Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_F07
(834 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g19310.1 68414.m02401 zinc finger (C3HC4-type RING finger) fa... 113 2e-25
At2g23780.1 68415.m02840 zinc finger (C3HC4-type RING finger) fa... 110 1e-24
At4g03510.2 68417.m00479 zinc finger (C3HC4-type RING finger) fa... 103 1e-22
At4g03510.1 68417.m00478 zinc finger (C3HC4-type RING finger) fa... 103 1e-22
At1g74990.1 68414.m08705 zinc finger (C3HC4-type RING finger) fa... 101 8e-22
At3g58030.3 68416.m06469 zinc finger (C3HC4-type RING finger) fa... 100 1e-21
At3g58030.2 68416.m06468 zinc finger (C3HC4-type RING finger) fa... 100 1e-21
At3g58030.1 68416.m06467 zinc finger (C3HC4-type RING finger) fa... 100 1e-21
At2g42030.1 68415.m05198 zinc finger (C3HC4-type RING finger) fa... 98 7e-21
At4g28270.1 68417.m04049 zinc finger (C3HC4-type RING finger) fa... 89 4e-18
At4g27470.1 68417.m03947 zinc finger (C3HC4-type RING finger) fa... 87 1e-17
At2g44410.1 68415.m05523 expressed protein 78 6e-15
At2g26350.1 68415.m03163 zinc-binding peroxisomal integral membr... 54 9e-08
At2g44950.1 68415.m05596 zinc finger (C3HC4-type RING finger) fa... 52 5e-07
At1g55255.1 68414.m06311 zinc finger (C3HC4-type RING finger) fa... 48 8e-06
At5g43530.1 68418.m05322 SNF2 domain-containing protein / helica... 48 1e-05
At4g01270.1 68417.m00168 zinc finger (C3HC4-type RING finger) fa... 47 1e-05
At5g22750.1 68418.m02657 SNF2 domain-containing protein / helica... 47 2e-05
At5g05130.1 68418.m00544 SNF2 domain-containing protein / helica... 45 5e-05
At5g01520.1 68418.m00067 zinc finger (C3HC4-type RING finger) fa... 44 9e-05
At3g26730.1 68416.m03342 zinc finger (C3HC4-type RING finger) fa... 44 9e-05
At1g11100.1 68414.m01271 SNF2 domain-containing protein / helica... 44 9e-05
At5g03450.1 68418.m00300 zinc finger (C3HC4-type RING finger) fa... 44 2e-04
At3g23280.2 68416.m02935 zinc finger (C3HC4-type RING finger) fa... 43 2e-04
At3g23280.1 68416.m02934 zinc finger (C3HC4-type RING finger) fa... 43 2e-04
At3g16090.1 68416.m02033 zinc finger (C3HC4-type RING finger) fa... 43 2e-04
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 43 2e-04
At1g50410.1 68414.m05650 SNF2 domain-containing protein / helica... 43 2e-04
At4g10940.1 68417.m01779 PHD finger family protein contains Pfam... 43 3e-04
At1g61140.1 68414.m06888 SNF2 domain-containing protein / helica... 43 3e-04
At5g01960.1 68418.m00115 zinc finger (C3HC4-type RING finger) fa... 42 4e-04
At1g13195.1 68414.m01530 zinc finger (C3HC4-type RING finger) fa... 42 4e-04
At5g43420.1 68418.m05309 zinc finger (C3HC4-type RING finger) fa... 42 5e-04
At1g02860.1 68414.m00251 SPX (SYG1/Pho81/XPR1) domain-containing... 42 5e-04
At4g21070.1 68417.m03047 BRCT domain-containing protein / zinc f... 42 7e-04
At4g08590.1 68417.m01412 zinc finger (C3HC4-type RING finger) fa... 42 7e-04
At3g62690.1 68416.m07042 zinc finger (C3HC4-type RING finger) fa... 42 7e-04
At3g16600.1 68416.m02122 SNF2 domain-containing protein / helica... 42 7e-04
At2g20030.1 68415.m02341 zinc finger (C3HC4-type RING finger) fa... 41 9e-04
At1g05120.1 68414.m00514 SNF2 domain-containing protein / helica... 41 9e-04
At5g58787.1 68418.m07365 zinc finger (C3HC4-type RING finger) fa... 41 0.001
At3g20010.1 68416.m02531 SNF2 domain-containing protein / helica... 41 0.001
At1g65040.2 68414.m07372 zinc finger (C3HC4-type RING finger) fa... 41 0.001
At1g65040.1 68414.m07373 zinc finger (C3HC4-type RING finger) fa... 41 0.001
At1g24440.1 68414.m03079 expressed protein similar to MTD2 [Medi... 41 0.001
At5g39550.1 68418.m04791 zinc finger (C3HC4-type RING finger) fa... 40 0.002
At1g66050.1 68414.m07497 zinc finger (C3HC4-type RING finger) fa... 40 0.002
At1g66040.1 68414.m07495 zinc finger (C3HC4-type RING finger) fa... 40 0.002
At2g38920.1 68415.m04784 SPX (SYG1/Pho81/XPR1) domain-containing... 40 0.002
At1g06770.1 68414.m00720 zinc finger (C3HC4-type RING finger) fa... 40 0.002
At5g47610.1 68418.m05876 zinc finger (C3HC4-type RING finger) fa... 40 0.003
At4g14365.1 68417.m02213 zinc finger (C3HC4-type RING finger) fa... 40 0.003
At4g28890.1 68417.m04129 zinc finger (C3HC4-type RING finger) fa... 39 0.004
At3g07200.1 68416.m00859 zinc finger (C3HC4-type RING finger) fa... 39 0.004
At1g18660.4 68414.m02326 zinc finger (C3HC4-type RING finger) fa... 39 0.004
At1g18660.3 68414.m02329 zinc finger (C3HC4-type RING finger) fa... 39 0.004
At1g18660.2 68414.m02328 zinc finger (C3HC4-type RING finger) fa... 39 0.004
At1g18660.1 68414.m02327 zinc finger (C3HC4-type RING finger) fa... 39 0.004
At5g54990.1 68418.m06848 zinc finger (C3HC4-type RING finger) fa... 39 0.005
At3g13430.1 68416.m01688 zinc finger (C3HC4-type RING finger) fa... 39 0.005
At1g55530.1 68414.m06353 zinc finger (C3HC4-type RING finger) fa... 39 0.005
At5g46650.1 68418.m05748 zinc finger (C3HC4-type RING finger) fa... 38 0.006
At1g04020.2 68414.m00389 zinc finger (C3HC4-type RING finger) fa... 38 0.006
At1g04020.1 68414.m00388 zinc finger (C3HC4-type RING finger) fa... 38 0.006
At3g05250.1 68416.m00573 zinc finger (C3HC4-type RING finger) fa... 38 0.008
At3g05200.1 68416.m00567 zinc finger (C3HC4-type RING finger) fa... 38 0.008
At2g44580.1 68415.m05548 zinc finger (C3HC4-type RING finger) fa... 38 0.008
At1g73760.1 68414.m08540 zinc finger (C3HC4-type RING finger) fa... 38 0.008
At1g47570.1 68414.m05281 zinc finger (C3HC4-type RING finger) fa... 38 0.008
At5g53910.1 68418.m06708 (S)-2-hydroxy-acid oxidase, peroxisomal... 38 0.011
At5g48655.3 68418.m06019 zinc finger (C3HC4-type RING finger) fa... 38 0.011
At5g48655.2 68418.m06018 zinc finger (C3HC4-type RING finger) fa... 38 0.011
At5g48655.1 68418.m06017 zinc finger (C3HC4-type RING finger) fa... 38 0.011
At5g01450.1 68418.m00058 expressed protein 38 0.011
At3g24800.1 68416.m03112 PRT1 protein (PRT1) E3, N-end rule ubiq... 38 0.011
At2g17450.1 68415.m02014 zinc finger (C3HC4-type RING finger) fa... 38 0.011
At5g44690.1 68418.m05476 hypothetical protein 37 0.014
At4g09130.1 68417.m01507 zinc finger (C3HC4-type RING finger) fa... 37 0.014
At3g48030.1 68416.m05236 hypoxia-responsive family protein / zin... 37 0.014
At3g47160.1 68416.m05120 expressed protein similar to MTD2 [Medi... 37 0.014
At3g10910.1 68416.m01313 zinc finger (C3HC4-type RING finger) fa... 37 0.014
At1g67180.1 68414.m07642 zinc finger (C3HC4-type RING finger) fa... 37 0.014
At1g35330.1 68414.m04379 zinc finger (C3HC4-type RING finger) fa... 37 0.014
At5g02750.1 68418.m00217 zinc finger (C3HC4-type RING finger) fa... 37 0.019
At3g14320.1 68416.m01811 zinc finger (C3HC4-type RING finger) fa... 37 0.019
At3g03550.1 68416.m00357 zinc finger (C3HC4-type RING finger) fa... 37 0.019
At2g47560.1 68415.m05935 zinc finger (C3HC4-type RING finger) fa... 37 0.019
At1g17970.1 68414.m02223 zinc finger (C3HC4-type RING finger) fa... 37 0.019
At4g26400.2 68417.m03800 zinc finger (C3HC4-type RING finger) fa... 36 0.025
At4g26400.1 68417.m03799 zinc finger (C3HC4-type RING finger) fa... 36 0.025
At2g38185.4 68415.m04692 zinc finger (C3HC4-type RING finger) fa... 36 0.025
At2g37580.1 68415.m04610 zinc finger (C3HC4-type RING finger) fa... 36 0.025
At2g30580.1 68415.m03726 zinc finger (C3HC4-type RING finger) fa... 36 0.025
At4g24015.1 68417.m03451 zinc finger (RING-H2 type) protein-rela... 36 0.033
At4g13100.2 68417.m02042 zinc finger (C3HC4-type RING finger) fa... 36 0.033
At4g13100.1 68417.m02041 zinc finger (C3HC4-type RING finger) fa... 36 0.033
At3g53410.1 68416.m05894 zinc finger (C3HC4-type RING finger) fa... 36 0.033
At3g19950.1 68416.m02525 zinc finger (C3HC4-type RING finger) fa... 36 0.033
At3g09770.1 68416.m01157 zinc finger (C3HC4-type RING finger) fa... 36 0.033
At1g72200.1 68414.m08348 zinc finger (C3HC4-type RING finger) fa... 36 0.033
At5g17600.1 68418.m02064 zinc finger (C3HC4-type RING finger) fa... 36 0.044
At4g01020.1 68417.m00137 helicase domain-containing protein / IB... 36 0.044
At3g28620.1 68416.m03572 zinc finger (C3HC4-type RING finger) fa... 36 0.044
At3g27330.1 68416.m03418 zinc finger (C3HC4-type RING finger) fa... 36 0.044
At3g19910.1 68416.m02521 zinc finger (C3HC4-type RING finger) fa... 36 0.044
At3g11110.1 68416.m01345 zinc finger (C3HC4-type RING finger) fa... 36 0.044
At1g22500.1 68414.m02811 zinc finger (C3HC4-type RING finger) fa... 36 0.044
At5g58580.1 68418.m07341 zinc finger (C3HC4-type RING finger) fa... 35 0.058
At3g13228.1 68416.m01663 zinc finger (C3HC4-type RING finger) fa... 35 0.058
At2g29840.1 68415.m03624 zinc finger (C3HC4-type RING finger) fa... 35 0.058
At1g76410.1 68414.m08881 zinc finger (C3HC4-type RING finger) fa... 35 0.058
At5g56340.1 68418.m07032 zinc finger (C3HC4-type RING finger) fa... 35 0.077
At5g27420.1 68418.m03273 zinc finger (C3HC4-type RING finger) fa... 35 0.077
At4g37890.2 68417.m05359 zinc finger (C3HC4-type RING finger) fa... 35 0.077
At4g37890.1 68417.m05358 zinc finger (C3HC4-type RING finger) fa... 35 0.077
At3g06140.1 68416.m00705 zinc finger (C3HC4-type RING finger) fa... 35 0.077
At3g05670.1 68416.m00631 PHD finger family protein contains Pfam... 35 0.077
At2g37150.2 68415.m04558 zinc finger (C3HC4-type RING finger) fa... 35 0.077
At2g37150.1 68415.m04557 zinc finger (C3HC4-type RING finger) fa... 35 0.077
At2g34000.1 68415.m04163 zinc finger protein-related contains we... 35 0.077
At2g04240.2 68415.m00413 zinc finger (C3HC4-type RING finger) fa... 35 0.077
At2g04240.1 68415.m00412 zinc finger (C3HC4-type RING finger) fa... 35 0.077
At1g04360.1 68414.m00426 zinc finger (C3HC4-type RING finger) fa... 35 0.077
At5g66070.1 68418.m08324 zinc finger (C3HC4-type RING finger) fa... 34 0.10
At5g43200.1 68418.m05278 zinc finger (C3HC4-type RING finger) fa... 34 0.10
At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99... 34 0.10
At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99... 34 0.10
At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99... 34 0.10
At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99... 34 0.10
At5g10650.1 68418.m01233 zinc finger (C3HC4-type RING finger) fa... 34 0.10
At5g10370.1 68418.m01203 helicase domain-containing protein / IB... 34 0.10
At4g22250.1 68417.m03219 zinc finger (C3HC4-type RING finger) fa... 34 0.10
At4g09100.1 68417.m01501 zinc finger (C3HC4-type RING finger) fa... 34 0.10
At3g25030.1 68416.m03128 zinc finger (C3HC4-type RING finger) fa... 34 0.10
At3g18930.2 68416.m02403 zinc finger (C3HC4-type RING finger) fa... 34 0.10
At3g18930.1 68416.m02402 zinc finger (C3HC4-type RING finger) fa... 34 0.10
At2g38185.3 68415.m04691 zinc finger (C3HC4-type RING finger) fa... 34 0.10
At2g38185.2 68415.m04690 zinc finger (C3HC4-type RING finger) fa... 34 0.10
At2g38185.1 68415.m04689 zinc finger (C3HC4-type RING finger) fa... 34 0.10
At1g53190.1 68414.m06028 zinc finger (C3HC4-type RING finger) fa... 34 0.10
At1g18780.1 68414.m02341 zinc finger (C3HC4-type RING finger) fa... 34 0.10
At5g51450.1 68418.m06378 zinc finger (C3HC4-type RING finger) fa... 34 0.13
At5g37270.1 68418.m04477 zinc finger (C3HC4-type RING finger) fa... 34 0.13
At5g19080.1 68418.m02268 zinc finger (C3HC4-type RING finger) fa... 34 0.13
At4g25230.2 68417.m03631 zinc finger (C3HC4-type RING finger) fa... 34 0.13
At4g25230.1 68417.m03630 zinc finger (C3HC4-type RING finger) fa... 34 0.13
At4g05350.1 68417.m00817 zinc finger (C3HC4-type RING finger) fa... 34 0.13
At3g43180.1 68416.m04557 zinc finger (C3HC4-type RING finger) fa... 34 0.13
At1g62370.1 68414.m07037 zinc finger (C3HC4-type RING finger) fa... 34 0.13
At1g57820.2 68414.m06561 zinc finger (C3HC4-type RING finger) fa... 34 0.13
At1g57820.1 68414.m06560 zinc finger (C3HC4-type RING finger) fa... 34 0.13
At5g59550.1 68418.m07462 zinc finger (C3HC4-type RING finger) fa... 33 0.18
At5g42200.1 68418.m05136 zinc finger (C3HC4-type RING finger) fa... 33 0.18
At5g41350.1 68418.m05025 zinc finger (C3HC4-type RING finger) fa... 33 0.18
At5g38895.1 68418.m04704 zinc finger (C3HC4-type RING finger) fa... 33 0.18
At5g37250.1 68418.m04475 zinc finger (C3HC4-type RING finger) fa... 33 0.18
At4g38140.1 68417.m05385 zinc finger (C3HC4-type RING finger) fa... 33 0.18
At4g23450.1 68417.m03380 zinc finger (C3HC4-type RING finger) fa... 33 0.18
At4g17920.1 68417.m02670 zinc finger (C3HC4-type RING finger) fa... 33 0.18
At4g17245.1 68417.m02593 zinc finger (C3HC4-type RING finger) fa... 33 0.18
At4g09120.1 68417.m01505 zinc finger (C3HC4-type RING finger) fa... 33 0.18
At3g58720.1 68416.m06545 zinc finger (C3HC4-type RING finger) fa... 33 0.18
At3g07120.1 68416.m00848 zinc finger (C3HC4-type RING finger) fa... 33 0.18
At2g42350.1 68415.m05241 zinc finger (C3HC4-type RING finger) fa... 33 0.18
At2g39100.1 68415.m04804 zinc finger (C3HC4-type RING finger) fa... 33 0.18
At2g27940.1 68415.m03387 zinc finger (C3HC4-type RING finger) fa... 33 0.18
At1g72310.1 68414.m08359 zinc finger (C3HC4-type RING finger) fa... 33 0.18
At1g20823.1 68414.m02608 zinc finger (C3HC4-type RING finger) fa... 33 0.18
At1g18770.1 68414.m02340 zinc finger (C3HC4-type RING finger) fa... 33 0.18
At1g18760.1 68414.m02339 zinc finger (C3HC4-type RING finger) fa... 33 0.18
At5g05530.1 68418.m00600 zinc finger (C3HC4-type RING finger) fa... 33 0.23
At4g10160.1 68417.m01662 zinc finger (C3HC4-type RING finger) fa... 33 0.23
At4g10150.1 68417.m01660 zinc finger (C3HC4-type RING finger) fa... 33 0.23
At4g01023.1 68417.m00138 zinc finger (C3HC4-type RING finger) fa... 33 0.23
At3g45470.1 68416.m04910 zinc finger protein-related contains lo... 33 0.23
At2g20650.2 68415.m02422 zinc finger (C3HC4-type RING finger) fa... 33 0.23
At2g20650.1 68415.m02421 zinc finger (C3HC4-type RING finger) fa... 33 0.23
At1g60360.1 68414.m06796 zinc finger (C3HC4-type RING finger) fa... 33 0.23
At1g53820.1 68414.m06126 zinc finger (C3HC4-type RING finger) fa... 33 0.23
At1g33480.1 68414.m04144 zinc finger (C3HC4-type RING finger) fa... 33 0.23
At1g04790.1 68414.m00475 zinc finger (C3HC4-type RING finger) fa... 33 0.23
At5g41450.1 68418.m05034 zinc finger (C3HC4-type RING finger) fa... 33 0.31
At5g37230.1 68418.m04472 zinc finger (C3HC4-type RING finger) fa... 33 0.31
At5g06490.1 68418.m00728 zinc finger (C3HC4-type RING finger) fa... 33 0.31
At5g05810.1 68418.m00639 zinc finger (C3HC4-type RING finger) fa... 33 0.31
At4g35480.1 68417.m05042 zinc finger (C3HC4-type RING finger) fa... 33 0.31
At4g17910.1 68417.m02669 zinc finger (C3HC4-type RING finger) fa... 33 0.31
At4g12190.1 68417.m01936 zinc finger (C3HC4-type RING finger) fa... 33 0.31
At5g64920.1 68418.m08166 COP1-interacting protein (CIP8) / zinc ... 32 0.41
At5g40250.1 68418.m04883 zinc finger (C3HC4-type RING finger) fa... 32 0.41
At5g15790.2 68418.m01847 zinc finger (C3HC4-type RING finger) fa... 32 0.41
At5g15790.1 68418.m01846 zinc finger (C3HC4-type RING finger) fa... 32 0.41
At5g10380.1 68418.m01204 zinc finger (C3HC4-type RING finger) fa... 32 0.41
At5g07040.1 68418.m00797 zinc finger (C3HC4-type RING finger) fa... 32 0.41
At5g04460.1 68418.m00443 expressed protein 32 0.41
At5g01880.1 68418.m00107 zinc finger (C3HC4-type RING finger) fa... 32 0.41
At4g21350.1 68417.m03084 U-box domain-containing protein similar... 32 0.41
At4g11370.1 68417.m01833 zinc finger (C3HC4-type RING finger) fa... 32 0.41
At4g11360.1 68417.m01832 zinc finger (C3HC4-type RING finger) fa... 32 0.41
At4g09110.1 68417.m01503 zinc finger (C3HC4-type RING finger) fa... 32 0.41
At3g54780.2 68416.m06062 zinc finger (C3HC4-type RING finger) fa... 32 0.41
At3g54780.1 68416.m06061 zinc finger (C3HC4-type RING finger) fa... 32 0.41
At3g02290.2 68416.m00211 zinc finger (C3HC4-type RING finger) fa... 32 0.41
At3g02290.1 68416.m00210 zinc finger (C3HC4-type RING finger) fa... 32 0.41
At1g68070.1 68414.m07776 zinc finger (C3HC4-type RING finger) fa... 32 0.41
At1g61620.1 68414.m06943 expressed protein contains Pfam profile... 32 0.41
At1g12760.1 68414.m01481 zinc finger (C3HC4-type RING finger) fa... 32 0.41
