETTQESWKEKETEMAAKLAQSEQLCEDMKDDQELLERLQDEIAKMEE 615
>SB_11059| Best HMM Match : KID (HMM E-Value=0.046)
Length = 296
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/83 (18%), Positives = 36/83 (43%)
Frame = +1
Query: 295 IACTRRDYEALQGDMNRIXXXXXXXXXXXXXXLQALEELAVNYDQKSQEVDSKSRECDQL 474
+A + E G+ N++ ++ E+L +++ +E+D+ R
Sbjct: 87 VAKMKEVMERKGGNANKVNARVAELEKELKEKTKSAEKLVKASEKREKEIDALKRALQDQ 146
Query: 475 SEDLQSKQSALTSATAELQQLRD 543
+ ++ +Q ALT E++ L +
Sbjct: 147 DQVMEEQQDALTERQLEIESLTE 169
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 424 DQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQL 537
D +E+D + E D+L DL + +S L S+ E ++L
Sbjct: 718 DSLKKEIDDLNNEIDELRSDLMNTKSLLQSSEDEKRKL 755
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,580,688
Number of Sequences: 59808
Number of extensions: 317727
Number of successful extensions: 1263
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1249
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2431332827
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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