Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_F18
(854 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L19120-1|AAA28155.1| 815|Caenorhabditis elegans kinesin heavy c... 62 4e-10
L07144-3|AAK21446.1| 815|Caenorhabditis elegans Uncoordinated p... 62 4e-10
AB017163-1|BAA32594.1| 815|Caenorhabditis elegans kinesin Heavy... 62 4e-10
Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 33 0.26
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 33 0.26
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 31 1.0
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 31 1.0
Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical p... 29 3.2
Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical p... 29 3.2
U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromos... 29 3.2
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 29 3.2
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 29 3.2
AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical ... 29 3.2
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 29 3.2
U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein ... 29 4.2
U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein. 29 4.2
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 29 4.2
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 29 4.2
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 29 4.2
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 29 4.2
U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical pr... 28 7.4
AF040644-5|AAD34647.1| 1032|Caenorhabditis elegans Hypothetical ... 28 7.4
Z50794-5|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical pr... 28 9.7
AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha ... 28 9.7
>L19120-1|AAA28155.1| 815|Caenorhabditis elegans kinesin heavy
chain protein.
Length = 815
Score = 62.5 bits (145), Expect = 4e-10
Identities = 38/134 (28%), Positives = 62/134 (46%)
Frame = +1
Query: 199 LYQQLDDKDEEINQHSQLVXXXXXXXXXXXXXIACTRRDYEALQGDMNRIXXXXXXXXXX 378
LYQQLD+KD+EI + SQ + + R + E ++ + NR
Sbjct: 438 LYQQLDEKDDEIQKVSQELEKLRQQVLLQEEALGTMRENEELIREENNRFQKEAEDKQQE 497
Query: 379 XXXXLQALEELAVNYDQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQ 558
+ ALEE+AVN D + E + RE + + ED QS + + AT+ L D +
Sbjct: 498 GKEMMTALEEIAVNLDVRQAECEKLKRELEVVQEDNQSLEDRMNQATSLLNAHLDECGPK 557
Query: 559 RKRIAELLTNLLRD 600
+ E + N++R+
Sbjct: 558 IRHFKEGIYNVIRE 571
>L07144-3|AAK21446.1| 815|Caenorhabditis elegans Uncoordinated
protein 116 protein.
Length = 815
Score = 62.5 bits (145), Expect = 4e-10
Identities = 38/134 (28%), Positives = 62/134 (46%)
Frame = +1
Query: 199 LYQQLDDKDEEINQHSQLVXXXXXXXXXXXXXIACTRRDYEALQGDMNRIXXXXXXXXXX 378
LYQQLD+KD+EI + SQ + + R + E ++ + NR
Sbjct: 438 LYQQLDEKDDEIQKVSQELEKLRQQVLLQEEALGTMRENEELIREENNRFQKEAEDKQQE 497
Query: 379 XXXXLQALEELAVNYDQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQ 558
+ ALEE+AVN D + E + RE + + ED QS + + AT+ L D +
Sbjct: 498 GKEMMTALEEIAVNLDVRQAECEKLKRELEVVQEDNQSLEDRMNQATSLLNAHLDECGPK 557
Query: 559 RKRIAELLTNLLRD 600
+ E + N++R+
Sbjct: 558 IRHFKEGIYNVIRE 571
>AB017163-1|BAA32594.1| 815|Caenorhabditis elegans kinesin Heavy
chain protein.
Length = 815
Score = 62.5 bits (145), Expect = 4e-10
Identities = 38/134 (28%), Positives = 62/134 (46%)
Frame = +1
Query: 199 LYQQLDDKDEEINQHSQLVXXXXXXXXXXXXXIACTRRDYEALQGDMNRIXXXXXXXXXX 378
LYQQLD+KD+EI + SQ + + R + E ++ + NR
Sbjct: 438 LYQQLDEKDDEIQKVSQELEKLRQQVLLQEEALGTMRENEELIREENNRFQKEAEDKQQE 497
Query: 379 XXXXLQALEELAVNYDQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQ 558
+ ALEE+AVN D + E + RE + + ED QS + + AT+ L D +
Sbjct: 498 GKEMMTALEEIAVNLDVRQAECEKLKRELEVVQEDNQSLEDRMNQATSLLNAHLDECGPK 557
Query: 559 RKRIAELLTNLLRD 600
+ E + N++R+
Sbjct: 558 IRHFKEGIYNVIRE 571
>Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical
protein F58G6.1 protein.
