Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_F07
         (834 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   3.9  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    22   6.9  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   6.9  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -2

Query: 548 ARRKIKCRGENSKREGSYPERHVESLAEAETW 453
           A + ++  G+ SKR+G+Y  R  +   E   W
Sbjct: 347 AGKHLRKVGDPSKRKGTYAFRTPDENGEGGAW 378


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 8/37 (21%), Positives = 17/37 (45%)
 Frame = +2

Query: 287 NQTQSASLSCLQGCHQQRESDPALWKRKHKAGRPKKQ 397
           N   + ++  L    Q +  DP+ W+++ K     K+
Sbjct: 115 NNGTNKNMRRLSTTTQNKNDDPSYWEKRRKNNEAAKR 151


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 487 DMWNPSPKPKPGKP 446
           ++ NPS   KPGKP
Sbjct: 680 NLQNPSTGSKPGKP 693


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,073
Number of Sequences: 336
Number of extensions: 4215
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22932949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)