Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_F12
(854 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_3455| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.042
SB_53317| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_15995| Best HMM Match : DUF1388 (HMM E-Value=3.9e-12) 34 0.17
SB_11849| Best HMM Match : DUF1388 (HMM E-Value=3.9e-12) 34 0.17
SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098) 33 0.30
SB_28906| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.39
SB_13341| Best HMM Match : PMG (HMM E-Value=2.8) 33 0.39
SB_54456| Best HMM Match : EGF (HMM E-Value=2.3e-31) 32 0.52
SB_52115| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 32 0.68
SB_38058| Best HMM Match : TP2 (HMM E-Value=0.072) 31 1.2
SB_24471| Best HMM Match : Lectin_C (HMM E-Value=2.7e-12) 31 1.6
SB_36326| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_46725| Best HMM Match : Extensin_2 (HMM E-Value=1.9) 30 2.8
SB_54589| Best HMM Match : Extensin_2 (HMM E-Value=0.0081) 29 3.6
SB_35343| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_1477| Best HMM Match : RVT_1 (HMM E-Value=0.00065) 29 3.6
SB_40538| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_10368| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_3371| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_58777| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_31463| Best HMM Match : ABC2_membrane (HMM E-Value=3.1) 29 6.4
SB_59467| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_44033| Best HMM Match : SRCR (HMM E-Value=1.3) 28 8.4
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 28 8.4
SB_8814| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_3455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 587
Score = 35.9 bits (79), Expect = 0.042
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +1
Query: 601 VPYEVKVHVDKPYEAKVKVPTPYTVE-----KKIPYEVKVPVPQPYTVEK 735
VP+ + VH P KV +P PY V K +PY V VPV QP +++
Sbjct: 457 VPFPIPVH-SPPQIEKVPIPFPYPVPSPPQIKPMPYPVPVPVRQPPMIQR 505
>SB_53317| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 571
Score = 34.3 bits (75), Expect = 0.13
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = +1
Query: 598 KVPYEVKVHVDKPYEAKVKVPTPYTVEKK--IPYEVKVPVPQPYTVEKKVQFQ*NT-KXG 768
+ PY + PY + + TPYT K+ PY K PYT K+ Q T K G
Sbjct: 233 QTPYITRKRGQTPYITRKRGQTPYTTRKRGQTPYITKKRGQTPYTTRKRGQTPYITRKRG 292
Query: 769 AXPY 780
PY
Sbjct: 293 QTPY 296
Score = 32.7 bits (71), Expect = 0.39
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = +1
Query: 598 KVPYEVKVHVDKPYEAKVKVPTPYTVEKK--IPYEVKVPVPQPYTVEKKVQFQ*NT-KXG 768
+ PY + PY K + TPYT K+ PY + PY K+ Q T K G
Sbjct: 253 QTPYTTRKRGQTPYITKKRGQTPYTTRKRGQTPYITRKRGQTPYITRKRGQTPYITRKRG 312
