Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_F18
         (854 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    27   0.55 
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         27   0.96 
AF020851-1|AAC31864.1|  214|Anopheles gambiae unknown protein.         25   3.9  
AF020850-1|AAC31863.1|  214|Anopheles gambiae unknown protein.         25   3.9  
AF020849-1|AAC31862.1|  214|Anopheles gambiae unknown protein.         25   3.9  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    25   3.9  
DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        24   6.8  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 27.5 bits (58), Expect = 0.55
 Identities = 16/68 (23%), Positives = 30/68 (44%)
 Frame = +1

Query: 451  KSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRDLAEIGAAVGG 630
            + R CD+  E+   +        A    ++D +   R ++AE L  +L+D+      +  
Sbjct: 1012 EGRRCDRCKENKYDRHQGCLDCPACYNLVQDAANDHRAKLAE-LNQILQDIQSKPIVIDD 1070

Query: 631  SELDFKLN 654
            SE   KL+
Sbjct: 1071 SEFAGKLH 1078


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 26.6 bits (56), Expect = 0.96
 Identities = 17/60 (28%), Positives = 27/60 (45%)
 Frame = +1

Query: 460 ECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRDLAEIGAAVGGSEL 639
           EC +L +   +  + +      ++QL  L A  RKR   L  NL   + +  +A GG  L
Sbjct: 446 ECKELEKSYHTFGAQIADVDERIKQLDGLLASVRKRTERL--NLKHKVVDNASAEGGGTL 503


>AF020851-1|AAC31864.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
 Frame = +1

Query: 424 DQKSQEVDSKSRECDQLSEDLQSKQSA-LTSATAELQQLRDLSAHQRKRIAELLTNLLRD 600
           +Q+S    SK   C + ++D+  K    LT +  E+QQLR  +  + +R   L  +    
Sbjct: 135 NQRSSS-SSKPTPCWESNKDVFPKPCGNLTDSEKEIQQLRGGTRSEGRRTPRLKRSSANS 193

Query: 601 LAEIGAAVGGSELD 642
            + +      SE D
Sbjct: 194 RSAVSITACNSERD 207


>AF020850-1|AAC31863.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
 Frame = +1

Query: 424 DQKSQEVDSKSRECDQLSEDLQSKQSA-LTSATAELQQLRDLSAHQRKRIAELLTNLLRD 600
           +Q+S    SK   C + ++D+  K    LT +  E+QQLR  +  + +R   L  +    
Sbjct: 135 NQRSSS-SSKPTPCWESNKDVFPKPCGNLTDSEKEIQQLRGGTRSEGRRTPRLKRSSANS 193

Query: 601 LAEIGAAVGGSELD 642
            + +      SE D
Sbjct: 194 RSAVSITACNSERD 207


>AF020849-1|AAC31862.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
 Frame = +1

Query: 424 DQKSQEVDSKSRECDQLSEDLQSKQSA-LTSATAELQQLRDLSAHQRKRIAELLTNLLRD 600
           +Q+S    SK   C + ++D+  K    LT +  E+QQLR  +  + +R   L  +    
Sbjct: 135 NQRSSS-SSKPTPCWESNKDVFPKPCGNLTDSEKEIQQLRGGTRSEGRRTPRLKRSSANS 193

Query: 601 LAEIGAAVGGSELD 642
            + +      SE D
Sbjct: 194 RSAVSITACNSERD 207


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -1

Query: 680 SSSFPTVXTLSLKSSSDPPTAAPISAR 600
           S  FPT   +S   SSD PT  P  +R
Sbjct: 461 SDLFPTHPPVSWPVSSDAPTTVPSDSR 487


>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 93  TPVTSFIEEKPPAPP 137
           TP  S +  +PPAPP
Sbjct: 56  TPAPSTVRPRPPAPP 70


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 642,482
Number of Sequences: 2352
Number of extensions: 9816
Number of successful extensions: 28
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90959220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)