Length = 461
Score = 33.5 bits (73), Expect = 0.20
Identities = 13/41 (31%), Positives = 28/41 (68%)
Frame = +1
Query: 421 YDQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRD 543
+DQ + ++ +S+ C++L +D+++ SAL + + +QLRD
Sbjct: 35 FDQHAANLNKQSKSCEKLHKDVKNYSSALRTLLSAEKQLRD 75
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 33.1 bits (72), Expect = 0.26
Identities = 21/89 (23%), Positives = 41/89 (46%)
Frame = +1
Query: 424 DQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRDL 603
++K++E+ + + L E L + T EL++ DL + ++ +L N +
Sbjct: 437 EEKNKEISERDSSINDLKEKLAESEKKATKYKNELKEHADLVENLTLQLNKLQENSKDLM 496
Query: 604 AEIGAAVGGSELDFKLNVXTVGKLEEELQ 690
+I A GG+++ + KL ELQ
Sbjct: 497 EKISAGEGGAKMAIEQLEQEKVKLTNELQ 525
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 33.1 bits (72), Expect = 0.26
Identities = 21/89 (23%), Positives = 41/89 (46%)
Frame = +1
Query: 424 DQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRDL 603
++K++E+ + + L E L + T EL++ DL + ++ +L N +
Sbjct: 439 EEKNKEISERDSSINDLKEKLAESEKKATKYKNELKEHADLVENLTLQLNKLQENSKDLM 498
Query: 604 AEIGAAVGGSELDFKLNVXTVGKLEEELQ 690
+I A GG+++ + KL ELQ
Sbjct: 499 EKISAGEGGAKMAIEQLEQEKVKLTNELQ 527
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 33.1 bits (72), Expect = 0.26
Identities = 21/89 (23%), Positives = 41/89 (46%)
Frame = +1
Query: 424 DQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRDL 603
++K++E+ + + L E L + T EL++ DL + ++ +L N +
Sbjct: 439 EEKNKEISERDSSINDLKEKLAESEKKATKYKNELKEHADLVENLTLQLNKLQENSKDLM 498
Query: 604 AEIGAAVGGSELDFKLNVXTVGKLEEELQ 690
+I A GG+++ + KL ELQ
Sbjct: 499 EKISAGEGGAKMAIEQLEQEKVKLTNELQ 527
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 31.1 bits (67), Expect = 1.0
Identities = 29/89 (32%), Positives = 44/89 (49%)
Frame = +1
Query: 424 DQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRDL 603
D S E+D+ R+ QLS DL + +A EL + D + + K +A+ + +L L
Sbjct: 1474 DDLSSELDAAQRDNRQLSTDLFKAK----TANDELAEYLDSTRRENKSLAQEVKDLTDQL 1529
Query: 604 AEIGAAVGGSELDFKLNVXTVGKLEEELQ 690
E G +V +EL + V K EELQ
Sbjct: 1530 GEGGRSV--AELQKIVRKLEVEK--EELQ 1554
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 31.1 bits (67), Expect = 1.0
Identities = 29/89 (32%), Positives = 44/89 (49%)
Frame = +1
Query: 424 DQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRDL 603
D S E+D+ R+ QLS DL + +A EL + D + + K +A+ + +L L
Sbjct: 1474 DDLSSELDAAQRDNRQLSTDLFKAK----TANDELAEYLDSTRRENKSLAQEVKDLTDQL 1529
Query: 604 AEIGAAVGGSELDFKLNVXTVGKLEEELQ 690
E G +V +EL + V K EELQ
Sbjct: 1530 GEGGRSV--AELQKIVRKLEVEK--EELQ 1554
>Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Frame = +1
Query: 391 LQALEELAVNYDQKSQEV-DSKSRECDQLSEDLQSKQSALTSATAELQ----QLRDLSAH 555
LQA E +K + + + K +ECD+L E L + +AL A E + +L DL +
Sbjct: 837 LQATVEEMEKTIKKDEGIWEQKKKECDELEEKLPNAIAALKDAELEQKAAQAKLNDLKNN 896
Query: 556 QRK 564
QR+
Sbjct: 897 QRQ 899
>Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Frame = +1
Query: 391 LQALEELAVNYDQKSQEV-DSKSRECDQLSEDLQSKQSALTSATAELQ----QLRDLSAH 555
LQA E +K + + + K +ECD+L E L + +AL A E + +L DL +
Sbjct: 837 LQATVEEMEKTIKKDEGIWEQKKKECDELEEKLPNAIAALKDAELEQKAAQAKLNDLKNN 896
Query: 556 QRK 564
QR+
Sbjct: 897 QRQ 899
>U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromosome
and X-chromosomeassociated MIX-1 protein protein.
