Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_F10
(852 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 287 5e-78
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 287 5e-78
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 286 1e-77
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 286 1e-77
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 268 3e-72
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 268 3e-72
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 258 3e-69
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 139 2e-33
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 137 8e-33
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 136 2e-32
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 136 2e-32
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 134 5e-32
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 134 9e-32
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 134 9e-32
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 133 2e-31
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 128 5e-30
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 103 2e-22
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 103 2e-22
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 31 0.74
At4g14510.1 68417.m02236 expressed protein contains Pfam domain,... 30 1.7
At3g57510.1 68416.m06402 endo-polygalacturonase (ADPG1) identica... 30 2.2
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 29 3.9
At3g29160.3 68416.m03654 Snf1-related protein kinase (KIN11) ide... 29 5.2
At3g29160.2 68416.m03653 Snf1-related protein kinase (KIN11) ide... 29 5.2
At3g29160.1 68416.m03652 Snf1-related protein kinase (KIN11) ide... 29 5.2
At1g52160.1 68414.m05887 metallo-beta-lactamase family protein 29 5.2
At1g61140.1 68414.m06888 SNF2 domain-containing protein / helica... 28 9.1
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 287 bits (705), Expect = 5e-78
Identities = 124/139 (89%), Positives = 136/139 (97%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGN 280
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 461 RIRKLADQCTGLQGFLIFH 517
RIRKLAD CTGLQGFL+F+
Sbjct: 121 RIRKLADNCTGLQGFLVFN 139
Score = 132 bits (319), Expect = 3e-31
Identities = 57/83 (68%), Positives = 71/83 (85%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEXIYDICRRNLDI 758
DYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNE IYDICRR+L I
Sbjct: 160 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSI 219
Query: 759 ERPTYXXLNRLIGQIVSSXTXSL 827
ERPTY LNRL+ Q++SS T SL
Sbjct: 220 ERPTYTNLNRLVSQVISSLTASL 242
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 287 bits (705), Expect = 5e-78
Identities = 124/139 (89%), Positives = 136/139 (97%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGN 280
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 461 RIRKLADQCTGLQGFLIFH 517
RIRKLAD CTGLQGFL+F+
Sbjct: 121 RIRKLADNCTGLQGFLVFN 139
Score = 132 bits (319), Expect = 3e-31
Identities = 57/83 (68%), Positives = 71/83 (85%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEXIYDICRRNLDI 758
DYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNE IYDICRR+L I
Sbjct: 160 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSI 219
Query: 759 ERPTYXXLNRLIGQIVSSXTXSL 827
ERPTY LNRL+ Q++SS T SL
Sbjct: 220 ERPTYTNLNRLVSQVISSLTASL 242
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 286 bits (702), Expect = 1e-77
Identities = 124/139 (89%), Positives = 135/139 (97%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGN 280
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 461 RIRKLADQCTGLQGFLIFH 517
RIRKLAD CTGLQGFL+F+
Sbjct: 121 RIRKLADNCTGLQGFLVFN 139
Score = 132 bits (320), Expect = 2e-31
Identities = 57/83 (68%), Positives = 72/83 (86%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEXIYDICRRNLDI 758
DYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNE IYDICRR+L+I
Sbjct: 160 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNI 219
Query: 759 ERPTYXXLNRLIGQIVSSXTXSL 827
ERPTY LNRL+ Q++SS T SL
Sbjct: 220 ERPTYTNLNRLVSQVISSLTASL 242
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 286 bits (702), Expect = 1e-77
Identities = 124/139 (89%), Positives = 135/139 (97%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGN 280