At1g05890.1 68414.m00617 zinc finger protein-related contains lo... 32 0.41
At5g63750.1 68418.m08001 IBR domain-containing protein contains ... 32 0.54
At5g20570.1 68418.m02442 ring-box protein-related similar to rin... 32 0.54
At5g05910.1 68418.m00653 zinc finger (C3HC4-type RING finger) fa... 32 0.54
At5g03200.1 68418.m00268 zinc finger (C3HC4-type RING finger) fa... 32 0.54
At3g55530.1 68416.m06166 zinc finger (C3HC4-type RING finger) fa... 32 0.54
At3g43750.1 68416.m04674 zinc finger (C3HC4-type RING finger) fa... 32 0.54
At3g42830.1 68416.m04485 ring-box protein Roc1/Rbx1/Hrt1, putati... 32 0.54
At3g15740.1 68416.m01994 zinc finger (C3HC4-type RING finger) fa... 32 0.54
At3g15070.1 68416.m01906 zinc finger (C3HC4-type RING finger) fa... 32 0.54
At3g01650.1 68416.m00096 copine-related low similarity to SP|Q99... 32 0.54
At2g35910.1 68415.m04408 zinc finger (C3HC4-type RING finger) fa... 32 0.54
At2g35420.1 68415.m04341 zinc finger (C3HC4-type RING finger) fa... 32 0.54
At2g17730.1 68415.m02054 zinc finger (C3HC4-type RING finger) fa... 32 0.54
At2g01735.1 68415.m00102 zinc finger (C3HC4-type RING finger) fa... 32 0.54
At1g72220.1 68414.m08350 zinc finger (C3HC4-type RING finger) fa... 32 0.54
At1g51930.1 68414.m05854 zinc finger (C3HC4-type RING finger) fa... 32 0.54
At5g63760.2 68418.m08003 IBR domain-containing protein contains ... 31 0.71
At5g63760.1 68418.m08002 IBR domain-containing protein contains ... 31 0.71
At5g60250.1 68418.m07552 zinc finger (C3HC4-type RING finger) fa... 31 0.71
At5g57750.1 68418.m07219 zinc finger (C3HC4-type RING finger) fa... 31 0.71
At5g42940.1 68418.m05235 zinc finger (C3HC4-type RING finger) fa... 31 0.71
At4g35840.1 68417.m05091 zinc finger (C3HC4-type RING finger) fa... 31 0.71
At4g28370.1 68417.m04061 zinc finger (C3HC4-type RING finger) fa... 31 0.71
At2g18670.1 68415.m02175 zinc finger (C3HC4-type RING finger) fa... 31 0.71
At2g15580.1 68415.m01784 zinc finger (C3HC4-type RING finger) fa... 31 0.71
At1g74410.1 68414.m08620 zinc finger (C3HC4-type RING finger) fa... 31 0.71
At1g63170.1 68414.m07139 zinc finger (C3HC4-type RING finger) fa... 31 0.71
At1g28040.1 68414.m03433 zinc finger (C3HC4-type RING finger) fa... 31 0.71
At1g26800.1 68414.m03266 zinc finger (C3HC4-type RING finger) fa... 31 0.71
At1g14200.1 68414.m01680 zinc finger (C3HC4-type RING finger) fa... 31 0.71
At5g20910.1 68418.m02483 zinc finger (C3HC4-type RING finger) fa... 31 0.94
At5g08139.1 68418.m00949 zinc finger (C3HC4-type RING finger) fa... 31 0.94
At4g34040.1 68417.m04830 zinc finger (C3HC4-type RING finger) fa... 31 0.94
At4g11680.1 68417.m01866 zinc finger (C3HC4-type RING finger) fa... 31 0.94
At3g47180.1 68416.m05123 zinc finger (C3HC4-type RING finger) fa... 31 0.94
At3g46620.1 68416.m05061 zinc finger (C3HC4-type RING finger) fa... 31 0.94
At2g46160.1 68415.m05740 zinc finger (C3HC4-type RING finger) fa... 31 0.94
At2g42360.1 68415.m05242 zinc finger (C3HC4-type RING finger) fa... 31 0.94
At1g74620.1 68414.m08642 zinc finger (C3HC4-type RING finger) fa... 31 0.94
At1g45180.1 68414.m05180 zinc finger (C3HC4-type RING finger) fa... 31 0.94
At5g63730.1 68418.m07999 IBR domain-containing protein contains ... 31 1.2
At5g55970.2 68418.m06981 zinc finger (C3HC4-type RING finger) fa... 31 1.2
At5g55970.1 68418.m06980 zinc finger (C3HC4-type RING finger) fa... 31 1.2
At5g41430.1 68418.m05032 zinc finger (C3HC4-type RING finger) fa... 31 1.2
At5g08730.1 68418.m01037 IBR domain-containing protein contains ... 31 1.2
At5g01520.2 68418.m00066 zinc finger (C3HC4-type RING finger) fa... 31 1.2
At4g39350.1 68417.m05570 cellulose synthase, catalytic subunit (... 31 1.2
At4g33565.1 68417.m04770 zinc finger (C3HC4-type RING finger) fa... 31 1.2
At4g31450.1 68417.m04469 zinc finger (C3HC4-type RING finger) fa... 31 1.2
At4g30370.1 68417.m04315 zinc finger (C3HC4-type RING finger) fa... 31 1.2
At4g12210.1 68417.m01938 zinc finger (C3HC4-type RING finger) fa... 31 1.2
At3g61550.1 68416.m06894 zinc finger (C3HC4-type RING finger) fa... 31 1.2
At3g08505.2 68416.m00987 zinc finger (CCCH-type/C3HC4-type RING ... 31 1.2
At3g08505.1 68416.m00986 zinc finger (CCCH-type/C3HC4-type RING ... 31 1.2
At3g05870.1 68416.m00660 zinc finger (C3HC4-type RING finger) fa... 31 1.2
At2g38970.1 68415.m04789 zinc finger (C3HC4-type RING finger) fa... 31 1.2
At1g67800.3 68414.m07738 copine-related low similarity to SP|Q99... 31 1.2
At1g67800.2 68414.m07739 copine-related low similarity to SP|Q99... 31 1.2
At1g67800.1 68414.m07737 copine-related low similarity to SP|Q99... 31 1.2
At1g59560.1 68414.m06698 expressed protein contains similarity t... 31 1.2
At5g64740.1 68418.m08141 cellulose synthase, catalytic subunit, ... 30 1.6
At5g06420.2 68418.m00719 zinc finger (CCCH-type/C3HC4-type RING ... 30 1.6
At5g06420.1 68418.m00718 zinc finger (CCCH-type/C3HC4-type RING ... 30 1.6
At4g32600.1 68417.m04642 zinc finger (C3HC4-type RING finger) fa... 30 1.6
At4g12140.1 68417.m01928 zinc finger (C3HC4-type RING finger) fa... 30 1.6
At4g00335.2 68417.m00044 zinc finger (C3HC4-type RING finger) fa... 30 1.6
At4g00335.1 68417.m00043 zinc finger (C3HC4-type RING finger) fa... 30 1.6
At2g31510.1 68415.m03850 IBR domain-containing protein / ARIADNE... 30 1.6
At5g37200.1 68418.m04466 zinc finger (C3HC4-type RING finger) fa... 30 2.2
At5g23110.1 68418.m02703 zinc finger (C3HC4-type RING finger) fa... 30 2.2
At4g33940.1 68417.m04816 zinc finger (C3HC4-type RING finger) fa... 30 2.2
At3g63530.1 68416.m07156 zinc finger (C3HC4-type RING finger) fa... 30 2.2
At3g45570.1 68416.m04922 zinc finger (C3HC4-type RING finger) fa... 30 2.2
At3g45560.1 68416.m04921 zinc finger (C3HC4-type RING finger) fa... 30 2.2
At3g10815.1 68416.m01302 zinc finger (C3HC4-type RING finger) fa... 30 2.2
At2g26135.1 68415.m03136 zinc finger (C3HC4-type RING finger) fa... 30 2.2
At2g15530.2 68415.m01778 zinc finger (C3HC4-type RING finger) fa... 30 2.2
At2g15530.1 68415.m01777 zinc finger (C3HC4-type RING finger) fa... 30 2.2
At1g01350.1 68414.m00050 zinc finger (CCCH-type/C3HC4-type RING ... 30 2.2
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 29 2.9
At5g01980.1 68418.m00117 zinc finger (C3HC4-type RING finger) fa... 29 2.9
At2g35000.1 68415.m04294 zinc finger (C3HC4-type RING finger) fa... 29 2.9
At2g25360.1 68415.m03035 zinc finger protein-related contains we... 29 2.9
At1g70910.1 68414.m08182 zinc finger (C3HC4-type RING finger) fa... 29 2.9
At1g63900.1 68414.m07235 zinc finger (C3HC4-type RING finger) fa... 29 2.9
At1g57730.1 68414.m06550 zinc finger (C3HC4-type RING finger) fa... 29 2.9
At5g67120.1 68418.m08462 zinc finger (C3HC4-type RING finger) fa... 29 3.8
At5g63740.1 68418.m08000 zinc finger protein-related 29 3.8
At5g41440.1 68418.m05033 zinc finger (C3HC4-type RING finger) fa... 29 3.8
At4g18110.1 68417.m02693 zinc finger (C3HC4-type RING finger) fa... 29 3.8
At3g60220.1 68416.m06730 zinc finger (C3HC4-type RING finger) fa... 29 3.8
At3g45580.1 68416.m04923 zinc finger (C3HC4-type RING finger) fa... 29 3.8
At3g45555.1 68416.m04920 zinc finger (C3HC4-type RING finger) fa... 29 3.8
At2g44330.1 68415.m05514 zinc finger (C3HC4-type RING finger) fa... 29 3.8
At2g25410.1 68415.m03043 hypothetical protein 29 3.8
At1g49230.1 68414.m05519 zinc finger (C3HC4-type RING finger) fa... 29 3.8
At1g22510.1 68414.m02812 zinc finger (C3HC4-type RING finger) fa... 29 3.8
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 29 3.8
At1g15100.1 68414.m01803 zinc finger (C3HC4-type RING finger) fa... 29 3.8
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 29 5.0
At4g30400.1 68417.m04318 zinc finger (C3HC4-type RING finger) fa... 29 5.0
At4g26580.1 68417.m03832 zinc finger (C3HC4-type RING finger) fa... 29 5.0
At3g19390.1 68416.m02459 cysteine proteinase, putative / thiol p... 29 5.0
At1g65430.1 68414.m07423 zinc finger protein-related contains we... 29 5.0
At5g24870.2 68418.m02943 zinc finger (C3HC4-type RING finger) fa... 28 6.6
At5g24870.1 68418.m02942 zinc finger (C3HC4-type RING finger) fa... 28 6.6
At5g13530.1 68418.m01562 protein kinase family protein / ankyrin... 28 6.6
At5g09870.1 68418.m01141 cellulose synthase, catalytic subunit, ... 28 6.6
At5g05490.2 68418.m00593 cohesion family protein SYN1, splice va... 28 6.6
At5g05490.1 68418.m00592 cohesion family protein SYN1, splice va... 28 6.6
At5g05280.1 68418.m00567 zinc finger (C3HC4-type RING finger) fa... 28 6.6
At4g33850.1 68417.m04803 glycosyl hydrolase family 10 protein si... 28 6.6
At3g47990.1 68416.m05232 zinc finger (C3HC4-type RING finger) fa... 28 6.6
At3g45630.1 68416.m04928 RNA recognition motif (RRM)-containing ... 28 6.6
At2g37950.1 68415.m04658 zinc finger (C3HC4-type RING finger) fa... 28 6.6
At2g28530.1 68415.m03466 RNA recognition motif (RRM)-containing ... 28 6.6
At2g01150.1 68415.m00024 zinc finger (C3HC4-type RING finger) fa... 28 6.6
At1g23980.1 68414.m03028 zinc finger (C3HC4-type RING finger) fa... 28 6.6
At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 ... 28 8.8
At5g05170.1 68418.m00550 cellulose synthase, catalytic subunit (... 28 8.8
At4g19670.1 68417.m02889 zinc finger (C3HC4-type RING finger) fa... 28 8.8
At3g61460.1 68416.m06883 zinc finger (C3HC4-type RING finger) fa... 28 8.8
At3g57930.1 68416.m06457 expressed protein 28 8.8
At3g45540.1 68416.m04918 zinc finger (C3HC4-type RING finger) fa... 28 8.8
At3g26320.1 68416.m03284 cytochrome P450 71B36, putative (CYP71B... 28 8.8
At3g13330.1 68416.m01678 expressed protein 28 8.8
At2g46495.1 68415.m05788 zinc finger (C3HC4-type RING finger) fa... 28 8.8
At2g39720.1 68415.m04874 zinc finger (C3HC4-type RING finger) fa... 28 8.8
At2g01650.1 68415.m00091 zinc finger (C2H2 type) family protein ... 28 8.8
At1g80400.1 68414.m09412 zinc finger (C3HC4-type RING finger) fa... 28 8.8
At1g57800.1 68414.m06558 zinc finger (C3HC4-type RING finger) fa... 28 8.8
At1g54150.1 68414.m06173 zinc finger (C3HC4-type RING finger) fa... 28 8.8
At1g11950.1 68414.m01381 transcription factor jumonji (jmjC) dom... 28 8.8
>At1g19310.1 68414.m02401 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 226
Score = 113 bits (271), Expect = 2e-25
Identities = 48/91 (52%), Positives = 63/91 (69%), Gaps = 6/91 (6%)
Frame = +3
Query: 177 HDERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPL 356
+D ECNICLD A+D +V++CGHLFCWPCL++WL + CPVCKA I ++++PL
Sbjct: 16 NDSSNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHLHSQSKDCPVCKAVIEEDRLVPL 75
Query: 357 YGRGNTKQEDPRNK------VPPRPAGQRTE 431
YGRG + DPR+K VP RP+GQR E
Sbjct: 76 YGRGKS-SADPRSKSIPGLEVPNRPSGQRPE 105
>At2g23780.1 68415.m02840 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 227
Score = 110 bits (264), Expect = 1e-24
Identities = 46/85 (54%), Positives = 59/85 (69%), Gaps = 6/85 (7%)
Frame = +3
Query: 195 ECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPLYGRGNT 374
ECNIC + A+D +V++CGHLFCWPCL++WL Q CPVCKA + +K++PLYGRG
Sbjct: 27 ECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQECPVCKAVVQDDKLVPLYGRGK- 85
Query: 375 KQEDPRNK------VPPRPAGQRTE 431
Q DPR+K +P RP GQR E
Sbjct: 86 NQTDPRSKRYPGLRIPNRPTGQRPE 110
>At4g03510.2 68417.m00479 zinc finger (C3HC4-type RING finger)
family protein (RMA1) identical to RING zinc finger
protein RMA1 gi:3164222
Length = 249
Score = 103 bits (247), Expect = 1e-22
Identities = 42/89 (47%), Positives = 60/89 (67%), Gaps = 9/89 (10%)
Frame = +3
Query: 180 DERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETR--------PSRQVCPVCKAAIS 335
D+ +CNICLD+ ++ VV++CGHLFCWPC+H+WL+ + + CPVCK+ +S
Sbjct: 42 DDSNFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVS 101
Query: 336 REKVIPLYGRGN-TKQEDPRNKVPPRPAG 419
++PLYGRG T QE+ +N VP RP G
Sbjct: 102 HSTLVPLYGRGRCTTQEEGKNSVPKRPVG 130
>At4g03510.1 68417.m00478 zinc finger (C3HC4-type RING finger)
family protein (RMA1) identical to RING zinc finger
protein RMA1 gi:3164222
Length = 249
Score = 103 bits (247), Expect = 1e-22
Identities = 42/89 (47%), Positives = 60/89 (67%), Gaps = 9/89 (10%)
Frame = +3
Query: 180 DERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETR--------PSRQVCPVCKAAIS 335
D+ +CNICLD+ ++ VV++CGHLFCWPC+H+WL+ + + CPVCK+ +S
Sbjct: 42 DDSNFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVS 101
Query: 336 REKVIPLYGRGN-TKQEDPRNKVPPRPAG 419
++PLYGRG T QE+ +N VP RP G
Sbjct: 102 HSTLVPLYGRGRCTTQEEGKNSVPKRPVG 130
>At1g74990.1 68414.m08705 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger)
Length = 137
Score = 101 bits (241), Expect = 8e-22
Identities = 43/84 (51%), Positives = 55/84 (65%), Gaps = 6/84 (7%)
Frame = +3
Query: 198 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPLYGRGNTK 377
CNICL+ AR+ +V++CGHLFCWPCL++WL CPVCKA + + ++PLYG G
Sbjct: 19 CNICLELAREPIVTLCGHLFCWPCLYKWLHYHSKSNHCPVCKALVKEDTLVPLYGMGK-P 77
Query: 378 QEDPRNK------VPPRPAGQRTE 431
DPR+K VP RPA RTE
Sbjct: 78 SSDPRSKLNSGVTVPNRPAATRTE 101
>At3g58030.3 68416.m06469 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 436
Score = 100 bits (240), Expect = 1e-21
Identities = 41/87 (47%), Positives = 60/87 (68%), Gaps = 3/87 (3%)
Frame = +3
Query: 180 DERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPLY 359
D +CNICLD +++ V++ CGHL+CWPCL+QWL+ +++ CPVCK ++ + V P+Y
Sbjct: 133 DGNFFDCNICLDLSKEPVLTCCGHLYCWPCLYQWLQISDAKE-CPVCKGEVTSKTVTPIY 191
Query: 360 GRGNTKQEDPRN---KVPPRPAGQRTE 431
GRGN K+E + KVP RP +R E
Sbjct: 192 GRGNHKREIEESLDTKVPMRPHARRIE 218
>At3g58030.2 68416.m06468 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 436
Score = 100 bits (240), Expect = 1e-21
Identities = 41/87 (47%), Positives = 60/87 (68%), Gaps = 3/87 (3%)
Frame = +3
Query: 180 DERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPLY 359
D +CNICLD +++ V++ CGHL+CWPCL+QWL+ +++ CPVCK ++ + V P+Y
Sbjct: 133 DGNFFDCNICLDLSKEPVLTCCGHLYCWPCLYQWLQISDAKE-CPVCKGEVTSKTVTPIY 191
Query: 360 GRGNTKQEDPRN---KVPPRPAGQRTE 431
GRGN K+E + KVP RP +R E
Sbjct: 192 GRGNHKREIEESLDTKVPMRPHARRIE 218
>At3g58030.1 68416.m06467 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 436
Score = 100 bits (240), Expect = 1e-21
Identities = 41/87 (47%), Positives = 60/87 (68%), Gaps = 3/87 (3%)
Frame = +3
Query: 180 DERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPLY 359
D +CNICLD +++ V++ CGHL+CWPCL+QWL+ +++ CPVCK ++ + V P+Y
Sbjct: 133 DGNFFDCNICLDLSKEPVLTCCGHLYCWPCLYQWLQISDAKE-CPVCKGEVTSKTVTPIY 191
Query: 360 GRGNTKQEDPRN---KVPPRPAGQRTE 431
GRGN K+E + KVP RP +R E
Sbjct: 192 GRGNHKREIEESLDTKVPMRPHARRIE 218
>At2g42030.1 68415.m05198 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 425
Score = 97.9 bits (233), Expect = 7e-21
Identities = 42/92 (45%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Frame = +3
Query: 180 DERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPLY 359
D +C ICLD ++D VV+ CGHL+CW CL+QWL+ +++ CPVCK +S + V P+Y
Sbjct: 135 DGSFFDCYICLDLSKDPVVTNCGHLYCWSCLYQWLQVSEAKE-CPVCKGEVSVKTVTPIY 193
Query: 360 GRGNTKQED---PRNKVPPRPAGQRTEPESTS 446
GRG K+E K+P RP +RTE T+
Sbjct: 194 GRGIQKRESEEVSNTKIPSRPQARRTESLRTT 225
>At4g28270.1 68417.m04049 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 193
Score = 88.6 bits (210), Expect = 4e-18
Identities = 41/88 (46%), Positives = 53/88 (60%), Gaps = 13/88 (14%)
Frame = +3
Query: 195 ECNICLDTARDAVVSMCGHLFCWPCLHQW-LETRPSRQ------------VCPVCKAAIS 335
+CNICLD RD VV++CGHLFCWPC+H+W + SRQ CPVCK+ +S
Sbjct: 20 DCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPPKCPVCKSDVS 79
Query: 336 REKVIPLYGRGNTKQEDPRNKVPPRPAG 419
++P+YGRG + N VP RP G
Sbjct: 80 EATLVPIYGRGQKAPQSGSN-VPSRPTG 106
>At4g27470.1 68417.m03947 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 243
Score = 87.0 bits (206), Expect = 1e-17
Identities = 41/90 (45%), Positives = 56/90 (62%), Gaps = 16/90 (17%)
Frame = +3
Query: 195 ECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPS-------RQVCPVCKAAISREKVIP 353
+CNICLDTA D VV++CGHLFCWPC+++WL + S + CPVCK+ I+ ++P
Sbjct: 43 DCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSVDQHQNNCPVCKSNITITSLVP 102
Query: 354 LYGR---------GNTKQEDPRNKVPPRPA 416
LYGR G+ KQ+ +P RPA
