Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_F16
         (893 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    25   1.1  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    24   1.8  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   9.9  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/24 (41%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
 Frame = -3

Query: 504 YNTLFSW-ISYDTFHGMCFPRTCL 436
           Y    +W I  D FHG+C P+  L
Sbjct: 363 YGGAMTWAIDMDDFHGLCGPKNPL 386


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 8/25 (32%), Positives = 11/25 (44%)
 Frame = +3

Query: 558 WXXILKCHILKSIWTRSEXCSMXSK 632
           W     C ++  +W  SE C   SK
Sbjct: 330 WAFSNACEVMAIVWITSETCEEVSK 354


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 6/20 (30%), Positives = 9/20 (45%)
 Frame = +3

Query: 558 WXXILKCHILKSIWTRSEXC 617
           W     C ++  +W  SE C
Sbjct: 330 WAFSNACEVMAIVWITSETC 349


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,719
Number of Sequences: 336
Number of extensions: 3952
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24823920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)