Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_F12
         (854 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    27   0.14 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    25   0.58 
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    22   5.4  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   7.1  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   9.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.4  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 27.5 bits (58), Expect = 0.14
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
 Frame = +2

Query: 554 SNTQYTYLNLTPLKRKYLMKSRSTLTSLTKPK----SKCPLPTPLRRKSL 691
           S+TQ  YL L+     YL+ ++  L   +KPK     K PLP  L  K L
Sbjct: 13  SSTQPNYLILSNKNNTYLVLNKYLLVKHSKPKMPLLPKTPLPLTLLYKLL 62


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 25.4 bits (53), Expect = 0.58
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 491 KCPYLSPTPSKRKFPLPSRNTSNTQYTY 574
           K P  +P+PS     LP++ TS +  TY
Sbjct: 69  KSPQGAPSPSSTPSSLPTQRTSTSNPTY 96


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -3

Query: 660 GHFDFGFVRLVNVDLDFIRYFLFNGVRFRYVYWVFDVF 547
           G F FG + L  V    ++        FR+VY V+++F
Sbjct: 40  GQF-FGIMPLHGVSRKNVQEIRLEWKSFRFVYAVYNIF 76


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 618 LDFIRYFLFNGVRFRYVY 565
           +DF+R F FNG+   + Y
Sbjct: 624 IDFLREFQFNGLDVDWEY 641



 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 607 YEVKVHVDKPYEAKV 651
           Y+VK+  D PYE  +
Sbjct: 886 YKVKLEYDGPYETSI 900


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = +1

Query: 625 VDKPYEAKVKVPTPYTVEKK-IPYEVKV-PVPQPYTV-EKKVQFQ*NTKXGAXP 777
           +D PY+ K +VPT  +     +  +V + PV +P  +  +K+  +  TK    P
Sbjct: 213 LDFPYQGKFEVPTKSSPRSSPVQSDVSLSPVHEPLLITTEKLAAEGQTKLPQQP 266


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -1

Query: 428 TGTFFTTSTVLMCSW 384
           TG FFT   VLM  W
Sbjct: 426 TGPFFTFCNVLMEMW 440


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,858
Number of Sequences: 336
Number of extensions: 3137
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23659332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)