Query: 769 AXPY 780
PY
Sbjct: 313 QTPY 316
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = +1
Query: 598 KVPYEVKVHVDKPYEAKVKVPTPYTVEKK--IPYEVKVPVPQPYTVEKKVQFQ*NT-KXG 768
+ PY + PY + + TPY K+ PY + PY +K+ Q T K G
Sbjct: 223 QTPYITRKRGQTPYITRKRGQTPYITRKRGQTPYTTRKRGQTPYITKKRGQTPYTTRKRG 282
Query: 769 AXPY 780
PY
Sbjct: 283 QTPY 286
Score = 28.3 bits (60), Expect = 8.4
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Frame = +1
Query: 598 KVPYEVKVHVDKPYEAKVKVPTPYTVEKK--IPYEVKVPVPQPYTVEKKVQFQ*NT-KXG 768
+ PY + PY + + TPY K+ PY + PY K+ Q T K G
Sbjct: 293 QTPYITRKRGQTPYITRKRGQTPYITRKRGQTPYITRKRGQTPYITRKRGQTPYITRKRG 352
Query: 769 AXPY 780
PY
Sbjct: 353 QTPY 356
Score = 28.3 bits (60), Expect = 8.4
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Frame = +1
Query: 598 KVPYEVKVHVDKPYEAKVKVPTPYTVEKK--IPYEVKVPVPQPYTVEKKVQFQ*NT-KXG 768
+ PY + PY + + TPY K+ PY + PY K+ Q T K G
Sbjct: 333 QTPYITRKRGQTPYITRKRGQTPYITRKRGQTPYITRKRGQTPYITRKRGQTPYITRKRG 392
Query: 769 AXPY 780
PY
Sbjct: 393 QTPY 396
>SB_15995| Best HMM Match : DUF1388 (HMM E-Value=3.9e-12)
Length = 1108
Score = 33.9 bits (74), Expect = 0.17
Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +1
Query: 598 KVPYEVKVHVDKPYEAKVKVPTPYTV--EKKIPYEVKVP 708
KVP EVKV + +VKVP + V E K+P EVKVP
Sbjct: 988 KVPDEVKVPDEDKVPDEVKVPDEFKVPDEVKVPDEVKVP 1026
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 598 KVPYEVKVHVDKPYEAKVKVPTPYTV--EKKIPYEVKVPVPQPYTVE 732
KVP EVKV + +VKVP V E K+P EVKV P E
Sbjct: 1000 KVPDEVKVPDEFKVPDEVKVPDEVKVPDEVKVPDEVKVSDKAPEKAE 1046
>SB_11849| Best HMM Match : DUF1388 (HMM E-Value=3.9e-12)
Length = 359
Score = 33.9 bits (74), Expect = 0.17
Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +1
Query: 598 KVPYEVKVHVDKPYEAKVKVPTPYTV--EKKIPYEVKVP 708
KVP EVKV + +VKVP + V E K+P EVKVP
Sbjct: 239 KVPDEVKVPDEDKVPDEVKVPDEFKVPDEVKVPDEVKVP 277
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 598 KVPYEVKVHVDKPYEAKVKVPTPYTV--EKKIPYEVKVPVPQPYTVE 732
KVP EVKV + +VKVP V E K+P EVKV P E
Sbjct: 251 KVPDEVKVPDEFKVPDEVKVPDEVKVPDEVKVPDEVKVSDKAPEKAE 297
>SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098)
Length = 620
Score = 33.1 bits (72), Expect = 0.30
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Frame = +2
Query: 422 CLFRIQSRNTSPI----PSRRKYPMR*KCPYLSPTPSKRKFPLPSRNTSNTQYTYLNLTP 589
CLF I + SP+ P P+ P SP+P PL S + + + +P
Sbjct: 161 CLFSISAYFPSPLTSSSPLTSSSPLTSPSPLTSPSPLTSSSPLTSSSPLTSSSPLTSSSP 220
Query: 590 LKRKYLMKSRSTLTSLTKPKSKCPL 664
L + S S LTS + S PL
Sbjct: 221 LTSSSPLTSPSPLTSSSPLTSSSPL 245
Score = 33.1 bits (72), Expect = 0.30
Identities = 22/75 (29%), Positives = 31/75 (41%)
Frame = +2
Query: 449 TSPIPSRRKYPMR*KCPYLSPTPSKRKFPLPSRNTSNTQYTYLNLTPLKRKYLMKSRSTL 628