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 461 RIRKLADQCTGLQGFLIFH 517
RIRKLAD CTGLQGFL+F+
Sbjct: 121 RIRKLADNCTGLQGFLVFN 139
Score = 132 bits (320), Expect = 2e-31
Identities = 57/83 (68%), Positives = 72/83 (86%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEXIYDICRRNLDI 758
DYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNE IYDICRR+L+I
Sbjct: 160 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNI 219
Query: 759 ERPTYXXLNRLIGQIVSSXTXSL 827
ERPTY LNRL+ Q++SS T SL
Sbjct: 220 ERPTYTNLNRLVSQVISSLTASL 242
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 268 bits (657), Expect = 3e-72
Identities = 115/139 (82%), Positives = 130/139 (93%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGN 280
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAG
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 461 RIRKLADQCTGLQGFLIFH 517
R+RKLAD CTGLQGFL+F+
Sbjct: 121 RVRKLADNCTGLQGFLVFN 139
Score = 138 bits (333), Expect = 6e-33
Identities = 63/83 (75%), Positives = 72/83 (86%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEXIYDICRRNLDI 758
DYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNE IYDICRR+LDI
Sbjct: 160 DYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDI 219
Query: 759 ERPTYXXLNRLIGQIVSSXTXSL 827
ERPTY LNRLI QI+SS T SL
Sbjct: 220 ERPTYTNLNRLISQIISSLTTSL 242
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 268 bits (657), Expect = 3e-72
Identities = 115/139 (82%), Positives = 130/139 (93%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGN 280
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAG
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 461 RIRKLADQCTGLQGFLIFH 517
R+RKLAD CTGLQGFL+F+
Sbjct: 121 RVRKLADNCTGLQGFLVFN 139
Score = 138 bits (333), Expect = 6e-33
Identities = 63/83 (75%), Positives = 72/83 (86%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEXIYDICRRNLDI 758
DYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNE IYDICRR+LDI
Sbjct: 160 DYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDI 219
Query: 759 ERPTYXXLNRLIGQIVSSXTXSL 827
ERPTY LNRLI QI+SS T SL
Sbjct: 220 ERPTYTNLNRLISQIISSLTTSL 242
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 258 bits (632), Expect = 3e-69
Identities = 109/139 (78%), Positives = 128/139 (92%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGN 280
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +G
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
HVPRAVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+G+EIVD L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 461 RIRKLADQCTGLQGFLIFH 517
R+RKLAD CTGLQGFL+F+
Sbjct: 121 RLRKLADNCTGLQGFLVFN 139
Score = 132 bits (320), Expect = 2e-31
Identities = 60/83 (72%), Positives = 70/83 (84%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEXIYDICRRNLDI 758
D+GKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D ++DNE IYDICRR+LDI
Sbjct: 160 DFGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDI 219
Query: 759 ERPTYXXLNRLIGQIVSSXTXSL 827
ERPTY LNRLI Q +SS T SL
Sbjct: 220 ERPTYSNLNRLISQTISSLTTSL 242
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 139 bits (336), Expect = 2e-33
Identities = 64/142 (45%), Positives = 89/142 (62%), Gaps = 3/142 (2%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 271
MRE + + GQ G QIG+ WE+ C EHGI P G+ +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRY-----VGNSDLQLERVNVYYNEAS 55
Query: 272 AGNHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDL 451
G +VPRA+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D
Sbjct: 56 CGRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDA 115
Query: 452 VLDRIRKLADQCTGLQGFLIFH 517
VLD +RK A+ C LQGF + H
Sbjct: 116 VLDVVRKEAENCDCLQGFQVCH 137
Score = 79.0 bits (186), Expect = 4e-15
Identities = 34/83 (40%), Positives = 53/83 (63%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEXIYDICRRNLDI 758
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNE +YDIC R L +
Sbjct: 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 217
Query: 759 ERPTYXXLNRLIGQIVSSXTXSL 827
P++ LN LI +S T L
Sbjct: 218 TTPSFGDLNHLISATMSGVTCCL 240
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 137 bits (332), Expect = 8e-33
Identities = 62/139 (44%), Positives = 87/139 (62%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGN 280