Length = 1244
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Frame = +1
Query: 391 LQALEELAVNYDQKSQEV-DSKSRECDQLSEDLQSKQSALTSATAELQ----QLRDLSAH 555
LQA E +K + + + K +ECD+L E L + +AL A E + +L DL +
Sbjct: 837 LQATVEEMEKTIKKDEGIWEQKKKECDELEEKLPNAIAALKDAELEQKAAQAKLNDLKNN 896
Query: 556 QRK 564
QR+
Sbjct: 897 QRQ 899
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +1
Query: 391 LQALEELAVNYDQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRD---LSAHQR 561
L+ L+ A QKS E D E D +S Q +A + LQQL + L +
Sbjct: 3713 LEKLKNEAAEVAQKSAETDKVMAEVDAVSAQYQRLSTACSHIYHTLQQLNEIHFLYHYSL 3772
Query: 562 KRIAELLTNLLR 597
+ E+ T++L+
Sbjct: 3773 DFLVEIFTHVLK 3784
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +1
Query: 391 LQALEELAVNYDQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRD---LSAHQR 561
L+ L+ A QKS E D E D +S Q +A + LQQL + L +
Sbjct: 3713 LEKLKNEAAEVAQKSAETDKVMAEVDAVSAQYQRLSTACSHIYHTLQQLNEIHFLYHYSL 3772
Query: 562 KRIAELLTNLLR 597
+ E+ T++L+
Sbjct: 3773 DFLVEIFTHVLK 3784
>AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Frame = +1
Query: 391 LQALEELAVNYDQKSQEV-DSKSRECDQLSEDLQSKQSALTSATAELQ----QLRDLSAH 555
LQA E +K + + + K +ECD+L E L + +AL A E + +L DL +
Sbjct: 837 LQATVEEMEKTIKKDEGIWEQKKKECDELEEKLPNAIAALKDAELEQKAAQAKLNDLKNN 896
Query: 556 QRK 564
QR+
Sbjct: 897 QRQ 899
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +1
Query: 436 QEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRD-LAEI 612
QEV + E QL ED+++++ L + A L + D +A + ++ ++ + L+D L ++
Sbjct: 3383 QEVPASLDEQKQLLEDVENQKHNLENLLANLPE-NDPTADELRQKSQWDLSRLKDLLKQL 3441
Query: 613 GAAVG 627
G+AVG
Sbjct: 3442 GSAVG 3446
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +1
Query: 436 QEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRD-LAEI 612
QEV + E QL ED+++++ L + A L + D +A + ++ ++ + L+D L ++
Sbjct: 4286 QEVPASLDEQKQLLEDVENQKHNLENLLANLPE-NDPTADELRQKSQWDLSRLKDLLKQL 4344
Query: 613 GAAVG 627
G+AVG
Sbjct: 4345 GSAVG 4349
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +1
Query: 436 QEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRD-LAEI 612
QEV + E QL ED+++++ L + A L + D +A + ++ ++ + L+D L ++
Sbjct: 5240 QEVPASLDEQKQLLEDVENQKHNLENLLANLPE-NDPTADELRQKSQWDLSRLKDLLKQL 5298
Query: 613 GAAVG 627
G+AVG
Sbjct: 5299 GSAVG 5303
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +1
Query: 436 QEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRD-LAEI 612
QEV + E QL ED+++++ L + A L + D +A + ++ ++ + L+D L ++
Sbjct: 6143 QEVPASLDEQKQLLEDVENQKHNLENLLANLPE-NDPTADELRQKSQWDLSRLKDLLKQL 6201
Query: 613 GAAVG 627
G+AVG
Sbjct: 6202 GSAVG 6206
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +1
Query: 436 QEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRD-LAEI 612
QEV + E QL ED+++++ L + A L + D +A + ++ ++ + L+D L ++
Sbjct: 7046 QEVPASLDEQKQLLEDVENQKHNLENLLANLPE-NDPTADELRQKSQWDLSRLKDLLKQL 7104
Query: 613 GAAVG 627
G+AVG
Sbjct: 7105 GSAVG 7109
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +1
Query: 436 QEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNLLRD-LAEI 612
QEV + E QL ED+++++ L + A L + D +A + ++ ++ + L+D L ++
Sbjct: 7949 QEVPASLDEQKQLLEDVENQKHNLENLLANLPE-NDPTADELRQKSQWDLSRLKDLLKQL 8007
Query: 613 GAAVG 627
G+AVG
Sbjct: 8008 GSAVG 8012
>U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein 502
protein.
Length = 1173
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +1
Query: 409 LAVNYDQKSQEVDSKSRE-CDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLT 585
++ Y+ + + SK R+ C+QL EDL+ K L E Q++ Q+K E
Sbjct: 516 MSKEYNSEMESELSKFRDKCEQLKEDLRKKSGELAQEKNETQRV----FQQKKDADEAFA 571
Query: 586 NLLRD 600
+ RD
Sbjct: 572 EIKRD 576
>U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein.