Sbjct: 103 LYGRGMSSPSSTFGSKKQDALSTDIPRRPA 132
>At2g44410.1 68415.m05523 expressed protein
Length = 413
Score = 78.2 bits (184), Expect = 6e-15
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Frame = +3
Query: 195 ECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPLYGRGN- 371
+CNICL+ A D +++ CGHLFCW C +Q + + CPVC ++ +VIP+YG G+
Sbjct: 124 DCNICLEKAEDPILTCCGHLFCWGCFYQLPLIYLNIKECPVCDGEVTDAEVIPIYGNGDD 183
Query: 372 -----TKQEDPRNKVPPRPAGQRTE 431
K ED +PPRP +R E
Sbjct: 184 CDGTKPKLEDCGISLPPRPNAKRVE 208
>At2g26350.1 68415.m03163 zinc-binding peroxisomal integral membrane
protein (PEX10) identical to zinc-binding peroxisomal
integral membrane protein GI:4337011 from [Arabidopsis
thaliana]
Length = 381
Score = 54.4 bits (125), Expect = 9e-08
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +3
Query: 183 ERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPLY 359
E + +C +CL T + + CGH+FCW C+ +W +Q CP+C+ + ++ LY
Sbjct: 322 EAVGKCTLCLSTRQHPTATPCGHVFCWSCIMEWCN---EKQECPLCRTPNTHSSLVCLY 377
>At2g44950.1 68415.m05596 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 878
Score = 52.0 bits (119), Expect = 5e-07
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +3
Query: 183 ERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPLY 359
+ +L+C C D ++ V++ C HLFC PC+ + TR + CP C A+ + P+Y
Sbjct: 821 KEILKCKACNDRPKEVVITKCYHLFCNPCVQKLTGTRQKK--CPTCSASFGPNDIKPIY 877
>At1g55255.1 68414.m06311 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 383
Score = 48.0 bits (109), Expect = 8e-06
Identities = 20/58 (34%), Positives = 32/58 (55%)
Frame = +3
Query: 174 KHDERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKV 347
K+ + +L+C +C D ++ V+ C HLFC C+ + LE R + CP C A + V
Sbjct: 323 KNCKNILKCGVCFDRPKEVVIVKCYHLFCQQCIQRSLEIR--HRKCPGCGTAFGQNDV 378
>At5g43530.1 68418.m05322 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger domain-containing
protein similar to SP|P36607 DNA repair protein rad8
{Schizosaccharomyces pombe}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain, PF00097: Zinc finger,
C3HC4 type (RING finger)
Length = 1277
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +3
Query: 180 DERMLECNICLDTARDAVVSMCGHLFCWPC-LHQWLETRPSRQVCPVCKAAISREKVI 350
D EC ICL++A D V++ C H C C L W PS +CP+C+ + R ++I
Sbjct: 1034 DGNSKECPICLESADDPVLTPCAHRMCRECLLTSW--RSPSCGLCPICRTILKRTELI 1089
>At4g01270.1 68417.m00168 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 506
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Frame = +3
Query: 198 CNICLDTARDAV-----VSMCGHLFCWPCLHQWLETRPS--RQVCPVCKAAISREKVIPL 356
C+IC + + V +S CGH+F CL QW E PS ++ CP+CK S + L
Sbjct: 12 CSICYEDLKPVVENLQSISACGHVFHELCLQQWFEYCPSTNKRNCPICKQKCSLKDPCRL 71
Query: 357 YGRGNTKQED 386
Y + + Q D
Sbjct: 72 YFQSSGNQTD 81
>At5g22750.1 68418.m02657 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to SP|P36607 DNA
repair protein rad8 {Schizosaccharomyces pombe};
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 1029
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 195 ECNICLDTARDAVVSMCGHLFCWPC-LHQWLETRPSRQVCPVCKAAISREKVI 350
EC ICL+ DAV++ C H C C L W + + +CPVC+ +S++++I
Sbjct: 793 ECPICLEALEDAVLTPCAHRLCRECLLASWRNS--TSGLCPVCRNTVSKQELI 843
>At5g05130.1 68418.m00544 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to transcription
factor RUSH-1alpha [Oryctolagus cuniculus] GI:1655930;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 862
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Frame = +3
Query: 180 DERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVI--- 350
D +C IC+ + +++ C H+FC C+ Q L+ S+ +CP+C+ ++++ +
Sbjct: 610 DGEDFDCPICISPPTNIIITRCAHIFCRACILQTLQR--SKPLCPLCRGSLTQSDLYNAP 667
Query: 351 -PLYGRGNTKQEDPRN 395
P NT ED ++
Sbjct: 668 PPPPDSSNTDGEDAKS 683
>At5g01520.1 68418.m00067 zinc finger (C3HC4-type RING finger)
family protein similar to MTD2 [Medicago truncatula]
GI:9294812; contains Pfam profile PF00097: Zinc finger,
C3HC4 type (RING finger)
Length = 242
Score = 44.4 bits (100), Expect = 9e-05
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +3
Query: 183 ERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISR 338
ER EC ICL+ V+ C H C C W R Q CP C+ ++ R
Sbjct: 141 EREEECGICLEIRNKVVLPTCNHSMCINCYRNW---RARSQSCPFCRGSLKR 189
>At3g26730.1 68416.m03342 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 772
Score = 44.4 bits (100), Expect = 9e-05
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Frame = +3
Query: 192 LECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSR------QVCPVCKAAISREKVIP 353
++C ICL+ ++ CGH+FC+PC+ Q+L T + CP+C IS ++
Sbjct: 243 VQCPICLEYPLCPQITSCGHIFCFPCILQYLLTGVDNHKVDCFKRCPLCFVMISPRELYT 302
Query: 354 LYGRGNTKQ 380
+Y N KQ
Sbjct: 303 VYIE-NVKQ 310
>At1g11100.1 68414.m01271 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
similar to RUSH-1alpha [Oryctolagus cuniculus]
GI:1655930; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain
Length = 1226
Score = 44.4 bits (100), Expect = 9e-05
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Frame = +3
Query: 198 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPV--CKAAI 332
C IC +DAVVS+CGH+FC C+ + L TR + Q CP+ CK +
Sbjct: 919 CGICNVAPKDAVVSLCGHVFCNQCICECL-TRDNNQ-CPLSYCKVGL 963
>At5g03450.1 68418.m00300 zinc finger (C3HC4-type RING finger)
family protein
Length = 630
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Frame = +3
Query: 180 DERMLECNICLDT----ARDAVVSM-CGHLFCWPCLHQWLETRPSRQVCPVCKAAISREK 344
D L C+IC++ + V + CGHL+ + C+++W + R S CP+C S
Sbjct: 114 DTEGLSCSICMEVWTSGGQHQVCCLPCGHLYGYSCINKWFQQRRSGGKCPLCNKICSLRD 173
Query: 345 VIPLYGRGNTKQEDPRNK 398
V +Y +D +K
Sbjct: 174 VRKIYASRVAAVDDEAHK 191
>At3g23280.2 68416.m02935 zinc finger (C3HC4-type RING finger)
family protein / ankyrin repeat family protein contains
Pfam profile: PF00097 zinc finger, C3HC4 type (RING
finger) and Pfam profile: PF00023 ankyrin repeat
Length = 438
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/63 (41%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 174 KHDERMLECNICLDTARDAVVSMCGHLF-CWPCLHQWLETRPSRQVCPVCKAAISREKVI 350
K D C ICLD +AV CGH+ C CL E + CPVC+A I ++VI
Sbjct: 379 KEDGNTGTCAICLDAPSEAVCVPCGHVAGCMSCLK---EIKSKNWGCPVCRAKI--DQVI 433
Query: 351 PLY 359
LY
Sbjct: 434 KLY 436
>At3g23280.1 68416.m02934 zinc finger (C3HC4-type RING finger)
family protein / ankyrin repeat family protein contains
Pfam profile: PF00097 zinc finger, C3HC4 type (RING
finger) and Pfam profile: PF00023 ankyrin repeat
Length = 462
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/63 (41%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 174 KHDERMLECNICLDTARDAVVSMCGHLF-CWPCLHQWLETRPSRQVCPVCKAAISREKVI 350
K D C ICLD +AV CGH+ C CL E + CPVC+A I ++VI
Sbjct: 403 KEDGNTGTCAICLDAPSEAVCVPCGHVAGCMSCLK---EIKSKNWGCPVCRAKI--DQVI 457
Query: 351 PLY 359
LY
Sbjct: 458 KLY 460
>At3g16090.1 68416.m02033 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 492
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = +3
Query: 198 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
C IC + +A +CGHLF CL WLE +Q CP C+A +
Sbjct: 292 CIICREEMTNAKKLICGHLFHVHCLRSWLE---RQQTCPTCRALV 333
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +3
Query: 183 ERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIP 353
++ L C IC+ +DA ++ CGH FC+ C+ L + CP C ++ ++ P
Sbjct: 47 DKDLLCPICMQIIKDAFLTACGHSFCYMCIITHLRNKSD---CPCCSQHLTNNQLYP 100
>At1g50410.1 68414.m05650 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to transcription
factor RUSH-1alpha [Oryctolagus cuniculus] GI:1655930;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 981
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 198 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKV 347
C +C D D VV++CGH+FC+ C+ ++ P C+ ++ + V
Sbjct: 679 CCVCHDPPEDPVVTLCGHIFCYQCVSDYITGDEDTCPAPRCREQLAHDVV 728
>At4g10940.1 68417.m01779 PHD finger family protein contains Pfam
profile: PF00097 zinc finger, C3HC4 type
Length = 192
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +3
Query: 198 CNICLDTARD-AVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPLYGRGNT 374
C IC+D D V+ C H FC+ C+ W +CP+C+ +P++ G +
Sbjct: 31 CGICMDIIIDRGVLDCCQHWFCFECIDNW---STIMNLCPLCQREFQLITCVPVFDSGES 87
Query: 375 KQED 386
+ D
Sbjct: 88 SKVD 91
>At1g61140.1 68414.m06888 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
similar to ATPase [Homo sapiens] GI:531196; contains Pfam
profiles PF00271: Helicase conserved C-terminal domain,
PF00176: SNF2 family N-terminal domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 1287
Score = 42.7 bits (96), Expect = 3e-04
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +3
Query: 180 DERMLECNICLDTARDAVVSMCGHLFCWPCLHQWL 284
D + C IC D DAV S+CGH+FC C+++ L
Sbjct: 987 DASLAICGICNDAPEDAVASVCGHVFCKQCIYERL 1021
>At5g01960.1 68418.m00115 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 426
Score = 42.3 bits (95), Expect = 4e-04
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +3
Query: 198 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPLYGRGNT 374
C IC + ++ C H+FC C+ +W E + CP+C+A + + + +G G+T
Sbjct: 365 CAICQEKMHTPILLRCKHMFCEDCVSEWFE---RERTCPLCRALV-KPADLKSFGDGST 419
>At1g13195.1 68414.m01530 zinc finger (C3HC4-type RING finger)
family protein similar to MTD2 [Medicago truncatula]
GI:9294812; contains Pfam profile PF00097: Zinc finger,
C3HC4 type (RING finger)
Length = 260
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +3
Query: 183 ERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISR 338
ER EC ICL+T V+ C H C C W Q CP C+ ++ R
Sbjct: 157 EREEECGICLETCTKMVLPNCCHSMCIKCYRNW---NLKSQSCPFCRGSMKR 205
>At5g43420.1 68418.m05309 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 zinc finger
protein ATL4 [Arabidopsis thaliana] GI:4928399; contains
Pfam profile PF00097: Zinc finger, C3HC4 type (RING
finger)
Length = 375
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = +3
Query: 174 KHDERMLECNICLDTARDA----VVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISRE 341
+ ++R EC++CL +D ++ C HLF C+ WL+ + CP+C+ +S +
Sbjct: 130 EEEKRSQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNAN---CPLCRTRVSCD 186
Query: 342 KVIPLYGRGNTKQEDPRNKV 401
P R + P N V
Sbjct: 187 TSFP-PDRVSAPSTSPENLV 205
>At1g02860.1 68414.m00251 SPX (SYG1/Pho81/XPR1) domain-containing
protein / zinc finger (C3HC4-type RING finger)
protein-related weak similarity to tripartite motif
protein TRIM13 [Mus musculus] GI:12407427, gpStaf50
[Homo sapiens] GI:899300; contains Pfam profiles
PF03105: SPX domain, PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 335
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 8/52 (15%)
Frame = +3
Query: 192 LECNICLDTARDAVVSMCGHLFCWPC--------LHQWLETRPSRQVCPVCK 323
L C+ICLDT D + CGH++C+ C + L+T + + CP+C+
Sbjct: 229 LTCSICLDTVFDPISLTCGHIYCYMCACSAASVNVVDGLKTAEATEKCPLCR 280
>At4g21070.1 68417.m03047 BRCT domain-containing protein / zinc
finger (C3HC4-type RING finger) family protein (BRCA1)
contains Pfam profiles PF00533: BRCA1 C Terminus (BRCT)
domain, PF00097: Zinc finger, C3HC4 type (RING finger),
PF01535: PPR repeat; identical to cDNA BRCA1 GI:28372473
Length = 1276
Score = 41.5 bits (93), Expect = 7e-04
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +3
Query: 177 HDERM---LECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKV 347
H ERM L+C ICL AV C H+FC C+ +++ CPVCK R ++
Sbjct: 341 HLERMGRELKCPICLSLYNSAVSLSCNHVFCNACI---VKSMKMDATCPVCKIPYHRREI 397
>At4g08590.1 68417.m01412 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles PF00097: Zinc
finger C3HC4 type (RING finger), PF02182: YDG/SRA
domain
Length = 465
Score = 41.5 bits (93), Expect = 7e-04
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 192 LECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
L C++C V +CGH FC C +W++ Q+C C++ I
Sbjct: 107 LNCSLCNQLPDRPVTILCGHNFCLKCFDKWID--QGNQICATCRSTI 151
>At3g62690.1 68416.m07042 zinc finger (C3HC4-type RING finger)
family protein (ATL5) identical to RING-H2 zinc finger
protein ATL5 [Arabidopsis thaliana]
gi|4928401|gb|AAD33583
Length = 257
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +3
Query: 177 HDERMLECNICLDTARD----AVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
H+ + EC++CL + V+ CGH+F C+ W +R S CP+C+A +
Sbjct: 106 HESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSS---CPLCRAPV 158
>At3g16600.1 68416.m02122 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to SP|P31244 DNA
repair protein RAD16 {Saccharomyces cerevisiae};
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 638
Score = 41.5 bits (93), Expect = 7e-04
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +3
Query: 198 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPV--CKAAISREKV 347
C++C D +D VV++CGH+FC+ C+ + CP C + + + V
Sbjct: 395 CSVCSDPPKDPVVTLCGHVFCYECVS--VNINGDNNTCPALNCHSQLKHDVV 444
>At2g20030.1 68415.m02341 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 zinc finger protein
ATL6 [Arabidopsis thaliana] GI:4928403; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 390
Score = 41.1 bits (92), Expect = 9e-04
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +3
Query: 192 LECNICLDTARDA----VVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPLY 359
LEC++CL D ++ C H F C+ QWLE CP+C+ ++ E + +
Sbjct: 122 LECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLE---QHATCPLCRNRVNIEDDLSVL 178
Query: 360 GRGNT 374
G +T
Sbjct: 179 GNSST 183
>At1g05120.1 68414.m00514 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to SP|P79051 DNA
repair protein rhp16 (RAD16 homolog)
{Schizosaccharomyces pombe}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain, PF00097: Zinc finger,
C3HC4 type (RING finger)
Length = 833
Score = 41.1 bits (92), Expect = 9e-04
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +3
Query: 195 ECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAIS 335
EC +C D A D VV+ C H+FC CL + + CP C ++
Sbjct: 578 ECGLCHDPAEDYVVTSCAHVFCKACLIGF-SASLGKVTCPTCSKLLT 623
>At5g58787.1 68418.m07365 zinc finger (C3HC4-type RING finger)
family protein similar to MTD2 [Medicago truncatula]
GI:9294812; contains Pfam profile PF00097: Zinc finger,
C3HC4 type (RING finger)
Length = 242
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +3
Query: 183 ERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISR 338
ER EC IC++ V+ C H C C W R Q CP C+ ++ R
Sbjct: 139 EREEECGICMEMNSKVVLPNCTHSLCIKCYRDW---RGRSQSCPFCRDSLKR 187
>At3g20010.1 68416.m02531 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to transcription
factor RUSH-1alpha [Oryctolagus cuniculus] GI:1655930;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 1047
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +3
Query: 198 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPLYGRGNTK 377
C C + VV++CGH+FC+ C+ +++ + P CK ++R+ V N
Sbjct: 751 CYECNEPPEKPVVTLCGHIFCYECVLEYITGDENTCPVPRCKQQLARDVVFSESSLRNCT 810
Query: 378 QED 386
+D
Sbjct: 811 SDD 813
>At1g65040.2 68414.m07372 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 281
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +3
Query: 198 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
C IC + A +CGHLF CL WLE + CP C+A +
Sbjct: 113 CIICREEMTSAKKLVCGHLFHVHCLRSWLE---RQNTCPTCRALV 154
>At1g65040.1 68414.m07373 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 389
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +3
Query: 198 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
C IC + A +CGHLF CL WLE + CP C+A +
Sbjct: 221 CIICREEMTSAKKLVCGHLFHVHCLRSWLE---RQNTCPTCRALV 262
>At1g24440.1 68414.m03079 expressed protein similar to MTD2
[Medicago truncatula] GI:9294812
Length = 251
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +3
Query: 183 ERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISR 338
ER EC ICL+ V+ C H C C W + CP C+ +I R
Sbjct: 150 EREDECGICLEPCTKMVLPNCCHAMCIKCYRNW---NTKSESCPFCRGSIKR 198
>At5g39550.1 68418.m04791 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 617
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +3
Query: 174 KHDERMLE--CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISR 338