MRE + V GQ G QIG+ WE+ C EHG+ P G+ D + N +++E G
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSA-DLQLERINVYYNEASGGR 59
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPRAV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 119
Query: 461 RIRKLADQCTGLQGFLIFH 517
+RK A+ C LQGF + H
Sbjct: 120 VVRKEAENCDCLQGFQVCH 138
Score = 81.4 bits (192), Expect = 7e-16
Identities = 35/83 (42%), Positives = 54/83 (65%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEXIYDICRRNLDI 758
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNE +YDIC R L +
Sbjct: 159 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 218
Query: 759 ERPTYXXLNRLIGQIVSSXTXSL 827
P++ LN LI +S T SL
Sbjct: 219 STPSFGDLNHLISATMSGVTCSL 241
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 136 bits (328), Expect = 2e-32
Identities = 62/139 (44%), Positives = 85/139 (61%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGN 280
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGR 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 461 RIRKLADQCTGLQGFLIFH 517
+RK A+ C LQGF + H
Sbjct: 119 VVRKEAENCDCLQGFQVCH 137
Score = 79.0 bits (186), Expect = 4e-15
Identities = 34/83 (40%), Positives = 53/83 (63%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEXIYDICRRNLDI 758
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNE +YDIC R L +
Sbjct: 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 217
Query: 759 ERPTYXXLNRLIGQIVSSXTXSL 827
P++ LN LI +S T L
Sbjct: 218 TTPSFGDLNHLISATMSGVTCCL 240
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 136 bits (328), Expect = 2e-32
Identities = 62/139 (44%), Positives = 85/139 (61%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGN 280
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGR 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 461 RIRKLADQCTGLQGFLIFH 517
+RK A+ C LQGF + H
Sbjct: 119 VVRKEAENCDCLQGFQVCH 137
Score = 79.0 bits (186), Expect = 4e-15
Identities = 34/83 (40%), Positives = 53/83 (63%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEXIYDICRRNLDI 758
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNE +YDIC R L +
Sbjct: 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 217
Query: 759 ERPTYXXLNRLIGQIVSSXTXSL 827
P++ LN LI +S T L
Sbjct: 218 TTPSFGDLNHLISATMSGVTCCL 240
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 134 bits (325), Expect = 5e-32
Identities = 61/139 (43%), Positives = 87/139 (62%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGN 280
MRE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 YVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 119
Query: 461 RIRKLADQCTGLQGFLIFH 517
+RK A+ C LQGF + H
Sbjct: 120 VVRKEAENCDCLQGFQVCH 138
Score = 81.4 bits (192), Expect = 7e-16
Identities = 35/83 (42%), Positives = 54/83 (65%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEXIYDICRRNLDI 758
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNE +YDIC R L +
Sbjct: 159 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 218
Query: 759 ERPTYXXLNRLIGQIVSSXTXSL 827
P++ LN LI +S T SL
Sbjct: 219 STPSFGDLNHLISATMSGVTCSL 241
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 134 bits (323), Expect = 9e-32
Identities = 62/139 (44%), Positives = 86/139 (61%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGN 280
MRE + + GQ G QIG WE+ C EHGI GQ D + + N +F+E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQL--ERINVYFNEASGGK 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 461 RIRKLADQCTGLQGFLIFH 517
+RK A+ C LQGF + H
Sbjct: 119 VVRKEAENCDCLQGFQVCH 137
Score = 80.2 bits (189), Expect = 2e-15
Identities = 34/83 (40%), Positives = 53/83 (63%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEXIYDICRRNLDI 758
+Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++DNE +YDIC R L +
Sbjct: 158 EYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 217
Query: 759 ERPTYXXLNRLIGQIVSSXTXSL 827
PT+ LN LI +S T L
Sbjct: 218 ANPTFGDLNHLISATMSGVTCCL 240
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 134 bits (323), Expect = 9e-32
Identities = 62/139 (44%), Positives = 87/139 (62%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGN 280
MRE + + GQ G QIG+ WE+ LEHGI G+ D + + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQL--ERVNVYYNEASCGR 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 461 RIRKLADQCTGLQGFLIFH 517