TSP P P+ P S +P PL S + + + +PL + S S L
Sbjct: 186 TSPSPLTSPSPLTSSSPLTSSSPLTSSSPLTSSSPLTSSSPLTSPSPLTSSSPLTSSSPL 245
Query: 629 TSLTKPKSKCPLPTP 673
TS + S PL +P
Sbjct: 246 TSSSPLTSSSPLTSP 260
Score = 33.1 bits (72), Expect = 0.30
Identities = 22/75 (29%), Positives = 31/75 (41%)
Frame = +2
Query: 449 TSPIPSRRKYPMR*KCPYLSPTPSKRKFPLPSRNTSNTQYTYLNLTPLKRKYLMKSRSTL 628
TSP P P+ P S +P PL S + + + +PL + S S L
Sbjct: 192 TSPSPLTSSSPLTSSSPLTSSSPLTSSSPLTSSSPLTSPSPLTSSSPLTSSSPLTSSSPL 251
Query: 629 TSLTKPKSKCPLPTP 673
TS + S PL +P
Sbjct: 252 TSSSPLTSPSPLTSP 266
>SB_28906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1191
Score = 32.7 bits (71), Expect = 0.39
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 7/61 (11%)
Frame = -3
Query: 618 LDFIRYFLFNGVRFRYVYWVF-------DVFLDGKGNFLFDGVGLRYGHFHLIGYFLLDG 460
L + YF GVR+R + W D D G + L YGH ++ Y LLDG
Sbjct: 724 LQRVSYFRNTGVRWRSLSWKLNSTFDWEDAIQDAMGTSMSLAKALYYGHVYVAQYPLLDG 783
Query: 459 I 457
I
Sbjct: 784 I 784
>SB_13341| Best HMM Match : PMG (HMM E-Value=2.8)
Length = 157
Score = 32.7 bits (71), Expect = 0.39
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 604 PYEVKVHVDKPYEAKVKVPTPYTVEKKIPYEVKVPVPQPYTVEKKVQF 747
PY + V PY +V +PY++ + Y+ P+ YT K +Q+
Sbjct: 52 PYSMATRVISPYSMATRVTSPYSMATRYGYKGYKPLQYGYTGYKPLQY 99
>SB_54456| Best HMM Match : EGF (HMM E-Value=2.3e-31)
Length = 491
Score = 32.3 bits (70), Expect = 0.52
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 598 KVPYEVKVHVDKPYEAKVKVPTPYTVEKKIPYEVKVPVPQP 720
+VP+ V V+ + ++ P P+ V + I + V+VP P P
Sbjct: 265 RVPFPVMVNRPVHHTERIPFPVPFVVNRPIHHTVQVPYPVP 305
Score = 31.9 bits (69), Expect = 0.68
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +1
Query: 601 VPYEVKVHVDKPYEAKVKVPTPYTVEKKIPYEVKVPVPQPYTVEKKV 741
+P+ + VD P +VP P V + + + ++P P P+ V + +
Sbjct: 248 MPFSNMMAVDAPVHHVDRVPFPVMVNRPVHHTERIPFPVPFVVNRPI 294
>SB_52115| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 32.3 bits (70), Expect = 0.52
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +1
Query: 604 PYEVKVHVDKPYEAKVKVPTPYTVE--KKIPYEVKVPVPQPYTVE 732
PYE +V +PYE +V PY E + PYE +V +PY E
Sbjct: 24 PYECEVFGQRPYECEVFGQRPYECEVFGQRPYECEVFGQRPYECE 68
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 31.9 bits (69), Expect = 0.68
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 604 PYEVKVHVDKPYEAKVKVPTPYTVEKKIPYEVKVPVP 714
P + H P+ +V V P+ V ++P V+VPVP
Sbjct: 204 PIIIHHHHHHPFPVRVPVRVPFRVPVRVPVPVRVPVP 240
>SB_38058| Best HMM Match : TP2 (HMM E-Value=0.072)
Length = 399
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +1
Query: 598 KVPYEVKVHVDKPYEAKVKVPTPY--TVEKKIPYEVKVPVPQPYTVEKKV 741
KVP KV V+ KVP Y +V K+P K PV +V KV
Sbjct: 87 KVPVNYKVPVNYKVSVNYKVPVNYKVSVNYKVPVNYKFPVNYKVSVNYKV 136