+ +++ LE C+IC+ + + CGH FC C +W + C +C++ I R
Sbjct: 119 EEEKKKLEIFCSICIQLPERPITTPCGHNFCLKCFEKW-AVGQGKLTCMICRSKIPR 174
>At1g66050.1 68414.m07497 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 623
Score = 40.3 bits (90), Expect = 0.002
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 198 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISR 338
C+IC+ V + CGH FC C +W + C +C++ I R
Sbjct: 129 CSICIQLPERPVTTPCGHNFCLKCFEKW-AVGQGKLTCMICRSKIPR 174
>At1g66040.1 68414.m07495 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 622
Score = 40.3 bits (90), Expect = 0.002
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 198 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISR 338
C+IC+ V + CGH FC C +W + C +C++ I R
Sbjct: 129 CSICIQLPERPVTTPCGHNFCLKCFEKW-AVGQGKLTCMICRSKIPR 174
>At2g38920.1 68415.m04784 SPX (SYG1/Pho81/XPR1) domain-containing
protein / zinc finger (C3HC4-type RING finger)
protein-related weak similarity to tripartite motif
protein TRIM13 [Mus musculus] GI:12407427; contains Pfam
profile PF03105: SPX domain, weak hit to PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 335
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 8/54 (14%)
Frame = +3
Query: 192 LECNICLDTARDAVVSMCGHLFCWPC--------LHQWLETRPSRQVCPVCKAA 329
L C ICL+T + CGH+FC C + Q ++ P CP+C+ A
Sbjct: 229 LTCAICLETVFNPYALKCGHIFCNSCACSAASVLIFQGIKAAPRHSKCPICREA 282
>At1g06770.1 68414.m00720 zinc finger (C3HC4-type RING finger)
family protein
Length = 421
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +3
Query: 192 LECNICLDTARDAV-VSMCGHLFCWPCLHQWLETRPSRQVCPVC 320
L C+IC + RDA +S C H FC C+++ + T + CPVC
Sbjct: 14 LSCSICDNILRDATTISECLHTFCRKCIYEKI-TEDEIETCPVC 56
>At5g47610.1 68418.m05876 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 166
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = +3
Query: 195 ECNICLDTARDA----VVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
EC ICL V+ C H F C+H+WL TR S CP C+ +I
Sbjct: 106 ECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSS---CPTCRTSI 152
>At4g14365.1 68417.m02213 zinc finger (C3HC4-type RING finger)
family protein / ankyrin repeat family protein contains
Pfam profile: PF00097 zinc finger, C3HC4 type (RING
finger) and Pfam profile: PF00023 ankyrin repeat
Length = 376
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +3
Query: 198 CNICLDTARDAVVSMCGHLF-CWPCLHQWLETRPSRQVCPVCKAAISREKVIPLY 359
C IC+D +AV CGH+ C CL E + CPVC+A I ++VI LY
Sbjct: 325 CVICVDAPSEAVCVPCGHVAGCISCLK---EIENKKMGCPVCRANI--DQVIKLY 374
>At4g28890.1 68417.m04129 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 386
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +3
Query: 174 KHDERMLECNICLDTARDA----VVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISRE 341
K ++ L+C++CL ++ C H F C+ QWLE CP+C+ +S E
Sbjct: 69 KGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLE---QHATCPLCRDRVSME 125
Query: 342 KVIPLYGRGNT 374
+ + GN+
Sbjct: 126 EDSSVLTNGNS 136
>At3g07200.1 68416.m00859 zinc finger (C3HC4-type RING finger)
family protein contains Pfam PF00097: Zinc finger, C3HC4
type (RING finger)
Length = 182
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +3
Query: 180 DERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPLY 359
+E C ICL V + CGH+FC C+ L + CP C+ I+ + +I ++
Sbjct: 121 EEPKFSCPICLCPFTQEVSTKCGHIFCKKCIKNALSLQAK---CPTCRKKITVKDLIRVF 177
>At1g18660.4 68414.m02326 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 491
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 195 ECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
+C +CL + + CGH FC CL Q ++ R ++ CP+C+ I
Sbjct: 195 DCTVCLKLLYEPATTPCGHTFCRSCLFQSMD-RGNK--CPLCRTVI 237
>At1g18660.3 68414.m02329 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 486
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 195 ECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
+C +CL + + CGH FC CL Q ++ R ++ CP+C+ I
Sbjct: 195 DCTVCLKLLYEPATTPCGHTFCRSCLFQSMD-RGNK--CPLCRTVI 237
>At1g18660.2 68414.m02328 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 486
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 195 ECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
+C +CL + + CGH FC CL Q ++ R ++ CP+C+ I
Sbjct: 195 DCTVCLKLLYEPATTPCGHTFCRSCLFQSMD-RGNK--CPLCRTVI 237
>At1g18660.1 68414.m02327 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 486
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 195 ECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
+C +CL + + CGH FC CL Q ++ R ++ CP+C+ I
Sbjct: 195 DCTVCLKLLYEPATTPCGHTFCRSCLFQSMD-RGNK--CPLCRTVI 237
>At5g54990.1 68418.m06848 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 226
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +3
Query: 192 LECNICLDTARDAVVSM---CGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPLY 359
L+C ICL V M C H+F C+ WL+ PS CP+C+ + K + +Y
Sbjct: 172 LDCPICLTELSSGVSRMKLPCSHVFHRDCIMTWLKKNPS---CPICRTK-AHGKTVSIY 226
>At3g13430.1 68416.m01688 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 315
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +3
Query: 174 KHDERMLECNICLDT---ARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCK 323
K ++ +L+C++CLD +A C H F CL WLE S CPVC+
Sbjct: 217 KIEDSLLQCSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSS---CPVCR 266
>At1g55530.1 68414.m06353 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 351
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +3
Query: 183 ERMLECNICLDT---ARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCK 323
E L+C++CLD +A + C H F CL WLE S CPVC+
Sbjct: 218 EETLQCSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLELHSS---CPVCR 264
>At5g46650.1 68418.m05748 zinc finger (C3HC4-type RING finger)
family protein contains similarity to RING-H2 zinc
finger protein ATL6 [Arabidopsis thaliana] GI:4928403;
contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 289
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Frame = +3
Query: 174 KHDERMLECNICLDTARDA-----VVSMCGHLFCWPCLHQWLETRPSRQVCPVCK 323
+ D+ LEC ICL + +++ C H+F C+ QWLE S + CPVC+
Sbjct: 106 REDKYGLECAICLLEFEEEHILLRLLTTCYHVFHQECIDQWLE---SNKTCPVCR 157
>At1g04020.2 68414.m00389 zinc finger (C3HC4-type RING finger)
family protein / BRCT domain-containing protein contains
Pfam domain, PF00533: BRCA1 C Terminus (BRCT) domain
Length = 713
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +3
Query: 183 ERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKA 326
E L+C +CL V+ C H+FC C+H+ + CPVCK+
Sbjct: 20 ELELKCPLCLKLLNRPVLLPCDHVFCDSCVHKSSQVESG---CPVCKS 64
>At1g04020.1 68414.m00388 zinc finger (C3HC4-type RING finger)
family protein / BRCT domain-containing protein contains
Pfam domain, PF00533: BRCA1 C Terminus (BRCT) domain
Length = 714
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +3
Query: 183 ERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKA 326
E L+C +CL V+ C H+FC C+H+ + CPVCK+
Sbjct: 20 ELELKCPLCLKLLNRPVLLPCDHVFCDSCVHKSSQVESG---CPVCKS 64
>At3g05250.1 68416.m00573 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 278
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 8/50 (16%)
Frame = +3
Query: 198 CNICLDT-ARDAVVSMCGHLFCWPCLHQWLE---TRPSRQ----VCPVCK 323
C ICL R++ + C H FC+ C+ QW++ ++ S+Q CP+CK
Sbjct: 22 CPICLGQFLRESYLDTCFHKFCFNCIKQWIKVVSSKASKQRSSVTCPLCK 71
>At3g05200.1 68416.m00567 zinc finger (C3HC4-type RING finger)
family protein (ATL6) contains Pfam profile: PF00097:
Zinc finger, C3HC4 type (RING finger)
Length = 398
Score = 37.9 bits (84), Expect = 0.008
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +3
Query: 192 LECNICLDTARD----AVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISRE 341
LEC ICL+ D ++ C H+F C+ WLE + CPVC+A ++ +
Sbjct: 126 LECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLE---AHVTCPVCRANLAEQ 176
>At2g44580.1 68415.m05548 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 624
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +3
Query: 198 CNICLDTARDAV----VSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
C ICL+ A + ++ C H F C+ WLE + +CP+C+A I
Sbjct: 549 CTICLENATEGEKMRRIAACSHCFHVDCIDPWLE---KKSMCPLCRAEI 594
Score = 34.3 bits (75), Expect = 0.10
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +3
Query: 198 CNICLDTARDAV----VSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
C ICL+ A + ++ C H F C+ WL + CP+C+A I
Sbjct: 398 CTICLEDAAEGEKMRRITACSHCFHVDCIDPWL---MKKSTCPLCRAEI 443
>At1g73760.1 68414.m08540 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 367
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +3
Query: 195 ECNICLDT--ARDAVVSM-CGHLFCWPCLHQWLETRPSRQVCPVCK 323
+C IC D A+D V + CGH F C++QWL + S CPVCK
Sbjct: 318 KCIICQDEYEAKDEVGELRCGHRFHIDCVNQWLVRKNS---CPVCK 360
>At1g47570.1 68414.m05281 zinc finger (C3HC4-type RING finger)
family protein contains Pfam PF00097: Zinc finger, C3HC4
type (RING finger)
Length = 466
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = +3
Query: 180 DERMLECNICLDTARDAVVSM-CGHLFCWPCLHQWL---ETRPSRQVCPVCKAAI 332
D +C+ICL+ D V + C H FC C +W+ E + +CP C+ +
Sbjct: 132 DPEHAKCSICLNIWHDVVTAAPCLHNFCNGCFSEWMRRSEEKHKHVLCPQCRTTV 186
>At5g53910.1 68418.m06708 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative contains Pfam
profile: PF00097 zinc finger, C3HC4 type (RING finger)
Length = 230
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +3
Query: 195 ECNICLD---TARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISRE 341
+C IC T R+ +CGH F C+ +W + R + CP+C+ + RE
Sbjct: 171 KCAICFQEFKTGREVATLLCGHEFDNKCIMEWFKVRYN---CPLCRFELPRE 219
>At5g48655.3 68418.m06019 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 203
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 180 DERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQ-VCPVCKAAISREKVIPL 356
+E C IC+ + + + CGH+FC C+ + SRQ CP C+ ++ +++I +
Sbjct: 142 EEPKFTCPICMCPFTEEMSTKCGHIFCKGCIKMAI----SRQGKCPTCRKKVTAKELIRV 197
Query: 357 Y 359
+
Sbjct: 198 F 198
>At5g48655.2 68418.m06018 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 203
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 180 DERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQ-VCPVCKAAISREKVIPL 356
+E C IC+ + + + CGH+FC C+ + SRQ CP C+ ++ +++I +
Sbjct: 142 EEPKFTCPICMCPFTEEMSTKCGHIFCKGCIKMAI----SRQGKCPTCRKKVTAKELIRV 197
Query: 357 Y 359
+
Sbjct: 198 F 198
>At5g48655.1 68418.m06017 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 203
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 180 DERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQ-VCPVCKAAISREKVIPL 356
+E C IC+ + + + CGH+FC C+ + SRQ CP C+ ++ +++I +
Sbjct: 142 EEPKFTCPICMCPFTEEMSTKCGHIFCKGCIKMAI----SRQGKCPTCRKKVTAKELIRV 197
Query: 357 Y 359
+
Sbjct: 198 F 198
>At5g01450.1 68418.m00058 expressed protein
Length = 444
Score = 37.5 bits (83), Expect = 0.011
Identities = 19/58 (32%), Positives = 22/58 (37%)
Frame = +3
Query: 177 HDERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVI 350
H C IC D RD CGH C C + CPVC+ I + K I
Sbjct: 386 HSSTRYLCAICYDAPRDCFFLSCGH--CVACFQCGTRIAETSGFCPVCRKKIRKVKKI 441
>At3g24800.1 68416.m03112 PRT1 protein (PRT1) E3, N-end rule
ubiquitin ligase, contains two RING finger domain;
identical to PRT1 [Arabidopsis thaliana] GI:3319884
Length = 410
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 198 CNICLDTARDAVVSMCGHLFCWPCLHQWLE-TRPSRQVCPVCK 323
C +CL+ +V CGHL C+ C+H+ + R S CP+C+
Sbjct: 26 CCVCLELLYKPIVLSCGHLSCFWCVHKSMNGFRESH--CPICR 66
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 192 LECNICLDTARDAVVSMCGHLFCWPCLHQWLE--TRPSRQVCPVC 320
L C+ C + VV CGH++C C+ E + Q C VC
Sbjct: 190 LLCSACKELLVRPVVLNCGHVYCEGCVVDMAEESEKIKCQECNVC 234
>At2g17450.1 68415.m02014 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 185
Score = 37.5 bits (83), Expect = 0.011
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +3
Query: 195 ECNICLDTARDA----VVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAIS 335
EC ICL D V+ +CGH F C+ +WL +R S CP C+ ++
Sbjct: 101 ECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSS---CPSCRRILT 148
>At5g44690.1 68418.m05476 hypothetical protein
Length = 684
Score = 37.1 bits (82), Expect = 0.014
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 198 CNICLDTARDAVVSMCGHL-FCWPCLHQWLETRPSRQVCPVCKAAI 332
C+IC + D+++ CGH+ C C H E + S CP+C A I
Sbjct: 632 CSICFEMPIDSLLYRCGHMCTCLKCAH---ELQWSNMKCPICMAPI 674
>At4g09130.1 68417.m01507 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 357
Score = 37.1 bits (82), Expect = 0.014
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Frame = +3
Query: 192 LECNICLDTARDAV----VSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAIS 335
+EC ICL D + C H F C+ +WL SR CPVC+A +S
Sbjct: 118 VECAICLCEFEDEEPLRWMPPCSHTFHANCIDEWLS---SRSTCPVCRANLS 166
>At3g48030.1 68416.m05236 hypoxia-responsive family protein / zinc
finger (C3HC4-type RING finger) family protein similar
to RING-H2 finger protein RHX1a [Arabidopsis thaliana]
GI:3790591; contains Pfam profiles PF00097: Zinc finger
C3HC4 type (RING finger), PF04588: Hypoxia induced
protein conserved region
Length = 349
Score = 37.1 bits (82), Expect = 0.014
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +3
Query: 183 ERMLECNICL----DTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKV 347
E+ +C +CL DT + ++ +C H F C+ WL S CP+C+ ++S V
Sbjct: 202 EQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWL---LSNSTCPLCRRSLSTSNV 257
>At3g47160.1 68416.m05120 expressed protein similar to MTD2
[Medicago truncatula] GI:9294812; supporting cDNA
gi|25083983|gb|BT002136.1|
Length = 245
Score = 37.1 bits (82), Expect = 0.014
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +3
Query: 183 ERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISR 338
ER EC IC++ V+ C H C C W + CP C+ ++ R
Sbjct: 142 EREEECGICMEMNNMVVLPNCTHSLCIKCYRDW---HGRSESCPFCRDSLKR 190
>At3g10910.1 68416.m01313 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 181
Score = 37.1 bits (82), Expect = 0.014
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +3
Query: 180 DERMLECNICLDTARDA----VVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKV 347
D + EC ICL D V+ C H F C+ WL +R S CP C+ ++ E+
Sbjct: 108 DMKATECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSS---CPTCRQSLLLEQP 164
Query: 348 IPL 356
P+
Sbjct: 165 SPM 167
>At1g67180.1 68414.m07642 zinc finger (C3HC4-type RING finger)
family protein / BRCT domain-containing protein contains
Pfam domains PF00533: BRCA1 C Terminus (BRCT) domain and
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 453
Score = 37.1 bits (82), Expect = 0.014
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +3
Query: 192 LECNIC-LDTARDAVVSMCGHLFCWPCLHQW---LETRPSRQVCPVCKA 326
+ C IC + + + CGH FC+ C+ +W L + + CP+CK+
Sbjct: 298 VSCIICWTEFSSSRGILPCGHRFCYSCIQKWADRLVSERKKTTCPLCKS 346
>At1g35330.1 68414.m04379 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 327
Score = 37.1 bits (82), Expect = 0.014
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Frame = +3
Query: 192 LECNICLDTARDA----VVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
+EC ICL+ D ++ C H F C+ WL +R + CPVC+A++
Sbjct: 126 VECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRST---CPVCRASL 173
>At5g02750.1 68418.m00217 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 283
Score = 36.7 bits (81), Expect = 0.019
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = +3
Query: 192 LECNIC---LDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKV 347
+EC IC + RD C H F W C+ WL + CP C+ + + V
Sbjct: 212 VECVICKEEMSEGRDVCEMPCQHFFHWKCILPWLS---KKNTCPFCRFQLPTDDV 263
>At3g14320.1 68416.m01811 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 204
Score = 36.7 bits (81), Expect = 0.019
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +3
Query: 189 MLECNICLDTARDA----VVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
+LEC +CL D V+ C H F C+ WL+ S CP+C+ +
Sbjct: 85 VLECVVCLSELADGDKARVLPSCDHWFHVECIDSWLQ---SNSTCPICRKRV 133
>At3g03550.1 68416.m00357 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger domain, C3HC4 type
(RING finger) 152633.