+RK A+ C LQGF + H
Sbjct: 119 VVRKEAENCDCLQGFQVCH 137
Score = 78.6 bits (185), Expect = 5e-15
Identities = 33/83 (39%), Positives = 53/83 (63%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEXIYDICRRNLDI 758
+Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++DNE +YDIC R L +
Sbjct: 158 EYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 217
Query: 759 ERPTYXXLNRLIGQIVSSXTXSL 827
P++ LN LI +S T L
Sbjct: 218 STPSFGDLNHLISATMSGVTCCL 240
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 133 bits (321), Expect = 2e-31
Identities = 61/139 (43%), Positives = 85/139 (61%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGN 280
MRE + + GQ G QIG WE+ C EHGI G+ + + + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQL--ERVNVYYNEASCGR 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 461 RIRKLADQCTGLQGFLIFH 517
+RK A+ C LQGF + H
Sbjct: 119 VVRKEAENCDCLQGFQVCH 137
Score = 79.0 bits (186), Expect = 4e-15
Identities = 34/83 (40%), Positives = 53/83 (63%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEXIYDICRRNLDI 758
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNE +YDIC R L +
Sbjct: 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 217
Query: 759 ERPTYXXLNRLIGQIVSSXTXSL 827
P++ LN LI +S T L
Sbjct: 218 TTPSFGDLNHLISATMSGVTCCL 240
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 128 bits (309), Expect = 5e-30
Identities = 60/139 (43%), Positives = 85/139 (61%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGN 280
MRE + + GQ G QIG WE+ C EHGI GQ D + + + +F+E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQL--ERIDVYFNEASGGK 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 461 RIRKLADQCTGLQGFLIFH 517
+RK A+ LQGF + H
Sbjct: 119 VVRKEAENSDCLQGFQVCH 137
Score = 80.2 bits (189), Expect = 2e-15
Identities = 34/83 (40%), Positives = 53/83 (63%)
Frame = +3
Query: 579 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEXIYDICRRNLDI 758
+Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++DNE +YDIC R L +
Sbjct: 158 EYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 217
Query: 759 ERPTYXXLNRLIGQIVSSXTXSL 827
PT+ LN LI +S T L
Sbjct: 218 ANPTFGDLNHLISATMSGVTCCL 240
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 103 bits (247), Expect = 2e-22
Identities = 53/140 (37%), Positives = 82/140 (58%), Gaps = 2/140 (1%)
Frame = +2
Query: 104 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGNH 283
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + ++
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 284 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVL 457
+PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ-GKGVEEEIM 119
Query: 458 DRIRKLADQCTGLQGFLIFH 517
D I + AD L+GF++ H
Sbjct: 120 DMIDREADGSDSLEGFVLCH 139
Score = 54.4 bits (125), Expect = 9e-08
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +3
Query: 582 YGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEXIYDICRRNLDI 758
Y KK ++++P + S VV+PYNS+LT ++DC ++DN + I L +
Sbjct: 161 YSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALGRIAVERLHL 220
Query: 759 ERPTYXXLNRLIGQIVSSXTXSL 827
PT+ N L+ ++S+ T +L
Sbjct: 221 TNPTFAQTNSLVSTVMSASTTTL 243
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 103 bits (246), Expect = 2e-22
Identities = 53/140 (37%), Positives = 82/140 (58%), Gaps = 2/140 (1%)
Frame = +2
Query: 104 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGNH 283
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + ++
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 284 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVL 457
+PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ-GKGVEEEIM 119
Query: 458 DRIRKLADQCTGLQGFLIFH 517
D I + AD L+GF++ H
Sbjct: 120 DMIDREADGSDSLEGFVLCH 139
Score = 54.8 bits (126), Expect = 7e-08
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +3
Query: 582 YGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEXIYDICRRNLDI 758
Y KK ++++P + S VV+PYNS+LT ++DC ++DN + I L +
Sbjct: 161 YSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHL 220
Query: 759 ERPTYXXLNRLIGQIVSSXTXSL 827
PT+ N L+ ++S+ T +L
Sbjct: 221 TNPTFAQTNSLVSTVMSASTTTL 243
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 31.5 bits (68), Expect = 0.74
Identities = 28/108 (25%), Positives = 41/108 (37%), Gaps = 3/108 (2%)