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +1
Query: 601 VPYEVKVHVDKPYEAKVKVPTPYTVEKKIPYEVKVPVPQPYTVEKKV 741
V Y+V V+ P KV V V K+P KVPV + V KV
Sbjct: 114 VNYKVPVNYKFPVNYKVSVNYKVPVNYKVPVNYKVPVNYKFPVNYKV 160
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +1
Query: 598 KVPYEVKVHVDKPYEAKVKVPTPY--TVEKKIPYEVKVPVPQPYTVEKKVQFQ*NTK 762
KVP KV V+ K P Y +V K+P KVPV Y V +F N K
Sbjct: 105 KVPVNYKVSVNYKVPVNYKFPVNYKVSVNYKVPVNYKVPV--NYKVPVNYKFPVNYK 159
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 598 KVP--YEVKVHVDKPYEAKVKVPTPYTVEKKIPYEVKVPVPQPYTVEKKVQ 744
KVP Y+V V+ P KV V + V K+ KVP+ V K+Q
Sbjct: 141 KVPVNYKVPVNYKFPVNYKVSVNYKFIVNYKVSVNYKVPLNYKVPVNTKIQ 191
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +1
Query: 601 VPYEVKVHVDKPYEAKVKVPTPYTVEKKIPYEVKVPVPQPYTVEKKV 741
V Y+V V+ P KV V V K+ KVPV + V KV
Sbjct: 84 VNYKVPVNYKVPVNYKVSVNYKVPVNYKVSVNYKVPVNYKFPVNYKV 130
>SB_24471| Best HMM Match : Lectin_C (HMM E-Value=2.7e-12)
Length = 695
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 625 VDKPYEAKVKVPTPYTVEKKIPYEVKVPVPQPY 723
V+KP +A+ +P P + PY+ + P P PY
Sbjct: 496 VEKPGKAQPSLPNPQSTISYQPYQSQYPYPYPY 528
>SB_36326| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 566 YTYLNLTPLKRKYLMKSRSTLTSLTKPKSKCPLPTPLRRKS 688
Y Y +T LK L K TL+S+ +P P+PL+RK+
Sbjct: 329 YMYA-ITTLKNNCLRKEELTLSSIFRPVPLHEAPSPLKRKT 368
>SB_46725| Best HMM Match : Extensin_2 (HMM E-Value=1.9)
Length = 496
Score = 29.9 bits (64), Expect = 2.8
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Frame = +2
Query: 437 QSRNTSPIPSRRKYPMR*KCPYLSPTPSKRKFPLPSRNTSNTQYTYLNLTPLKRKYLMKS 616
Q+R P+PS P R + P L PTPS LPS S T+ L L+KS
Sbjct: 143 QTRPAMPLPS----PSRSEMP-LPPTPSSSSESLPSGTKSPTK----PLRSRSSDELVKS 193
Query: 617 RSTLTS---LTKPKSKCPLPTPLRRKSLTK 697
S + + +P+++ P P R S +K
Sbjct: 194 NSESSKSNPVPRPRNRPPPPPGASRSSASK 223
>SB_54589| Best HMM Match : Extensin_2 (HMM E-Value=0.0081)
Length = 667
Score = 29.5 bits (63), Expect = 3.6
Identities = 22/88 (25%), Positives = 40/88 (45%)
Frame = +2
Query: 416 RRCLFRIQSRNTSPIPSRRKYPMR*KCPYLSPTPSKRKFPLPSRNTSNTQYTYLNLTPLK 595
RR F + S ++ P P R+Y +C S +P + F P+ ++ +++ +
Sbjct: 278 RRATFTVGSPSSPPTPRTRRYSSGSRCSPSSQSP--QDFHQPAGHSPHSRPIRRTHSSSS 335
Query: 596 RKYLMKSRSTLTSLTKPKSKCPLPTPLR 679
T+T ++KP S P+P P R
Sbjct: 336 PGVPPSPPPTMTIVSKPTS-TPVPVPRR 362
>SB_35343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 284
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +3
Query: 660 HSLHR*EENPLRSESARSPALHCREKGPVPVKYEVRCP 773
H LH NP+ E A P ++ E PVP K V+ P
Sbjct: 42 HPLHE-PTNPVSREEALKPLINLNELRPVPAKKPVQKP 78
>SB_1477| Best HMM Match : RVT_1 (HMM E-Value=0.00065)
Length = 325
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = -3