Length = 356
Score = 36.7 bits (81), Expect = 0.019
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Frame = +3
Query: 195 ECNICLDTARD----AVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPLYG 362
+C++CL ++ ++ C H F PC+ WL+ S CP+C+A I + +
Sbjct: 158 DCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLK---SHSNCPLCRAFIVTSSAVEIVD 214
Query: 363 RGNTKQEDPRNKV 401
N + N +
Sbjct: 215 LTNQQIVTENNSI 227
>At2g47560.1 68415.m05935 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 227
Score = 36.7 bits (81), Expect = 0.019
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +3
Query: 183 ERMLECNICLDTARDA----VVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
E EC++CL + ++ CGH F C+ W SR CP+C+A +
Sbjct: 103 EEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFR---SRSTCPLCRAPV 153
>At1g17970.1 68414.m02223 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 368
Score = 36.7 bits (81), Expect = 0.019
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +3
Query: 195 ECNICLDT--ARDAVVSM-CGHLFCWPCLHQWLETRPSRQVCPVCKAA 329
+C+IC D D V + CGH F C+ QWL + CPVCK A
Sbjct: 319 KCSICQDEYEREDEVGELNCGHSFHVHCVKQWLS---RKNACPVCKKA 363
>At4g26400.2 68417.m03800 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 356
Score = 36.3 bits (80), Expect = 0.025
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Frame = +3
Query: 192 LECNICLDT---ARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI---SREKVIP 353
L+C+ICLD +A C H F C+ WLE S CPVC+ + KV P
Sbjct: 239 LQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSS---CPVCRYELPPDDETKVNP 295
Query: 354 LYGRGNTKQEDPRNK 398
+ R T + + N+
Sbjct: 296 VRPRTRTLEINVSNE 310
>At4g26400.1 68417.m03799 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 356
Score = 36.3 bits (80), Expect = 0.025
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Frame = +3
Query: 192 LECNICLDT---ARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI---SREKVIP 353
L+C+ICLD +A C H F C+ WLE S CPVC+ + KV P
Sbjct: 239 LQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSS---CPVCRYELPPDDETKVNP 295
Query: 354 LYGRGNTKQEDPRNK 398
+ R T + + N+
Sbjct: 296 VRPRTRTLEINVSNE 310
>At2g38185.4 68415.m04692 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 872
Score = 36.3 bits (80), Expect = 0.025
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +3
Query: 198 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVI 350
C IC D RD CGH C C + + ++ CP+C+ I K I
Sbjct: 821 CAICFDAPRDCCFLPCGH--CVSCYQCGTKIKRTKGRCPICRKKIMHVKRI 869
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 198 CNICLDTARDAVVSMCGH-LFCWPCLHQWLETRPSRQVCPVCKAAISREKVI 350
C IC D RD CGH + C+ C E S CP+C+ + + K I
Sbjct: 391 CAICFDVPRDCFFLPCGHSVSCYECGTTMQEADGS---CPICRRKMKKVKRI 439
>At2g37580.1 68415.m04610 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 235
Score = 36.3 bits (80), Expect = 0.025
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +3
Query: 195 ECNICLDTARDA----VVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAIS 335
EC++CL D+ +S C H F C+ WL+ P+ CP+C+ +S
Sbjct: 141 ECSVCLMVFTDSDELRQLSECKHAFHVLCIETWLKDHPN---CPICRTDVS 188
>At2g30580.1 68415.m03726 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 420
Score = 36.3 bits (80), Expect = 0.025
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +3
Query: 192 LECNICLDTARDAV-VSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPLYGRG 368
+ C +C RDA +S C H FC C+++ + T + CPVC + + L R
Sbjct: 18 MTCPLCDKLLRDATTISECLHTFCRKCIYEKI-TEDEIESCPVCDIDLGGTPLEKL--RP 74
Query: 369 NTKQEDPRNKVPPRPAGQRTEPESTS 446
+ +D R K+ P + PE S
Sbjct: 75 DHILQDLRAKLFPLKRKKERAPEVVS 100
>At4g24015.1 68417.m03451 zinc finger (RING-H2 type) protein-related
low similarity to RING-H2 zinc finger protein ATL4
[Arabidopsis thaliana] GI:4928399
Length = 174
Score = 35.9 bits (79), Expect = 0.033
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = +3
Query: 198 CNICLDT--ARDAVVSM--CGHLFCWPCLHQWLETRPSRQVCPVCKAAIS 335
C +CL ++ +V M C H+F C+H WL S CP+C++++S
Sbjct: 105 CCVCLGEFELKEELVEMPLCKHIFHLDCIHLWLY---SHNTCPLCRSSVS 151
>At4g13100.2 68417.m02042 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 265
Score = 35.9 bits (79), Expect = 0.033
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 192 LECNICLDTARDAVVSMCGHLFCWPCLHQ-WLETRPSRQVCPVCKAAI 332
L C +C+ ++ A CGH FC C + W++ R CP+C AI
Sbjct: 215 LGCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQ----RGNCPLCNTAI 258
>At4g13100.1 68417.m02041 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 304
Score = 35.9 bits (79), Expect = 0.033
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 192 LECNICLDTARDAVVSMCGHLFCWPCLHQ-WLETRPSRQVCPVCKAAI 332
L C +C+ ++ A CGH FC C + W++ R CP+C AI
Sbjct: 254 LGCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQ----RGNCPLCNTAI 297
>At3g53410.1 68416.m05894 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 299
Score = 35.9 bits (79), Expect = 0.033
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 180 DERMLECNICLDTARDAVVSMCGHL-FCWPCLHQWLETRPSRQVCPVCKAAISR 338
+ER EC ICL RD V C H+ C C R +CP+C+ + R
Sbjct: 237 NERGKECVICLSEPRDTTVLPCRHMCMCSGCAKL---LRFQTNLCPICRQPVDR 287
>At3g19950.1 68416.m02525 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 328
Score = 35.9 bits (79), Expect = 0.033
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +3
Query: 189 MLECNICLDTARDA--VVSM-CGHLFCWPCLHQWLETRPSRQVCPVCK 323
M +C +C+D D V M C H+F CL WLE S CPVC+
Sbjct: 213 MNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNS---CPVCR 257
>At3g09770.1 68416.m01157 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 388
Score = 35.9 bits (79), Expect = 0.033
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +3
Query: 195 ECNICLDTARDAVVSMCGHL-FCWPCLHQWLETRPSRQVCPVCKAAISREKVIPLYGRGN 371
EC ICL RD V C H+ C C + L + +R CP+C+ + R I ++G
Sbjct: 318 ECVICLSEPRDTTVLPCRHMCMCSGCA-KVLRFQTNR--CPICRQPVERLLEIKVHGNNG 374
Query: 372 T 374
+
Sbjct: 375 S 375
>At1g72200.1 68414.m08348 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 404
Score = 35.9 bits (79), Expect = 0.033
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +3
Query: 192 LECNICLDTARD----AVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKA 326
LEC++CL+ D ++ C H+F C+ WL S CP+C+A
Sbjct: 142 LECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLR---SHTTCPLCRA 187
>At5g17600.1 68418.m02064 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 362
Score = 35.5 bits (78), Expect = 0.044
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +3
Query: 195 ECNICLDTARD----AVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAIS 335
+C++CL + ++ C H F PC+ WL+ S CP+C+A ++
Sbjct: 141 DCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLK---SHSNCPLCRAFVT 188
>At4g01020.1 68417.m00137 helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
similar to SP|Q14562 ATP-dependent helicase DDX8 (RNA
helicase HRH1) (DEAH-box protein 8) {Homo sapiens};
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger),
PF01485: IBR domain
Length = 1787
Score = 35.5 bits (78), Expect = 0.044
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 174 KHDERMLECNICLDTARDAV-VSMCGHLFCWPCLHQWLE 287
K DE LEC ICL D + C HLFC CL + E
Sbjct: 1553 KPDEIELECPICLSEVDDGYSLEGCSHLFCKACLLEQFE 1591
>At3g28620.1 68416.m03572 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHA2b [Arabidopsis thaliana] GI:3790571; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 211
Score = 35.5 bits (78), Expect = 0.044
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +3
Query: 174 KHDERMLECNICLDT---ARD-AVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISR 338
+ +E C ICL+ + D + C H F PCL +WL TR + CP+C+ + +
Sbjct: 152 EEEEESKTCAICLENLLRSEDYCEMPTCSHYFHEPCLTEWL-TRDNNS-CPLCRKPVDK 208
>At3g27330.1 68416.m03418 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles: PF00097 zinc
finger, C3HC4 type (RING finger), PF01697 Domain of
unknown function
Length = 913
Score = 35.5 bits (78), Expect = 0.044
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +3
Query: 192 LECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
L C ICL+ + + CGH FC CL + + R+ CP C+ I
Sbjct: 722 LSCAICLEICFEPSTTTCGHSFCKKCLRSAAD-KCGRK-CPKCRQLI 766
>At3g19910.1 68416.m02521 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 340
Score = 35.5 bits (78), Expect = 0.044
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +3
Query: 180 DERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAIS 335
+E + C + + D ++ C H + C++ WL+ +VCPVC A +S
Sbjct: 285 NESCVICRLDYEDDEDLILLPCKHSYHSECINNWLKI---NKVCPVCSAEVS 333
>At3g11110.1 68416.m01345 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger)
Length = 158
Score = 35.5 bits (78), Expect = 0.044
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = +3
Query: 180 DERMLECNICLDTARDA----VVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
+E EC ICL + V+ C H + C+ +WL+T S CP+C+ +I
Sbjct: 101 EEEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESS---CPLCRVSI 152
>At1g22500.1 68414.m02811 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 381
Score = 35.5 bits (78), Expect = 0.044
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +3
Query: 192 LECNICLDTARD----AVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKA 326
LEC +CL+ D ++ C H+F C+ WL S+ CP+C+A
Sbjct: 116 LECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLR---SQTTCPLCRA 161
>At5g58580.1 68418.m07341 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 308
Score = 35.1 bits (77), Expect = 0.058
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Frame = +3
Query: 195 ECNICLDT--ARD--AVVSMCGHLFCWPCLHQWLETRPSRQVCPVCK----AAISREKVI 350
EC ICL A D + CGH F C+ WL S CP+C+ AA+S E+ +
Sbjct: 137 ECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLS---SHSTCPLCRSPVLAAVSDEENL 193
Query: 351 PLYGRGNTKQEDPRNKVPPRPAGQ 422
L N +E+ ++ PAG+
Sbjct: 194 KL--AVNAVEEEAEVRLQMSPAGE 215
>At3g13228.1 68416.m01663 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 325
Score = 35.1 bits (77), Expect = 0.058
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +3
Query: 198 CNICLD--TARDAVVSM-CGHLFCWPCLHQWLETRPSRQVCPVCKAAISREK 344
C ICL+ A +V++ CGH F C +W ET CP+C+ + RE+
Sbjct: 275 CTICLEEFNAGGILVALPCGHDFDDECAVKWFET---NHFCPLCRYELPREE 323
>At2g29840.1 68415.m03624 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 310
Score = 35.1 bits (77), Expect = 0.058
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = +3
Query: 198 CNICL---DTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCK 323
C+ICL D R V CGH F C +W ET CP+C+
Sbjct: 261 CSICLEEFDDGRSIVALPCGHEFDDECALKWFETNHD---CPLCR 302
>At1g76410.1 68414.m08881 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 185
Score = 35.1 bits (77), Expect = 0.058
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +3
Query: 183 ERMLECNICLD--TARDA--VVSMCGHLFCWPCLHQWLETRPSRQVCPVCK 323
E+++EC ICL A D V+ CGH F C+ WL + S CP C+
Sbjct: 99 EKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSS---CPSCR 146
>At5g56340.1 68418.m07032 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 396
Score = 34.7 bits (76), Expect = 0.077
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +3
Query: 192 LECNICLDT---ARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCK 323
L+C++CLD +A C H F C+ WLE S CPVC+
Sbjct: 257 LQCSVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLELHSS---CPVCR 300
>At5g27420.1 68418.m03273 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 zinc finger protein
ATL6 [Arabidopsis thaliana]
gi|4928403|gb|AAD33584.1|AF132016_1[4928403]; contains
Pfam domain, PF00097: Zinc finger, C3HC4 type (RING
finger)
Length = 368
Score = 34.7 bits (76), Expect = 0.077
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +3
Query: 192 LECNICLDTARD----AVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIP 353
LEC ICL+ D ++ C H+F C+ WL+ CPVC+ ++ + P
Sbjct: 122 LECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQ---GHVTCPVCRTNLAEQTPEP 176
>At4g37890.2 68417.m05359 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles PF00097: Zinc
finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 711
Score = 34.7 bits (76), Expect = 0.077
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = +3
Query: 195 ECNICLDTARDA-----VVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPL 356
+C ICL +A+ + C H F +PC+ R CPVC A+ ++PL
Sbjct: 140 KCGICLQSAKAGRGTAIFTAECSHTFHFPCVASRAGDRNLLSDCPVCGASWRETSLLPL 198
>At4g37890.1 68417.m05358 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles PF00097: Zinc
finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 739
Score = 34.7 bits (76), Expect = 0.077
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = +3
Query: 195 ECNICLDTARDA-----VVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPL 356
+C ICL +A+ + C H F +PC+ R CPVC A+ ++PL
Sbjct: 168 KCGICLQSAKAGRGTAIFTAECSHTFHFPCVASRAGDRNLLSDCPVCGASWRETSLLPL 226
>At3g06140.1 68416.m00705 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger)
Length = 359
Score = 34.7 bits (76), Expect = 0.077
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 195 ECNICLDTARDAVVSMCGHL-FCWPCLHQWLETRPSRQVCPVCKAAI 332
EC IC+ A+D V C HL C C E R CP+C+ I
Sbjct: 301 ECVICMTEAKDTAVLPCRHLCMCSDCAK---ELRLQSNKCPICRQPI 344
>At3g05670.1 68416.m00631 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 883
Score = 34.7 bits (76), Expect = 0.077
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = +3
Query: 198 CNICL---DTAR-DAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCK 323
C ICL D R + C H FC+ C+ +W + SR CP+CK
Sbjct: 413 CGICLSEEDMRRLKGTLDCCSHYFCFTCIMEWSKVE-SR--CPLCK 455
>At2g37150.2 68415.m04558 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 546
Score = 34.7 bits (76), Expect = 0.077
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = +3
Query: 183 ERMLECNICLDTARD----AVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKA 326
E +C ICL+ ++ V CGH + C+ +WL + S CP+CK+
Sbjct: 487 EEQRKCAICLEEYKEKEELGEVKGCGHDYHGRCIKKWLSMKNS---CPICKS 535
>At2g37150.1 68415.m04557 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 546
Score = 34.7 bits (76), Expect = 0.077
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = +3
Query: 183 ERMLECNICLDTARD----AVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKA 326
E +C ICL+ ++ V CGH + C+ +WL + S CP+CK+
Sbjct: 487 EEQRKCAICLEEYKEKEELGEVKGCGHDYHGRCIKKWLSMKNS---CPICKS 535
>At2g34000.1 68415.m04163 zinc finger protein-related contains weak
hit to Pfam profile: PF00097 zinc finger, C3HC4 type
(RING finger)
Length = 151
Score = 34.7 bits (76), Expect = 0.077
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 192 LECNICLDTA-RDAVVSM---CGHLFCWPCLHQWLETRPSRQVCPVCK 323
+EC +CL ++ V+ + C H+F C+ +WLE S CPVC+
Sbjct: 89 IECPVCLGLIPKNVVIKVLPNCMHMFDEECIGKWLE---SHATCPVCR 133
>At2g04240.2 68415.m00413 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 162
Score = 34.7 bits (76), Expect = 0.077
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = +3
Query: 195 ECNICLDTAR-DAVVSM--CGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
EC++CL + D+ ++ CGHLF CL +W++ CP+C+ +
Sbjct: 102 ECSVCLSKFQGDSEINKLKCGHLFHKTCLEKWIDY--WNITCPLCRTPL 148
>At2g04240.1 68415.m00412 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 162
Score = 34.7 bits (76), Expect = 0.077
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = +3
Query: 195 ECNICLDTAR-DAVVSM--CGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
EC++CL + D+ ++ CGHLF CL +W++ CP+C+ +
Sbjct: 102 ECSVCLSKFQGDSEINKLKCGHLFHKTCLEKWIDY--WNITCPLCRTPL 148
>At1g04360.1 68414.m00426 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 381
Score = 34.7 bits (76), Expect = 0.077
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Frame = +3
Query: 195 ECNICLDTARD----AVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISRE 341
EC++CL+ ++ ++ C H+F C+ WL+ + CP+C+ ++S E
Sbjct: 133 ECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNAN---CPLCRTSVSCE 182
>At5g66070.1 68418.m08324 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 221
Score = 34.3 bits (75), Expect = 0.10
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = +3
Query: 189 MLECNICLDTAR--DAVVSM--CGHLFCWPCLHQWLETRPSRQVCPVCK 323
++ C++CL + + V S+ C H+F PC+ +WL S CP+C+
Sbjct: 173 IVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHAS---CPLCR 218
>At5g43200.1 68418.m05278 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHY1a [Arabidopsis thaliana] GI:3790593; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 207
Score = 34.3 bits (75), Expect = 0.10
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +3
Query: 180 DERMLECNICLD---TARD-AVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISRE 341
+E C ICL+ T+ D + C H F PCL QWL CP+C+ + ++
Sbjct: 150 EEESKTCAICLEELSTSDDYCELPNCTHCFHEPCLTQWLIR--GNNSCPLCRKPVDKQ 205
>At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 34.3 bits (75), Expect = 0.10
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +3