Frame = -3
Query: 538 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYDFLSNXXXXXXXXXGRIFLTSNKLFWMK 359
+G TEGVED S LV D ++ QI D + IF L +++
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRDSSDS-----SYGNEEIFEAFQSLLYVR 663
Query: 358 QLSVCASADLINNSR---FKIDEDSTGYVIASSGLAEESVERIVSTPD 224
L +++ F++ S IAS LA E+I D
Sbjct: 664 DLEFSLCKEMLGEGELISFQVSNLSDELKIASQELAFVKEEKIALEKD 711
>At4g14510.1 68417.m02236 expressed protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 932
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 179 EHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGNHVPRAVFVDLEPTVVD 328
E GIQ +G + ++ + G D +T F + A + P FV+L+ +D
Sbjct: 881 EGGIQANGSL-SETDVEFGSDESDTDFGDNSASSTTPETTFVELQNEELD 929
>At3g57510.1 68416.m06402 endo-polygalacturonase (ADPG1) identical
to endo-polygalacturonase [Arabidopsis thaliana]
GI:2597824
Length = 431
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -2
Query: 758 NVEITA---ADVIDGFIVDHESTVRVLKGCVGGEDRVVGLDDGSGNLR 624
NVEITA + DG + + +RV +G D + ++DG+ NL+
Sbjct: 230 NVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQ 277
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -1
Query: 270 PVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 145
PVS L +SPP +W SGW P +PI
Sbjct: 101 PVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At3g29160.3 68416.m03654 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 359
Score = 28.7 bits (61), Expect = 5.2
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Frame = +2
Query: 167 LYCLEHGIQP--DGQMPT-DKTIGGGDDSFNTFFSETGAGNHVPRAVFVD-LEPTVVDEV 334
LY L G P D +P K I GG + + S A + +PR + VD ++ + E+
Sbjct: 208 LYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRITIPEI 266
Query: 335 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 463
R + Q P L D + + I +E+V++ DR
Sbjct: 267 RQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
>At3g29160.2 68416.m03653 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 512
Score = 28.7 bits (61), Expect = 5.2
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Frame = +2
Query: 167 LYCLEHGIQP--DGQMPT-DKTIGGGDDSFNTFFSETGAGNHVPRAVFVD-LEPTVVDEV 334
LY L G P D +P K I GG + + S A + +PR + VD ++ + E+
Sbjct: 208 LYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRITIPEI 266
Query: 335 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 463
R + Q P L D + + I +E+V++ DR
Sbjct: 267 RQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
>At3g29160.1 68416.m03652 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 512
Score = 28.7 bits (61), Expect = 5.2
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Frame = +2
Query: 167 LYCLEHGIQP--DGQMPT-DKTIGGGDDSFNTFFSETGAGNHVPRAVFVD-LEPTVVDEV 334
LY L G P D +P K I GG + + S A + +PR + VD ++ + E+
Sbjct: 208 LYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRITIPEI 266
Query: 335 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 463
R + Q P L D + + I +E+V++ DR
Sbjct: 267 RQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
>At1g52160.1 68414.m05887 metallo-beta-lactamase family protein
Length = 890
Score = 28.7 bits (61), Expect = 5.2
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = -3
Query: 307 IDEDSTGYVIASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITD---LDS 137
+ E G+ + SG + E + ++ D + H A DA+++ T +D
Sbjct: 748 VGEQILGWKMVYSGDSRPCPETVEASRDATILIHEATFEDALIEEALAKNHSTTKEAIDV 807
Query: 136 G-LANVYRDALTHF 98
G ANVYR LTHF
Sbjct: 808 GSAANVYRIVLTHF 821
>At1g61140.1 68414.m06888 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
similar to ATPase [Homo sapiens] GI:531196; contains
Pfam profiles PF00271: Helicase conserved C-terminal
domain, PF00176: SNF2 family N-terminal domain, PF00097:
Zinc finger, C3HC4 type (RING finger)
Length = 1287
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 573 PXDYGKKSKLEFAIYPAPQVSTAVVEPYNS 662
P D+ + F P VS A V+PYNS
Sbjct: 284 PIDFSSARGISFKFESNPSVSPACVKPYNS 313
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,581,405
Number of Sequences: 28952
Number of extensions: 376504
Number of successful extensions: 1244
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1233
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1980143200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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