Query: 645 GFVRLVNVDLDFIRYFLFN-GVRFRYVYWVFDVFLDGKGNFLFDGVGLRYGHFHL 484
G RL+ +DL ++ F++ VR+ + VFD+F G F FD L+ G+ HL
Sbjct: 166 GKCRLI-LDLSYLDKFIWKQSVRYEDIRTVFDLFQAGYYFFTFD---LKSGYHHL 216
>SB_40538| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +2
Query: 461 PSRRKYPMR*KCPYLSPTPSKRKFPLPSRNTSNTQYTYLNLTPLKRKYLMKSR 619
P R+YP+ + P P R++P+ R +Y P+ R+Y + R
Sbjct: 76 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARR 128
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +2
Query: 461 PSRRKYPMR*KCPYLSPTPSKRKFPLPSRNTSNTQYTYLNLTPLKRKYLMKSR 619
P R+YP+ + P P R++P+ R +Y P+ R+Y + R
Sbjct: 190 PIARRYPIARRYPIARGYPIARRYPIARRYPIARRYPIARRYPIARRYPIARR 242
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +2
Query: 461 PSRRKYPMR*KCPYLSPTPSKRKFPLPSRNTSNTQYTYLNLTPLKRKYLMKSR 619
P R+YP+ + P P R++P+ R +Y P+ R+Y + R
Sbjct: 208 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARR 260
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +2
Query: 461 PSRRKYPMR*KCPYLSPTPSKRKFPLPSRNTSNTQYTYLNLTPLKRKYLMKSR 619
P R+YP+ + P P R++P+ R +Y P+ R+Y + R
Sbjct: 214 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARR 266
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +2
Query: 461 PSRRKYPMR*KCPYLSPTPSKRKFPLPSRNTSNTQYTYLNLTPLKRKYLMKSR 619
P R+YP+ + P P R++P+ R +Y P+ R+Y + R
Sbjct: 220 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARR 272
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +2
Query: 461 PSRRKYPMR*KCPYLSPTPSKRKFPLPSRNTSNTQYTYLNLTPLKRKYLMKSR 619
P R+YP+ + P P R++P+ R +Y P+ R+Y + R
Sbjct: 226 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARR 278
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +2
Query: 461 PSRRKYPMR*KCPYLSPTPSKRKFPLPSRNTSNTQYTYLNLTPLKRKYLMKSR 619
P R+YP+ + P P R++P+ R +Y P+ R+Y + R
Sbjct: 232 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARR 284
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +2
Query: 461 PSRRKYPMR*KCPYLSPTPSKRKFPLPSRNTSNTQYTYLNLTPLKRKYLMKSR 619
P R+YP+ + P P R++P+ R +Y P+ R+Y + R
Sbjct: 238 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARR 290
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +2
Query: 461 PSRRKYPMR*KCPYLSPTPSKRKFPLPSRNTSNTQYTYLNLTPLKRKYLMKSR 619
P R+YP+ + P P R++P+ R +Y P+ R+Y + R
Sbjct: 244 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPVARR 296
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +2
Query: 461 PSRRKYPMR*KCPYLSPTPSKRKFPLPSRNTSNTQYTYLNLTPLKRKY 604
P R+YP+ + P P R++P+ R +Y P+ R+Y
Sbjct: 82 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRY 129
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +2
Query: 461 PSRRKYPMR*KCPYLSPTPSKRKFPLPSRNTSNTQYTYLNLTPLKRKYLMKSR 619
P R+YP+ + P P R++P+ R +Y P+ R+Y + R