Query: 198 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
C ICL +D CGH C C P Q+CP+C+A I
Sbjct: 425 CPICLSNPKDMAFG-CGHQTCCEC-------GPDLQMCPICRAPI 461
>At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 34.3 bits (75), Expect = 0.10
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +3
Query: 198 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
C ICL +D CGH C C P Q+CP+C+A I
Sbjct: 425 CPICLSNPKDMAFG-CGHQTCCEC-------GPDLQMCPICRAPI 461
>At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 34.3 bits (75), Expect = 0.10
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +3
Query: 198 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
C ICL +D CGH C C P Q+CP+C+A I
Sbjct: 425 CPICLSNPKDMAFG-CGHQTCCEC-------GPDLQMCPICRAPI 461
>At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 34.3 bits (75), Expect = 0.10
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +3
Query: 198 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
C ICL +D CGH C C P Q+CP+C+A I
Sbjct: 425 CPICLSNPKDMAFG-CGHQTCCEC-------GPDLQMCPICRAPI 461
>At5g10650.1 68418.m01233 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 525
Score = 34.3 bits (75), Expect = 0.10
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +3
Query: 192 LECNICLDTARDAV---VSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVI 350
++C+IC + D C H++ C+ QWL + CP+CK + EK I
Sbjct: 473 IKCSICQEEYVDGDELGTIPCQHMYHVSCVQQWLR---MKNWCPICKTSAEEEKSI 525
>At5g10370.1 68418.m01203 helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
similar to RNA-dependent ATPase/helicase Cdc28p
[Schizosaccharomyces pombe] GI:1439562; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain, weak hit
to PF00097: Zinc finger, C3HC4 type (RING finger),
PF01485: IBR domain
Length = 1775
Score = 34.3 bits (75), Expect = 0.10
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 174 KHDERMLECNICLDTARDAV-VSMCGHLFCWPCLHQWLE 287
K DE +EC ICL D + C HLFC CL + E
Sbjct: 1556 KPDEIEVECPICLSEVDDGYSLEGCSHLFCKACLLEQFE 1594
>At4g22250.1 68417.m03219 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 214
Score = 34.3 bits (75), Expect = 0.10
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +3
Query: 198 CNICLDTARDAVVSMCGHLFCWPCLHQ-WLETRPSRQVCPVCKAAI 332
C +C+ + A CGH FC C + WL +R CP+C I
Sbjct: 166 CCVCMGRKKGAAFIPCGHTFCRVCSRELWL----NRGSCPLCNRPI 207
>At4g09100.1 68417.m01501 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 132
Score = 34.3 bits (75), Expect = 0.10
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +3
Query: 192 LECNICLDTARD----AVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
LEC +CL+ +D +V C H+F C+ WL CP+C+A +
Sbjct: 83 LECVVCLNEFKDDETLRLVPPCVHVFHADCVDIWLS---HSSTCPICRAKV 130
>At3g25030.1 68416.m03128 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 250
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 192 LECNICLDTARDAVVSMCGHLFCWPCLHQ-WLETRPSRQVCPVCKAAI 332
+ C +C+ ++ A CGH FC C + W++ R CP+C I
Sbjct: 200 ISCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQ----RGNCPLCNTTI 243
>At3g18930.2 68416.m02403 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger)
Length = 411
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +3
Query: 195 ECNICLDTARDA----VVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
+C +CL + + +C H F C+ +WL + P+ CP+C+ AI
Sbjct: 155 DCAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPN---CPLCRTAI 201
>At3g18930.1 68416.m02402 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger)
Length = 411
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +3
Query: 195 ECNICLDTARDA----VVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
+C +CL + + +C H F C+ +WL + P+ CP+C+ AI
Sbjct: 155 DCAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPN---CPLCRTAI 201
>At2g38185.3 68415.m04691 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 346
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 198 CNICLDTARDAVVSMCGH-LFCWPCLHQWLETRPSRQVCPVCKAAISREKVI 350
C IC D RD CGH + C+ C E S CP+C+ + + K I
Sbjct: 295 CAICFDVPRDCFFLPCGHSVSCYECGTTMQEADGS---CPICRRKMKKVKRI 343
>At2g38185.2 68415.m04690 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 441
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 198 CNICLDTARDAVVSMCGH-LFCWPCLHQWLETRPSRQVCPVCKAAISREKVI 350
C IC D RD CGH + C+ C E S CP+C+ + + K I
Sbjct: 390 CAICFDVPRDCFFLPCGHSVSCYECGTTMQEADGS---CPICRRKMKKVKRI 438
>At2g38185.1 68415.m04689 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 441
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 198 CNICLDTARDAVVSMCGH-LFCWPCLHQWLETRPSRQVCPVCKAAISREKVI 350
C IC D RD CGH + C+ C E S CP+C+ + + K I
Sbjct: 390 CAICFDVPRDCFFLPCGHSVSCYECGTTMQEADGS---CPICRRKMKKVKRI 438
>At1g53190.1 68414.m06028 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 finger protein RHG1a
GI:3822225 from [Arabidopsis thaliana]; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 494
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Frame = +3
Query: 198 CNICLDTAR--DAVVSM-CGHLFCWPCLHQWLETRPSRQVCPVCKA-AISREK 344
C IC ++ + + + ++ CGH + CL +WL + VCP+CK+ A+ EK
Sbjct: 442 CTICQESFKNEEKIATLDCGHEYHAECLEKWLIV---KNVCPICKSEALVMEK 491
>At1g18780.1 68414.m02341 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 325
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +3
Query: 198 CNICL---DTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREK 344
C ICL D R V CGH F C+ +W VCP+C+ + E+
Sbjct: 277 CTICLEEFDDGRSIVTLPCGHEFDEECVLEWF---VRSHVCPLCRLELPCER 325
>At5g51450.1 68418.m06378 zinc finger (C3HC4-type RING finger)
family protein contains similarity to autocrine motility
factor receptor [Mus musculus] GI:5931953; contains Pfam
profiles PF00097: Zinc finger, C3HC4 type (RING finger),
PF02845: CUE domain
Length = 577
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +3
Query: 195 ECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSR-QVCPVCK 323
EC IC + A C HLF CL WL+ + CP C+
Sbjct: 336 ECAICREPMAKAKRLHCNHLFHLGCLRSWLDQGLNEVYSCPTCR 379
>At5g37270.1 68418.m04477 zinc finger (C3HC4-type RING finger)
family protein ow similarity to RING-H2 finger protein
RHA3b [gi:3790575], RHA1a [gi:3790554]; contains Pfam
domain zinc finger, C3HC4 type (RING finger) PF00097
Length = 208
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Frame = +3
Query: 180 DERMLECNICLD----TARDAVVSM--CGHLFCWPCLHQWLETRPSRQVCPVCK 323
DE C+ICL+ + D ++ + C HLF C+ +WL+ + S CP+C+
Sbjct: 147 DEEETTCSICLEDFSESHDDNIILLPDCFHLFHQSCIFEWLKRQRS---CPLCR 197
>At5g19080.1 68418.m02268 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 378
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +3
Query: 195 ECNICLDTARDAVVSMCGHL-FCWPCLHQWLETRPSRQVCPVCKAAI 332
EC ICL +D V C HL C C E R CP+C+ I
Sbjct: 320 ECVICLTEPKDTAVMPCRHLCLCSDCAE---ELRFQTNKCPICRQPI 363
>At4g25230.2 68417.m03631 zinc finger (C3HC4-type RING finger)
family protein similar to autocrine motility factor
receptor [Mus musculus] GI:5931953; contains Pfam
profiles PF00097: Zinc finger, C3HC4 type (RING finger),
PF02845: CUE domain
Length = 578
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +3
Query: 195 ECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSR-QVCPVCK 323
EC IC + A C HLF CL WL+ + CP C+
Sbjct: 336 ECAICREPMAKAKRLHCNHLFHLGCLRSWLDQGLNEVYSCPTCR 379
>At4g25230.1 68417.m03630 zinc finger (C3HC4-type RING finger)
family protein similar to autocrine motility factor
receptor [Mus musculus] GI:5931953; contains Pfam
profiles PF00097: Zinc finger, C3HC4 type (RING finger),
PF02845: CUE domain
Length = 578
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +3
Query: 195 ECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSR-QVCPVCK 323
EC IC + A C HLF CL WL+ + CP C+
Sbjct: 336 ECAICREPMAKAKRLHCNHLFHLGCLRSWLDQGLNEVYSCPTCR 379
>At4g05350.1 68417.m00817 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHG1a [Arabidopsis thaliana] GI:3822225; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 206
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Frame = +3
Query: 198 CNICLDTA------RDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
C+ICL++ RD C H+F CL +WL+ + CP+C+ I
Sbjct: 157 CSICLESLVSGPKPRDVTRMTCSHVFHNGCLLEWLK---RKNTCPLCRTEI 204
>At3g43180.1 68416.m04557 zinc finger (C3HC4-type RING finger)
family protein contains Zinc finger, C3HC4 type (RING
finger) signature, PROSITE:PS00518
Length = 191
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = +3
Query: 198 CNICLDTARDAV----VSMCGHLFCWPCLHQWLETRPSRQVCPVC 320
C IC D A V++CGH FC C+ Q +E+R P C
Sbjct: 59 CRICFDEDVKAEQMYSVALCGHQFCVDCVKQHIESRLLEGCVPRC 103
>At1g62370.1 68414.m07037 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 204
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 198 CNICLDTARDAVVSMCGHLFCWPCLHQ-WLETRPSRQVCPVCKAAI 332
C +C+ + A CGH +C C + W+ +R CP+C +I
Sbjct: 156 CCVCMGREKGAAFIPCGHTYCRVCSREIWM----NRGTCPLCNRSI 197
>At1g57820.2 68414.m06561 zinc finger (C3HC4-type RING finger)
family protein low similarity to nuclear protein np95
[Mus musculus] GI:4220590; contains Pfam profiles
PF02182: YDG/SRA domain, PF00097: Zinc finger, C3HC4
type (RING finger), PF00628: PHD-finger
Length = 642
Score = 33.9 bits (74), Expect = 0.13
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +3
Query: 192 LECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
L C+ C+ V CGH C C +W+ ++ C C++ I
Sbjct: 144 LMCSFCMQLPERPVTKPCGHNACLKCFEKWM--GQGKRTCGKCRSII 188
>At1g57820.1 68414.m06560 zinc finger (C3HC4-type RING finger)
family protein low similarity to nuclear protein np95
[Mus musculus] GI:4220590; contains Pfam profiles
PF02182: YDG/SRA domain, PF00097: Zinc finger, C3HC4
type (RING finger), PF00628: PHD-finger
Length = 645
Score = 33.9 bits (74), Expect = 0.13
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +3
Query: 192 LECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
L C+ C+ V CGH C C +W+ ++ C C++ I
Sbjct: 144 LMCSFCMQLPERPVTKPCGHNACLKCFEKWM--GQGKRTCGKCRSII 188
>At5g59550.1 68418.m07462 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 407
Score = 33.5 bits (73), Expect = 0.18
Identities = 21/63 (33%), Positives = 27/63 (42%)
Frame = +3
Query: 198 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPLYGRGNTK 377
C +T +A C HLF C+ WL R S CPVC+ + E R N
Sbjct: 202 CTEIFETETEAREMPCKHLFHDDCIVPWLSIRNS---CPVCRFELPSEP----NRRSNNN 254
Query: 378 QED 386
+ED
Sbjct: 255 EED 257
>At5g42200.1 68418.m05136 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 163
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Frame = +3
Query: 186 RMLECNICLDTARDA----VVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAIS 335
R EC +CL+ +V C H F C WL + VCPVC+A ++
Sbjct: 100 RSTECAVCLEDIESGQSTRLVPGCNHGFHQLCADTWLS---NHTVCPVCRAELA 150
>At5g41350.1 68418.m05025 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 212
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +3
Query: 195 ECNICL---DTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVC 320
+C ICL D +V+ C H F C+ +W+E + CPVC
Sbjct: 160 DCPICLEEYDIENPKLVAKCDHHFHLACILEWME---RSETCPVC 201
>At5g38895.1 68418.m04704 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 221
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +3
Query: 198 CNICLDT---ARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVC 320
C CLD +++ C H F C+++W+E + CPVC
Sbjct: 169 CPTCLDDYTLENPKIITKCSHHFHLSCIYEWME---RSETCPVC 209
>At5g37250.1 68418.m04475 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHA3b [gi:3790575], RHA3a [gi:3790573]; contains Pfam
domain zinc finger, C3HC4 type (RING finger) PF00097
Length = 192
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Frame = +3
Query: 180 DERMLECNICLD----TARDAVVSM--CGHLFCWPCLHQWLETRPSRQVCPVCK 323
DE C+ICL+ + D ++ + C HLF C+ +WL+ + S CP+C+
Sbjct: 131 DEEETTCSICLEDFSESHDDNIILLPDCFHLFHQNCIFEWLKRQRS---CPLCR 181
>At4g38140.1 68417.m05385 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 145
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = +3
Query: 174 KHDERMLECNICLDT--ARDAVVSM--CGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
K E + C ICL A DAV + C HLF C+ WL CP+C++ +
Sbjct: 54 KEKEEEICCPICLVEFEAEDAVTHLPRCAHLFHINCIEPWL--LRGHLTCPLCRSFV 108
>At4g23450.1 68417.m03380 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 153
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +3
Query: 174 KHDERMLECNICLDTAR---DAVVSMCGHLFCWPCLHQWLETRPSRQVCPVC 320
++ E + EC ICL+ +++ CGH F C+ W+E + CPVC
Sbjct: 96 QYREAIDECPICLEEYEIDNPKLLTKCGHDFHLACILAWME---RSEACPVC 144
>At4g17920.1 68417.m02670 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 zinc finger protein
ATL6 [Arabidopsis thaliana] GI:4928403; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 289
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Frame = +3
Query: 192 LECNICL-DTARDAVVSM---CGHLFCWPCLHQWLETRPSRQVCPVCK 323
LEC ICL + D V+ + C H+F C+ W E S + CPVC+
Sbjct: 108 LECAICLLEFDGDHVLRLLTTCYHVFHQECIDLWFE---SHRTCPVCR 152
>At4g17245.1 68417.m02593 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 166
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +3
Query: 195 ECNICLDTARDA----VVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
EC ICL +D V+ C H F C+ +WL + S CP C+ I
Sbjct: 101 ECIICLSEFQDGDTLRVLERCKHGFHVYCIQKWLSS--SHSSCPTCRTNI 148
>At4g09120.1 68417.m01505 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 345
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +3
Query: 192 LECNICLDTARDAV----VSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAIS 335
+EC ICL D + C H F C+ WL S CPVC+A +S
Sbjct: 121 VECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLS---SWSTCPVCRANLS 169
>At3g58720.1 68416.m06545 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 238
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +3
Query: 198 CNICLDT---ARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
C++CL+ +++ C H+F C+ WL+T+ CPVC+ I
Sbjct: 144 CSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQ---CPVCRFVI 188
>At3g07120.1 68416.m00848 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger)
Length = 360
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 183 ERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
E L C +C+ + A + CGH FC C E + CPVC + +
Sbjct: 307 EGELSCCVCMVKIKGASFTPCGHTFCKLCSK---ELMAQKGHCPVCSSFV 353
>At2g42350.1 68415.m05241 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 217
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = +3
Query: 174 KHDERMLECNICLDTARDA----VVSMCGHLFCWPCLHQWLETRPSRQVCPVCK 323
K+D EC +CL + ++ C H+F C+ WL T+ + CPVC+
Sbjct: 92 KNDVAGTECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQST---CPVCR 142
>At2g39100.1 68415.m04804 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 296
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +3
Query: 198 CNICLDTARD----AVVSMCGHLFCWPCLHQWLETRPSRQVCPVC 320
C ICL+ + AV+++C H +C C+ +W + + CP+C
Sbjct: 39 CPICLENLTERRSAAVITVCKHGYCLACIRKWSSFKRN---CPLC 80
>At2g27940.1 68415.m03387 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 237
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Frame = +3
Query: 183 ERMLECNICLDTARDA----VVSMCGHLFCWPCLHQWLETRPSRQVCPVCKA 326
+R +C ICL + V+ CGH+F C+ WL S CP+C++
Sbjct: 135 QRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLS---SYVTCPLCRS 183
>At1g72310.1 68414.m08359 zinc finger (C3HC4-type RING finger)
family protein (ATL3) identical to RING-H2 zinc finger
protein (ATL3) GB:AF132013 (Arabidopsis thaliana)
Length = 324
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +3
Query: 192 LECNICLDTA----RDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
LEC+ICL + ++ C H F C+ W + S CP+C+ +
Sbjct: 125 LECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQ---SHSTCPICRNTV 172
>At1g20823.1 68414.m02608 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 197
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +3
Query: 183 ERMLECNICLD--TARDA--VVSMCGHLFCWPCLHQWLETRPSRQVCPVCK 323
E+ EC ICL +A D V+ CGH F C+ WL + S CP C+
Sbjct: 106 EKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSS---CPSCR 153
>At1g18770.1 68414.m02340 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 106
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +3
Query: 198 CNICLDT---ARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCK 323
C ICL+ R V CGH F C+ +W ET S CP+C+
Sbjct: 59 CIICLEEFSEGRRVVTLPCGHDFDDECVLKWFETNHS---CPLCR 100
>At1g18760.1 68414.m02339 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 224
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 198 CNICLDTARDAVVSM---CGHLFCWPCLHQWLETRPSRQVCPVCK 323
C ICL+ D M CGH F C+ W ET CP+C+
Sbjct: 175 CTICLEEFNDGTKVMTLPCGHEFDDECVLTWFETNHD---CPLCR 216
>At5g05530.1 68418.m00600 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 199
Score = 33.1 bits (72), Expect = 0.23
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Frame = +3
Query: 195 ECNICLDTARDAVVSM----CGHLFCWPCLHQWLETRPSRQVCPVCKAAI-SREK 344
EC ICL+ S+ C H+F CL +W+ T+ S CP+C+ I SR K