Length = 1173
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +1
Query: 409 LAVNYDQKSQEVDSKSRE-CDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLT 585
++ Y+ + + SK R+ C+QL EDL+ K L E Q++ Q+K E
Sbjct: 516 MSKEYNSEMESELSKFRDKCEQLKEDLRKKSGELAQEKNETQRV----FQQKKDADEAFA 571
Query: 586 NLLRD 600
+ RD
Sbjct: 572 EIKRD 576
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/82 (24%), Positives = 38/82 (46%)
Frame = +1
Query: 409 LAVNYDQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTN 588
+ + D K+ +D E D+L + L++++ E+ + R + +AE
Sbjct: 513 MKTDLDDKTLRLDMLETERDELKKKLETEREQADQRDLEIAECR----AKLDEMAEKEAE 568
Query: 589 LLRDLAEIGAAVGGSELDFKLN 654
L ++LAE A + E + KLN
Sbjct: 569 LRKELAEFQAIITAMEGEGKLN 590
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/82 (24%), Positives = 38/82 (46%)
Frame = +1
Query: 409 LAVNYDQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTN 588
+ + D K+ +D E D+L + L++++ E+ + R + +AE
Sbjct: 513 MKTDLDDKTLRLDMLETERDELKKKLETEREQADQRDLEIAECR----AKLDEMAEKEAE 568
Query: 589 LLRDLAEIGAAVGGSELDFKLN 654
L ++LAE A + E + KLN
Sbjct: 569 LRKELAEFQAIITAMEGEGKLN 590
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/82 (24%), Positives = 38/82 (46%)
Frame = +1
Query: 409 LAVNYDQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTN 588
+ + D K+ +D E D+L + L++++ E+ + R + +AE
Sbjct: 273 MKTDLDDKTLRLDMLETERDELKKKLETEREQADQRDLEIAECR----AKLDEMAEKEAE 328
Query: 589 LLRDLAEIGAAVGGSELDFKLN 654
L ++LAE A + E + KLN
Sbjct: 329 LRKELAEFQAIITAMEGEGKLN 350
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/82 (24%), Positives = 38/82 (46%)
Frame = +1
Query: 409 LAVNYDQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTN 588
+ + D K+ +D E D+L + L++++ E+ + R + +AE
Sbjct: 513 MKTDLDDKTLRLDMLETERDELKKKLETEREQADQRDLEIAECR----AKLDEMAEKEAE 568
Query: 589 LLRDLAEIGAAVGGSELDFKLN 654
L ++LAE A + E + KLN
Sbjct: 569 LRKELAEFQAIITAMEGEGKLN 590
>U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical
protein F59A6.5 protein.
Length = 1286
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +1
Query: 421 YDQKSQEVDSKSRECDQLSEDLQSKQSALTSATAELQQLRDLSAHQRKRIAELLTNL 591
+D+ QE++ +E D D+Q + + ELQ L L A + ++I EL T +
Sbjct: 357 FDKLKQELE---KERDDALADVQKIREVKRNVERELQSLTSLMAERDEQIEELKTKM 410
>AF040644-5|AAD34647.1| 1032|Caenorhabditis elegans Hypothetical
protein H04J21.1 protein.
Length = 1032
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 394 QALEELAVNYDQKSQEVDSKSRECDQLSEDLQS-KQSALTSATAELQQLRDLSAH 555
+ LE+L D+K ++ KS++ + +E + K SA+T+ T QQL L +H
Sbjct: 885 EKLEDLEKPVDKKKKK-GKKSKDSKKSAEKKSTEKSSAMTAPTNSAQQLEVLHSH 938
>Z50794-5|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical
protein F59F5.6 protein.
Length = 1139
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 391 LQALEELAVNYDQKSQEVDSKSREC-DQLSEDLQSKQSALTSATAELQQLRDLSAHQRKR 567
L+ ++ N ++S E+ +++ E DQL+ED + K +A S Q+ +L A + +
Sbjct: 249 LERMKTELANSLKQSTEITTRNAELEDQLTEDAREKHAAQESIVRLKNQICELDAQRTDQ 308
Query: 568 IAELLT 585
+ T
Sbjct: 309 ETRITT 314
>AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha
homolog SYD-2 protein.
Length = 1139
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 391 LQALEELAVNYDQKSQEVDSKSREC-DQLSEDLQSKQSALTSATAELQQLRDLSAHQRKR 567
L+ ++ N ++S E+ +++ E DQL+ED + K +A S Q+ +L A + +
Sbjct: 249 LERMKTELANSLKQSTEITTRNAELEDQLTEDAREKHAAQESIVRLKNQICELDAQRTDQ 308
Query: 568 IAELLT 585
+ T
Sbjct: 309 ETRITT 314
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,468,299
Number of Sequences: 27780
Number of extensions: 235377
Number of successful extensions: 959
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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