Sbjct: 250 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPVARRYPIARR 302
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +2
Query: 461 PSRRKYPMR*KCPYLSPTPSKRKFPLPSRNTSNTQYTYLNLTPLKRKY 604
P R+YP+ + P P R++P+ R +Y P+ R+Y
Sbjct: 256 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPVARRYPIARRY 303
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +2
Query: 461 PSRRKYPMR*KCPYLSPTPSKRKFPLPSRNTSNTQYTYLNLTPLKRKYLMKSR 619
P R+YP+ + P P R++P+ R +Y P+ R+Y + R
Sbjct: 94 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARGYPIARRYPIARR 146
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +2
Query: 461 PSRRKYPMR*KCPYLSPTPSKRKFPLPSRNTSNTQYTYLNLTPLKRKYLMKSR 619
P R+YP+ + P P R++P+ R Y P+ R+Y + R
Sbjct: 100 PIARRYPIARRYPIARRYPIARRYPIARRYPIARGYPIARRYPIARRYPIARR 152
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +2
Query: 461 PSRRKYPMR*KCPYLSPTPSKRKFPLPSRNTSNTQYTYLNLTPLKRKYLMKSR 619
P R+YP+ + P P R++P+ R Y P+ R+Y + R
Sbjct: 172 PIARRYPIARRYPIARRYPIARRYPIARRYPIARGYPIARRYPIARRYPIARR 224
>SB_10368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 413
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/71 (25%), Positives = 29/71 (40%)
Frame = +2
Query: 455 PIPSRRKYPMR*KCPYLSPTPSKRKFPLPSRNTSNTQYTYLNLTPLKRKYLMKSRSTLTS 634
P+P+ R P P + P P+ R PLP+ + PL + + L +
Sbjct: 266 PLPAMRPLPAMRPLPAMPPLPAMR--PLPAMRPLPAMRPLPAMRPLPAMRPLPAMRPLPA 323
Query: 635 LTKPKSKCPLP 667
+ + CPLP
Sbjct: 324 MRPLPAMCPLP 334
>SB_3371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1135
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +2
Query: 461 PSRRKYPMR*KCPYLSPTPSKRKFPLPSRNTSNTQYTYLNLTPLKRKY 604
P R+YP+ + P P R++P+ R +Y P+ R+Y
Sbjct: 11 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRY 58
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +2
Query: 461 PSRRKYPMR*KCPYLSPTPSKRKFPLPSRNTSNTQYTYLNLTPLKRKYLMKSR 619
P R+YP+ + P P R++P+ R +Y P+ R+Y + R
Sbjct: 119 PIARRYPIARRYPIARGYPIARRYPIARRYPIARRYPIARRYPVARRYPIARR 171
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +2
Query: 461 PSRRKYPMR*KCPYLSPTPSKRKFPLPSRNTSNTQYTYLNLTPLKRKY 604
P R+YP+ + P P R++P+ R +Y P+ R+Y
Sbjct: 23 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARGYPIARRY 70
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/66 (22%), Positives = 30/66 (45%)
Frame = +2
Query: 461 PSRRKYPMR*KCPYLSPTPSKRKFPLPSRNTSNTQYTYLNLTPLKRKYLMKSRSTLTSLT 640
P R+YP+ + P P R++P+ R +Y P+ R+Y + +R + +
Sbjct: 137 PIARRYPIARRYPIARRYPIARRYPVARRYPIARRYPIARGYPIARRYPI-ARFSSAGIE 195
Query: 641 KPKSKC 658
+ +C
Sbjct: 196 ETSMRC 201
>SB_58777| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/45 (22%), Positives = 27/45 (60%)
Frame = +1
Query: 598 KVPYEVKVHVDKPYEAKVKVPTPYTVEKKIPYEVKVPVPQPYTVE 732