Sbjct: 147 ECTICLEELCHDEESIETHDCCHVFHKLCLWRWIRTKSS---CPLCRHPIYSRPK 198
>At4g10160.1 68417.m01662 zinc finger (C3HC4-type RING finger)
family protein zinc finger protein, Arabidopsis
thaliana, gb:L76926
Length = 225
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +3
Query: 195 ECNICLDT--ARDAVVSM--CGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
+C++CL A + + M CGH F C+ WL S CP+C+ ++
Sbjct: 96 QCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWL---TSHTTCPLCRLSL 142
>At4g10150.1 68417.m01660 zinc finger (C3HC4-type RING finger)
family protein RING-H2 finger protein RHA1a, Arabidopsis
thaliana,AF078683
Length = 236
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +3
Query: 195 ECNICLDT--ARDAVVSM--CGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
+C++CL A + + M CGH F C+ WL S CP+C+ ++
Sbjct: 110 QCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWL---TSHTTCPLCRLSL 156
>At4g01023.1 68417.m00138 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 236
Score = 33.1 bits (72), Expect = 0.23
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +3
Query: 180 DERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVC 320
D L C+IC + D VV+ C H FC C L+ C VC
Sbjct: 80 DALPLACSICQNPFLDPVVTNCNHYFCDKCA---LKHHTENDTCFVC 123
>At3g45470.1 68416.m04910 zinc finger protein-related contains low
similarity to Swiss-Prot:O76924 ariadne-2 protein
(Ari-2) [Drosophila melanogaster]
Length = 222
Score = 33.1 bits (72), Expect = 0.23
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +3
Query: 198 CNICLDTA---RDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVC 320
C ICL+ R V+ C H C+PC++Q +E + P C
Sbjct: 6 CVICLEETKADRMFVMDKCLHRHCYPCVNQLVEVKLRNGTVPTC 49
>At2g20650.2 68415.m02422 zinc finger (C3HC4-type RING finger)
family protein
Length = 559
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Frame = +3
Query: 186 RMLECNICLDTA------RDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCK 323
R +C IC+ T D +V+ C H+F CL +W++ + CP C+
Sbjct: 505 RSRDCVICMTTIDLRHRINDCMVTPCEHIFHSGCLQRWMDI---KMECPTCR 553
>At2g20650.1 68415.m02421 zinc finger (C3HC4-type RING finger)
family protein
Length = 559
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Frame = +3
Query: 186 RMLECNICLDTA------RDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCK 323
R +C IC+ T D +V+ C H+F CL +W++ + CP C+
Sbjct: 505 RSRDCVICMTTIDLRHRINDCMVTPCEHIFHSGCLQRWMDI---KMECPTCR 553
>At1g60360.1 68414.m06796 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 327
Score = 33.1 bits (72), Expect = 0.23
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 16/102 (15%)
Frame = +3
Query: 189 MLECNICLD---TARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCK--------AAIS 335
M +C +C++ DA C H++ C+ WL S CP+C+ A S
Sbjct: 221 MSQCTVCMEEFIVGGDATELPCKHIYHKDCIVPWLRLNNS---CPICRRDLPLVNTVAES 277
Query: 336 REKVIPLYGRGNTKQEDPR-----NKVPPRPAGQRTEPESTS 446
RE+ P+ + ++ PR N P R QR PE T+
Sbjct: 278 RERSNPI-RQDMPERRRPRWMQLGNIWPFRARYQRVSPEETA 318
>At1g53820.1 68414.m06126 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 310
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Frame = +3
Query: 192 LECNICLDTARDA----VVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
LEC +CL D V+ C H F C+ W + S CP+C+ +
Sbjct: 118 LECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQ---SHSTCPLCRNTV 165
>At1g33480.1 68414.m04144 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 508
Score = 33.1 bits (72), Expect = 0.23
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = +3
Query: 195 ECNICLDTAR--DAV--VSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPLYG 362
+C++CL + D + + +C H F C+ WL S CP+C+ A+ IP
Sbjct: 99 QCSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLWL---TSHTTCPLCRLAL-----IP--S 148
Query: 363 RGNTKQEDPRNKVPPRPAGQRTEPES 440
R Q+DP + ++PES
Sbjct: 149 RSRQSQDDPVPSLVSPDEEVSSQPES 174
>At1g04790.1 68414.m00475 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 634
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +3
Query: 198 CNICLDTAR--DAVVSM-CGHLFCWPCLHQWLETRPSRQVCPVCKAAIS 335
C ICL+T + D + + C H F C+ WL S CPVCK++++
Sbjct: 589 CVICLETPKIGDTIRHLPCLHKFHKDCIDPWLGRSKS---CPVCKSSVT 634
>At5g41450.1 68418.m05034 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 164
Score = 32.7 bits (71), Expect = 0.31
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Frame = +3
Query: 174 KHDERMLECNICLDTARDAV----VSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISRE 341
K + C ICL+ D ++MC H+F C+ WL CP C+ +++
Sbjct: 102 KEGSNKIFCPICLEEFEDGHEIIRINMCRHVFHRFCIDPWLN---QNLTCPNCRCSLTAR 158
Query: 342 K 344
K
Sbjct: 159 K 159
>At5g37230.1 68418.m04472 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHA3b, Arabidopsis thaliana, PIR:T41745 [gi:3790575];
contains Pfam domain zinc finger, C3HC4 type (RING
finger) PF00097
Length = 208
Score = 32.7 bits (71), Expect = 0.31
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Frame = +3
Query: 180 DERMLECNICLD----TARDAVVSM--CGHLFCWPCLHQWLETRPSRQVCPVCK 323
DE C+IC++ + D ++ + C HLF C+ +WL+ + S CP+C+
Sbjct: 147 DEEETTCSICMEDFSESHDDNIILLPDCFHLFHQSCIFKWLKRQRS---CPLCR 197
>At5g06490.1 68418.m00728 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
ATL6 [Arabidopsis thaliana] GI:4928403; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 197
Score = 32.7 bits (71), Expect = 0.31
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +3
Query: 198 CNICLDTARDA----VVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAA 329
C+ICL + V+ C HLF C+ WL P+ CPVC+ +
Sbjct: 129 CSICLADYKKMDMIRVLPDCNHLFHDNCVDPWLRLHPT---CPVCRTS 173
>At5g05810.1 68418.m00639 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 353
Score = 32.7 bits (71), Expect = 0.31
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 9/85 (10%)
Frame = +3
Query: 192 LECNICL----DTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPLY 359
LEC +CL T ++ C H F C+ WL+ + CP+C+ + E ++ L
Sbjct: 90 LECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLD---AHSTCPLCRYRVDPEDIL-LI 145
Query: 360 GRGNTKQE-----DPRNKVPPRPAG 419
G N+ E D N V P G
Sbjct: 146 GDCNSWFELQFSKDESNSVNNNPPG 170
>At4g35480.1 68417.m05042 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 200
Score = 32.7 bits (71), Expect = 0.31
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +3
Query: 195 ECNICLDTARDA----VVSMCGHLFCWPCLHQWLETRPSRQVCPVCK 323
EC IC+ + ++ +C H F C+ +WL +R S CP C+
Sbjct: 112 ECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSS---CPSCR 155
>At4g17910.1 68417.m02669 zinc finger (C3HC4-type RING finger) family
protein / pentatricopeptide (PPR) repeat-containing
protein contains Pfam domains PF01535: PPR repeat and
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 1208
Score = 32.7 bits (71), Expect = 0.31
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +3
Query: 195 ECNICLDTARD----AVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
+C+ICL + ++ C H F C+ +WL+ S CP+C+A I
Sbjct: 1052 DCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLK---SHSNCPLCRAKI 1098
>At4g12190.1 68417.m01936 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 71
Score = 32.7 bits (71), Expect = 0.31
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Frame = +3
Query: 198 CNICLDTA------RDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
C+ICL++ RD C H+F CL +WL+ + CP+C+ +
Sbjct: 22 CSICLESLVSGPKPRDITRMTCSHVFHNGCLLEWLK---RKNTCPLCRTEL 69
>At5g64920.1 68418.m08166 COP1-interacting protein (CIP8) / zinc
finger (C3HC4-type RING finger) family protein identical
to COP1-interacting protein CIP8 [Arabidopsis thaliana]
gi|5929906|gb|AAD56636; contains Pfam profile: PF00097
zinc finger, C3HC4 type
Length = 334
Score = 32.3 bits (70), Expect = 0.41
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = +3
Query: 183 ERMLECNICLD---TARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCK 323
E ++ C +C D CGH + C+ WL TR S CPVC+
Sbjct: 252 EMVMVCAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRNS---CPVCR 298
>At5g40250.1 68418.m04883 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 finger protein RHX1a
[Arabidopsis thaliana] GI:3790591; contains Pfam profile
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 376
Score = 32.3 bits (70), Expect = 0.41
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = +3
Query: 195 ECNICL----DTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
+C +CL + + ++ MC H F C+ WL+ S CP+C+ +
Sbjct: 142 DCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQ---SNSTCPLCRGTL 188
>At5g15790.2 68418.m01847 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 232
Score = 32.3 bits (70), Expect = 0.41
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +3
Query: 198 CNICLD---TARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVC 320
C CL+ + +V+ C H F C+++W+E + CPVC
Sbjct: 182 CPTCLEEYISENPKIVTKCSHHFHLSCIYEWMERSEN---CPVC 222
>At5g15790.1 68418.m01846 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 232
Score = 32.3 bits (70), Expect = 0.41
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +3
Query: 198 CNICLD---TARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVC 320
C CL+ + +V+ C H F C+++W+E + CPVC
Sbjct: 182 CPTCLEEYISENPKIVTKCSHHFHLSCIYEWMERSEN---CPVC 222
>At5g10380.1 68418.m01204 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 301
Score = 32.3 bits (70), Expect = 0.41
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +3
Query: 195 ECNICLDTARD----AVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
EC++CL+ + ++ C H F C+ WL S + CP+C+A +
Sbjct: 134 ECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWL---LSHKNCPLCRAPV 180
>At5g07040.1 68418.m00797 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 159
Score = 32.3 bits (70), Expect = 0.41
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +3
Query: 198 CNICLDT--ARDAV--VSMCGHLFCWPCLHQWLETRPSRQVCPVCK 323
C+ICL AR+ V + C H F C+ +WL T + CP+C+
Sbjct: 94 CSICLCDYEAREPVRCIPECNHCFHTDCVDEWLRTSAT---CPLCR 136
>At5g04460.1 68418.m00443 expressed protein
Length = 863
Score = 32.3 bits (70), Expect = 0.41
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 198 CNICLDTARDAVVSMCGHL-FCWPCLHQWLETRPSRQVCPVCKAAI 332
C +C D DA++ CGH+ C C ++ + CP+C+A I
Sbjct: 811 CCVCCDNHIDALLYRCGHMCTCSKCANELVRNGGK---CPLCRAPI 853
>At5g01880.1 68418.m00107 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 159
Score = 32.3 bits (70), Expect = 0.41
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +3
Query: 195 ECNICL----DTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
EC ICL D R V+ C H F C+ WL + S CP C+ ++
Sbjct: 104 ECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSS---CPNCRHSL 150
>At4g21350.1 68417.m03084 U-box domain-containing protein similar to
immediate-early fungal elicitor protein CMPG1
[Petroselinum crispum] GI:14582198; contains Pfam
profile PF04564: U-box domain
Length = 374
Score = 32.3 bits (70), Expect = 0.41
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +3
Query: 198 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAIS 335
C I L+ D V+ GH F + QW+++ + CP+ K +S
Sbjct: 11 CPISLEIMSDPVILQSGHTFDRVSIQQWIDS--GNRTCPITKLPLS 54
>At4g11370.1 68417.m01833 zinc finger (C3HC4-type RING finger)
family protein strong similarity to RING-H2 finger
protein RHA1a [Arabidopsis thaliana] GI:3790554;
contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 159
Score = 32.3 bits (70), Expect = 0.41
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = +3
Query: 198 CNICL-DTARDAVVSM---CGHLFCWPCLHQWLETRPSRQVCPVCK 323
C +CL D D V CGH+F CL +W+ ++ CPVC+
Sbjct: 86 CTVCLSDFESDDKVRQLPKCGHVFHHYCLDRWI-VDYNKMKCPVCR 130
>At4g11360.1 68417.m01832 zinc finger (C3HC4-type RING finger)
family protein (RHA1b) identical to RING-H2 finger
protein RHA1b [Arabidopsis thaliana] GI:3790567
Length = 157
Score = 32.3 bits (70), Expect = 0.41
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Frame = +3
Query: 198 CNICL-DTARDAVVSM---CGHLFCWPCLHQWLETRPSRQVCPVCK-AAISREKVIP 353
C +CL D D + CGH+F CL +W+ ++ CP+C+ + EK P
Sbjct: 85 CTVCLSDFVSDDKIRQLPKCGHVFHHRCLDRWI-VDCNKITCPICRNRFLPEEKSTP 140
>At4g09110.1 68417.m01503 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 302
Score = 32.3 bits (70), Expect = 0.41
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +3
Query: 192 LECNICLDTARDAV----VSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAIS 335
+EC ICL D + C H F C+ WL S+ CP C+A +S
Sbjct: 121 VECAICLSEFVDKETLRWMPPCSHTFHANCIDVWLS---SQSTCPACRANLS 169
>At3g54780.2 68416.m06062 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|P79263
Inter-alpha-trypsin inhibitor heavy chain H4 precursor
{Sus scrofa}; contains Pfam profiles PF00097: Zinc
finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 676
Score = 32.3 bits (70), Expect = 0.41
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = +3
Query: 198 CNICLDTARDAV-----VSMCGHLFCWPCLHQWLETRPSRQVCPVCKA 326
C+ICL+ ++ + C H+F + C+ + QVCPVC+A
Sbjct: 75 CSICLNKMKEGCGHAIFTAECSHMFHFHCIAS--NVKHGNQVCPVCRA 120
>At3g54780.1 68416.m06061 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|P79263
Inter-alpha-trypsin inhibitor heavy chain H4 precursor
{Sus scrofa}; contains Pfam profiles PF00097: Zinc
finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 675
Score = 32.3 bits (70), Expect = 0.41
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = +3
Query: 198 CNICLDTARDAV-----VSMCGHLFCWPCLHQWLETRPSRQVCPVCKA 326
C+ICL+ ++ + C H+F + C+ + QVCPVC+A
Sbjct: 74 CSICLNKMKEGCGHAIFTAECSHMFHFHCIAS--NVKHGNQVCPVCRA 119
>At3g02290.2 68416.m00211 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger motif, C3HC4 type
(RING finger)
Length = 231
Score = 32.3 bits (70), Expect = 0.41
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +3
Query: 198 CNICLD---TARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVC 320
C CL+ + +V+ C H F C+++W+E + CPVC
Sbjct: 181 CPTCLEEYTSENPKIVTKCSHHFHLSCIYEWMERSEN---CPVC 221
>At3g02290.1 68416.m00210 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger motif, C3HC4 type
(RING finger)
Length = 231
Score = 32.3 bits (70), Expect = 0.41
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +3
Query: 198 CNICLD---TARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVC 320
C CL+ + +V+ C H F C+++W+E + CPVC
Sbjct: 181 CPTCLEEYTSENPKIVTKCSHHFHLSCIYEWMERSEN---CPVC 221
>At1g68070.1 68414.m07776 zinc finger (C3HC4-type RING finger)
family protein very low similarity to RING-H2 finger
protein RHG1a [Arabidopsis thaliana] GI:3822225;
contains Pfam profile: PF00097 zinc finger, C3HC4 type
(RING finger)
Length = 343
Score = 32.3 bits (70), Expect = 0.41
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +3
Query: 195 ECNICLDTARDA--VVSM-CGHLFCWPCLHQWLETRPSRQVCPVCK 323
+C ICL + D +VS+ C H F C+ +WL+ + CP+CK
Sbjct: 291 DCCICLSSYEDGAELVSLPCNHHFHSTCIVKWLKMNAT---CPLCK 333
>At1g61620.1 68414.m06943 expressed protein contains Pfam profile:
PF01363 FYVE zinc finger
Length = 310
Score = 32.3 bits (70), Expect = 0.41
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +3
Query: 198 CNICLDTARDAV-VSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPLY--GRG 368
C + L V +S CGH+FC C +++ P +VC VC ++ L G G
Sbjct: 224 CKVTLTNTMSLVALSSCGHVFCKKCAEKFM---PVDKVCLVCDKPCKDRNLVGLKKGGTG 280
Query: 369 NTKQED 386
+ +D
Sbjct: 281 FAEHDD 286
>At1g12760.1 68414.m01481 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|Q9NVW2 RING finger
protein 12 (LIM domain interacting RING finger protein)
{Homo sapiens}; contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 368
Score = 32.3 bits (70), Expect = 0.41
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +3
Query: 195 ECNICLDTARDAVVSM---CGHLFCWPCLHQWLETRPSRQVCPVCK 323
EC ICL D CGH F C+ +WL + CP+CK
Sbjct: 312 ECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINAT---CPLCK 354
>At1g05890.1 68414.m00617 zinc finger protein-related contains low
similarity to zinc finger proteins and Pfam PF01485: IBR
domain
Length = 552
Score = 32.3 bits (70), Expect = 0.41
Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 10/66 (15%)
Frame = +3
Query: 180 DERMLECNICLD--TARDAVVSMCGHLFCWPCLHQWLETR----PSRQV--C--PVCKAA 329
D R C IC D T + V CGH FC C ++ T P + C P C AA
Sbjct: 126 DGREFTCGICFDSYTLEEIVSVSCGHPFCATCWTGYISTTINDGPGCLMLKCPDPSCPAA 185
Query: 330 ISREKV 347
I R+ +
Sbjct: 186 IGRDMI 191
>At5g63750.1 68418.m08001 IBR domain-containing protein contains a
Prosite:PS00518 Zinc finger, C3HC4 type (RING finger),
signature and Pfam:PF01485 IBR domain
Length = 536
Score = 31.9 bits (69), Expect = 0.54
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +3
Query: 231 VVSMCGHLFCWPCL 272
VV +CGH+FCW C+
Sbjct: 208 VVCLCGHIFCWRCM 221
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 13/67 (19%)
Frame = +3
Query: 186 RMLECNICLDTARDA--VVS--MCGHLFCWPCLHQWLETR-------PSRQVCP--VCKA 326
++ C IC T D ++S C H+FC C ++LE +R CP C+A
Sbjct: 83 KISSCGICFKTCDDGDYLISTPFCSHMFCKSCWRKYLEKNFYLVEKTQTRISCPHGACQA 142
Query: 327 AISREKV 347
A+ + +
Sbjct: 143 AVGPDTI 149
>At5g20570.1 68418.m02442 ring-box protein-related similar to
ring-box protein 1 GI:4769004 from [Homo sapiens]
Length = 118
Score = 31.9 bits (69), Expect = 0.54
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Frame = +3
Query: 192 LEC--NICLDTARDAVVS--MCGHLFCWPCLHQWLETRPSRQVCPV 317
+EC N T+ + V+ +C H F + C+ +WL+T RQVCP+
Sbjct: 64 IECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT---RQVCPL 106
>At5g05910.1 68418.m00653 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 151
Score = 31.9 bits (69), Expect = 0.54
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 9/56 (16%)
Frame = +3
Query: 198 CNICLDTAR------DAVV---SMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISR 338
C ICL+ + D VV S C H F C+ WL Q CP+C++ + R
Sbjct: 92 CPICLEDLKKVDNDDDKVVVCLSKCNHSFHMNCIFSWLR---ESQDCPICRSTVYR 144
>At5g03200.1 68418.m00268 zinc finger (C3HC4-type RING finger)
family protein contains weak similarity to zinc finger
proteins
Length = 337
Score = 31.9 bits (69), Expect = 0.54
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +3
Query: 195 ECNICLDTARDAVVSMCGHL-FCWPCLHQWLETRPSRQVCPVCKAAI 332
EC +CL RD V C H+ C C R +CPVC+ +
Sbjct: 284 ECVVCLSEPRDTTVLPCRHMCMCSGCAK---ALRFQTNLCPVCRQPV 327
>At3g55530.1 68416.m06166 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 273
Score = 31.9 bits (69), Expect = 0.54
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +3
Query: 174 KHDERMLECNICLD--TARDAVVSM-CGHLFCWPCLHQWLETRPSRQVCPVCK 323
K E L C++CL+ T + V ++ C H F C+ WL + CPVCK
Sbjct: 203 KGTEDELTCSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWLR---QQGTCPVCK 252
>At3g43750.1 68416.m04674 zinc finger (C3HC4-type RING finger)
family protein contains a zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 346
Score = 31.9 bits (69), Expect = 0.54
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = +3
Query: 198 CNICLDTARDAV----VSMCGHLFCWPCLHQWLETRPSRQVCPVC 320
C+IC + +A V++CGH FC C+ ++E + P C
Sbjct: 155 CSICFNNVLEAEKMFSVAICGHQFCVECVKHYIEVKLLEGGVPRC 199
>At3g42830.1 68416.m04485 ring-box protein Roc1/Rbx1/Hrt1, putative
E3 ubiquitin ligase, SCF complex subunit; contains
similarity to ring-box protein 1 RBX1 GI:4769004 from
[Homo sapiens]
Length = 115
Score = 31.9 bits (69), Expect = 0.54
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Frame = +3
Query: 192 LEC--NICLDTARDAVVS--MCGHLFCWPCLHQWLETRPSRQVCPV 317
+EC N T+ + V+ +C H F + C+ +WL+T RQVCP+
Sbjct: 61 IECLANQASATSEECTVAWGVCNHAFHFHCISRWLKT---RQVCPL 103
>At3g15740.1 68416.m01994 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 224
Score = 31.9 bits (69), Expect = 0.54
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +3
Query: 198 CNICLDTAR-----DAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKA 326
C IC+D R +A C H+F C +WL + +CPVC+A
Sbjct: 176 CVICMDNIRVGSDVEAGRMPCSHVFHRTCGEEWLR---NSGICPVCRA 220
>At3g15070.1 68416.m01906 zinc finger (C3HC4-type RING finger)
family protein similar to C-terminal zinc-finger
[Glycine max] GI:558543; contains Pfam profile: PF00097
zinc finger, C3HC4 type (RING finger)
Length = 486
Score = 31.9 bits (69), Expect = 0.54
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Frame = +3
Query: 198 CNICLDTAR--DAVVSM-CGHLFCWPCLHQWLETRPSRQVCPVCKA---AISREKVIPLY 359
C IC + + D + ++ C H + CL +WL + VCP+CK+ I ++K + L
Sbjct: 428 CTICQENYKNEDKIATLDCMHKYHAECLKKWLVI---KNVCPICKSEALVIEKKKKLRLS 484
Query: 360 GR 365
R
Sbjct: 485 SR 486
>At3g01650.1 68416.m00096 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 489
Score = 31.9 bits (69), Expect = 0.54
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 198 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
C ICL ++ CGH C C P +VCP+C+A I
Sbjct: 446 CPICLSNPKNMAFG-CGHQTCCEC-------GPDLKVCPICRAPI 482
>At2g35910.1 68415.m04408 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 zinc finger
protein ATL6 [Arabidopsis thaliana] GI:4928403; contains
Pfam profile PF00097: Zinc finger, C3HC4 type (RING
finger)
Length = 217
Score = 31.9 bits (69), Expect = 0.54
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 243 CGHLFCWPCLHQWLETRPSRQVCPVCKAA 329
C HLF C+ WL P+ CPVC+ +
Sbjct: 166 CNHLFHLKCIDTWLRLNPT---CPVCRTS 191
>At2g35420.1 68415.m04341 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 254
Score = 31.9 bits (69), Expect = 0.54
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +3
Query: 195 ECNICLDTARDA----VVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
EC ICL D ++++C H F C+ W E + CPVC+ +
Sbjct: 102 ECAICLSEFSDEDTVRLITVCRHPFHSNCIDLWFELHKT---CPVCRCEL 148
>At2g17730.1 68415.m02054 zinc finger (C3HC4-type RING finger)
family protein contains Pfam PF00097: Zinc finger, C3HC4
type (RING finger) domain; similar to RING-H2 finger
protein RHA3a (GI:3790573) [Arabidopsis thaliana];
similar to ReMembR-H2 protein JR700 (GI:6942147)
[Arabidopsis thaliana]
Length = 241
Score = 31.9 bits (69), Expect = 0.54
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +3
Query: 198 CNICLDTAR--DAVVSM--CGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
C++CL + + V S+ C H+F PC+ WL S CP+C+ I
Sbjct: 196 CSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLLRHGS---CPMCRRDI 241
>At2g01735.1 68415.m00102 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger) domain
Length = 359
Score = 31.9 bits (69), Expect = 0.54
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +3
Query: 195 ECNICLDTARDAV---VSMCGHLFCWPCLHQWLETRPSRQVCPVCK 323
+C ICL + D C H F C+ +WL+ R + CP+CK
Sbjct: 306 DCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRAT---CPLCK 348
>At1g72220.1 68414.m08350 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger); similar to GI:4928397
from [Arabidopsis thaliana] (Plant Mol. Biol. 40 (4),
579-590 (1999))
Length = 413
Score = 31.9 bits (69), Expect = 0.54
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +3
Query: 195 ECNICLDTARD----AVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAIS 335
+C +CL+ + ++ C H F C+ WL + + CP+C+A I+
Sbjct: 176 DCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTN---CPLCRAGIA 223
>At1g51930.1 68414.m05854 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 132
Score = 31.9 bits (69), Expect = 0.54
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +3
Query: 198 CNICLDTARD----AVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
C ICL+ D + CGH+F C+ WL +Q CP C+ ++
Sbjct: 80 CPICLEEYEDDHQIRRLRNCGHVFHLLCIDSWL---TQKQNCPSCRRSV 125
>At5g63760.2 68418.m08003 IBR domain-containing protein contains
similarity to Swiss-Prot:Q94981 ariadne-1 protein
(Ari-1) [Drosophila melanogaster] and Pfam:PF01485 IBR
domain
Length = 452
Score = 31.5 bits (68), Expect = 0.71
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +3
Query: 231 VVSMCGHLFCWPCL 272
+V +CGH+FCW C+
Sbjct: 152 IVCLCGHIFCWRCM 165
>At5g63760.1 68418.m08002 IBR domain-containing protein contains
similarity to Swiss-Prot:Q94981 ariadne-1 protein
(Ari-1) [Drosophila melanogaster] and Pfam:PF01485 IBR
domain
Length = 452
Score = 31.5 bits (68), Expect = 0.71
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +3
Query: 231 VVSMCGHLFCWPCL 272
+V +CGH+FCW C+
Sbjct: 152 IVCLCGHIFCWRCM 165
>At5g60250.1 68418.m07552 zinc finger (C3HC4-type RING finger)
family protein contains a Prosite:PS00518 Zinc finger,
C3HC4 type (RING finger), signature and Pfam domain
PF01485: IBR domain
Length = 655
Score = 31.5 bits (68), Expect = 0.71
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +3
Query: 195 ECNICL-DTARDAVVSM--CGHLFCWPCLHQWLETRPSRQVCPVC 320
EC IC D + + S+ C H FC+ C+ Q +E + + P C
Sbjct: 300 ECAICFNDIVAEGMFSVDKCRHRFCFQCVKQHVEVKLLHGMAPKC 344
>At5g57750.1 68418.m07219 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 zinc finger protein
ATL4 [Arabidopsis thaliana] GI:4928399; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 210
Score = 31.5 bits (68), Expect = 0.71
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = +3
Query: 174 KHDERMLECNICLD--TARDAV--VSMCGHLFCWPCLHQWLETRPSRQVCPVCK 323
+HD + +C +CL TA D + + C H F C+ WL T CP+C+
Sbjct: 116 RHD--LSDCAVCLREFTAEDELRLLPKCSHAFHVECIDTWLLT---NSTCPLCR 164
>At5g42940.1 68418.m05235 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 691
Score = 31.5 bits (68), Expect = 0.71
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 243 CGHLFCWPCLHQWLETRPSRQVCPVCK 323
CGH F C+ +WL+ + +CP+CK
Sbjct: 655 CGHEFHSQCIKEWLK---QKNLCPICK 678
>At4g35840.1 68417.m05091 zinc finger (C3HC4-type RING finger)
family protein contains a TG non-consensus donor splice
site at exon 2; contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 236
Score = 31.5 bits (68), Expect = 0.71
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +3
Query: 198 CNICLDTAR--DAVVSM--CGHLFCWPCLHQWLETRPSRQVCPVCK 323
C++CL + + V S+ C H+F PC+ WL S CP+C+
Sbjct: 191 CSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLFRHGS---CPMCR 233
>At4g28370.1 68417.m04061 zinc finger (C3HC4-type RING finger)
family protein contains Pfam PF00097: Zinc finger, C3HC4
type (RING finger)
Length = 466
Score = 31.5 bits (68), Expect = 0.71
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Frame = +3
Query: 186 RMLECNICLDT------ARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
R +C IC+ D +V+ C H F CL +W++ + CP C+ ++
Sbjct: 412 RTTDCVICMTAIDLRQHTSDCMVTPCEHFFHSGCLQRWMDI---KMECPTCRRSL 463
>At2g18670.1 68415.m02175 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 181
Score = 31.5 bits (68), Expect = 0.71
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Frame = +3
Query: 195 ECNICLDTARDAV----VSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
+C +C D R + CGH+F C+ WL CP+C+A +
Sbjct: 109 DCVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTWL---LKASTCPICRARV 155
>At2g15580.1 68415.m01784 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 196
Score = 31.5 bits (68), Expect = 0.71
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +3
Query: 195 ECNICLDTAR--DAVVSM-CGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
+C ICLD + + +V + C H F CL WL+T CP C+ I
Sbjct: 149 DCAICLDRFKKGETLVHLPCAHKFHSICLLPWLDT---NVYCPYCRTDI 194
>At1g74410.1 68414.m08620 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 223
Score = 31.5 bits (68), Expect = 0.71
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = +3
Query: 186 RMLECNICLDTARDAVVSM----CGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
++ C ICL + ++ C H F C+ +WL S CP+C+ A+
Sbjct: 172 QVTHCTICLQDIKTGEITRSLPKCDHTFHLVCVDKWLIRHGS---CPICRQAV 221
>At1g63170.1 68414.m07139 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|Q06003 Goliath
protein (G1 protein) {Drosophila melanogaster}; contains
Pfam profile PF00097: Zinc finger, C3HC4 type (RING
finger)
Length = 381
Score = 31.5 bits (68), Expect = 0.71
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +3
Query: 195 ECNICLDTARDAVVSM---CGHLFCWPCLHQWLETRPSRQVCPVCK 323
EC ICL D CGH F C+ +WL + CP+CK
Sbjct: 324 ECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINAT---CPLCK 366
>At1g28040.1 68414.m03433 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 336
Score = 31.5 bits (68), Expect = 0.71
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = +3
Query: 198 CNICLD--TARDAVVSM--CGHLFCWPCLHQWLETRPSRQVCPVCK 323
C ICL +++ V M C H F C+ +WL+ S CPVC+
Sbjct: 290 CPICLSEYASKETVRCMPECDHCFHVQCIDEWLKIHSS---CPVCR 332
>At1g26800.1 68414.m03266 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 204
Score = 31.5 bits (68), Expect = 0.71
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +3
Query: 195 ECNICLDT--ARDAVVSM-CGHLFCWPCLHQWLETRPSRQVCPVCK 323
EC ICL+ + + V M C H F C+ +WL S CPVC+
Sbjct: 112 ECVICLEEWKSEETVKEMPCKHRFHGGCIEKWLGFHGS---CPVCR 154
>At1g14200.1 68414.m01680 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 179
Score = 31.5 bits (68), Expect = 0.71
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +3
Query: 198 CNICLD--TARDAVVSM-CGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKV 347
C ICLD + D M C H F C+ +WL + CP+C+ + E+V
Sbjct: 109 CAICLDEWSKGDVAAEMPCKHKFHSKCVEEWLGRHAT---CPMCRYEMPVEEV 158
>At5g20910.1 68418.m02483 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 310
Score = 31.1 bits (67), Expect = 0.94
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +3
Query: 195 ECNICLDTA--RDAVVSM-CGHLFCWPCLHQWLETRPSRQVCPVCK 323
EC IC + D + + C H F PCL WL+ S CP+C+
Sbjct: 229 ECCICKENLVIGDKMQELPCKHTFHPPCLKPWLDEHNS---CPICR 271
>At5g08139.1 68418.m00949 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 376
Score = 31.1 bits (67), Expect = 0.94
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +3
Query: 180 DERMLECNICLDT---ARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCK 323
D+ L C +C D AV C H + C+ WL+ R + CPVC+
Sbjct: 303 DDGGLVCAVCKDEMNIGNKAVQLPCNHKYHSECIVPWLKVRNT---CPVCR 350
>At4g34040.1 68417.m04830 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 666
Score = 31.1 bits (67), Expect = 0.94
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 243 CGHLFCWPCLHQWLETRPSRQVCPVCK 323
CGH F C+ QWL + +CP+CK
Sbjct: 637 CGHEFHTACVKQWLML---KNLCPICK 660
>At4g11680.1 68417.m01866 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|Q9WTV7 RING finger
protein 12 (LIM domain interacting RING finger protein)
{Mus musculus}; contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 390
Score = 31.1 bits (67), Expect = 0.94
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = +3
Query: 195 ECNICLDTARDAVVSM---CGHLFCWPCLHQWLETRPSRQVCPVCK 323
EC ICL D V C H F C+ +WL SR CP+CK
Sbjct: 337 ECCICLCEYEDGVELRELPCNHHFHCTCIDKWLHIN-SR--CPLCK 379
>At3g47180.1 68416.m05123 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 210
Score = 31.1 bits (67), Expect = 0.94
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 183 ERMLECNICLDTARDAVVSM-CGHLFCWPCLHQWLETRPSRQVCPVC 320
+R + C + + VV C H + C+ +WLET +++CP+C
Sbjct: 160 DRCVVCQMEFEERESLVVLRPCDHPYHSECITKWLET---KKICPIC 203
>At3g46620.1 68416.m05061 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 395
Score = 31.1 bits (67), Expect = 0.94
Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = +3
Query: 177 HDERMLECNICLDTARDAVVSM---CGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKV 347
H + C +C + + C H+F C+ WL R S CPVC+ + + +
Sbjct: 208 HTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNS---CPVCRFELPSDPI 264
>At2g46160.1 68415.m05740 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 zinc finger protein
ATL6 [Arabidopsis thaliana] GI:4928403; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 214
Score = 31.1 bits (67), Expect = 0.94
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = +3
Query: 198 CNICLDTARDA----VVSMCGHLFCWPCLHQWLETRPSRQVCPVCK 323
C+ICL ++A ++ C H F CL WL+ S CPVC+
Sbjct: 138 CSICLCEYKEAEMLRMMPECKHYFHLCCLDAWLKLNGS---CPVCR 180
>At2g42360.1 68415.m05242 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 236
Score = 31.1 bits (67), Expect = 0.94
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Frame = +3
Query: 195 ECNICLDTARDA----VVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 332
EC +CL ++ + C H+F C+ WL T CPVC+ +
Sbjct: 107 ECAVCLSVLKEQDKARELPNCKHIFHVDCVDTWLTT---CSTCPVCRTEV 153
>At1g74620.1 68414.m08642 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 249
Score = 31.1 bits (67), Expect = 0.94
Identities = 14/52 (26%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Frame = +3
Query: 198 CNICLDTARD--AVVSM--CGHLFCWPCLHQWLETRPSRQVCPVCKAAISRE 341
C IC++ + ++V+ C H F C+++WL+ +CP+C+++I ++
Sbjct: 183 CAICMEDYIEGSSIVAKLPCDHEFHGDCINKWLQL---NHMCPLCRSSIPKD 231
>At1g45180.1 68414.m05180 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 645
Score = 31.1 bits (67), Expect = 0.94
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 243 CGHLFCWPCLHQWLETRPSRQVCPVCK 323
CGH F C+ +WL+ + +CP+CK
Sbjct: 610 CGHDFHSQCIKEWLK---QKNLCPICK 633
>At5g63730.1 68418.m07999 IBR domain-containing protein contains
similarity to Swiss-Prot:Q94981 ariadne-1 protein
(Ari-1) [Drosophila melanogaster] and Pfam:PF01485 IBR
domain
Length = 506
Score = 30.7 bits (66), Expect = 1.2
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3
Query: 231 VVSMCGHLFCWPC 269
VV +CGH+FCW C
Sbjct: 205 VVCICGHIFCWRC 217
>At5g55970.2 68418.m06981 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 343
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +3
Query: 195 ECNICLDTARDA--VVSM-CGHLFCWPCLHQWLETRPSRQVCPVCKAAISR 338
EC ICL +D V + C H F C+ QWL CP+CK + R
Sbjct: 296 ECCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRI---ISCCPLCKQDLPR 343
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,451,813
Number of Sequences: 28952
Number of extensions: 388398
Number of successful extensions: 1661
Number of sequences better than 10.0: 341
Number of HSP's better than 10.0 without gapping: 1479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1606
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1921616800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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