K+P ++ + + P + +K+PT ++ KIP ++ + +P +++
Sbjct: 27 KIPTDISIKI--PTDISIKIPTDISI--KIPTDISIKIPTDISIK 67
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/48 (25%), Positives = 28/48 (58%)
Frame = +1
Query: 598 KVPYEVKVHVDKPYEAKVKVPTPYTVEKKIPYEVKVPVPQPYTVEKKV 741
K+P ++ + + P + +K+PT ++ KIP ++ + +P + KK+
Sbjct: 35 KIPTDISIKI--PTDISIKIPTDISI--KIPTDISIKIPT--DISKKI 76
>SB_31463| Best HMM Match : ABC2_membrane (HMM E-Value=3.1)
Length = 268
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -2
Query: 145 PFCLVSSLRLPSVCLSPPWQRQPRPTMPPKITVYFIVVS 29
P L SSL PS+ SP P P PP T+ I+V+
Sbjct: 217 PLSLSSSLSSPSLS-SPSSASPPLPPPPPSSTIIIIIVA 254
>SB_59467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 864
Score = 28.7 bits (61), Expect = 6.4
Identities = 20/81 (24%), Positives = 35/81 (43%)
Frame = +2
Query: 407 RW*RRCLFRIQSRNTSPIPSRRKYPMR*KCPYLSPTPSKRKFPLPSRNTSNTQYTYLNLT 586
R+ +R R SP+ R P SPT SK PL R++ +QY+ +++
Sbjct: 603 RYSQRSPIRETEAQRSPVSQRSPVSQNSPVPQRSPT-SKHS-PLSQRHSYGSQYSNQDVS 660
Query: 587 PLKRKYLMKSRSTLTSLTKPK 649
P ++ + T+P+
Sbjct: 661 PSDSRHSADASRDKEEFTRPR 681
>SB_44033| Best HMM Match : SRCR (HMM E-Value=1.3)
Length = 112
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +1
Query: 631 KPYEAKVKVPTPYTVEKKIPYEVKVPVPQPYTVEK 735
+P+ + P PYT + PY + P+ PYT +
Sbjct: 11 RPFPYTTRRPFPYTTRRPFPYTTRRPL--PYTTRR 43
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 6/43 (13%)
Frame = +1
Query: 631 KPYEAKVKVPTPYTVEKKIPYEVKVPVPQ------PYTVEKKV 741
+P+ + P PYT + +PY + P P PYT +V
Sbjct: 19 RPFPYTTRRPFPYTTRRPLPYTTRRPFPYTTRPPFPYTTRPQV 61
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +1
Query: 604 PYEVKVHVDKPYEAKVKVPTPYTVEKKI--PYEVKVPVPQPYTVE 732
P+ +K H KP+ K P+T + + P K +P+T++
Sbjct: 51 PHTIKPHTTKPHTTKPHTTKPHTTKPRTTKPQTTKPHTTKPHTIK 95
>SB_8814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 28.3 bits (60), Expect = 8.4
Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 3/113 (2%)
Frame = +3
Query: 447 TRPLYRREESTL*GESARTSALHRRKESSLYRQGIRQIPSIRT*TLHR*KESTL*SQGPR 626
T+P+ RE L GE ++TSA H S +++ I+ T H+ Q P
Sbjct: 135 TQPMTTRESQALNGEQSKTSASHILTTKSPQLTATKKVNKIQ--TTHQ--------QNPE 184
Query: 627 *QALRSQSQSAHSLHR*E--EN-PLRSESARSPALHCREKGPVPVKYEVRCPT 776
+ + S+ H HR E +N PL + + +P+ ++C T
Sbjct: 185 NRYKPTVSKQGHHTHREERIDNVPLTVQPKLNTDFVLAMNPRIPIDLNIKCRT 237
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,374,326
Number of Sequences: 59808
Number of extensions: 412097
Number of successful extensions: 1510
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1436
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2431332827
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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