SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_F06
         (859 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein.          32   2.3  
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.                32   2.3  
X07979-1|CAA30790.1|  798|Homo sapiens protein ( Human mRNA for ...    31   4.1  
Y13472-1|CAA73875.1| 1379|Homo sapiens FIM protein protein.            31   7.1  
D86972-1|BAA13208.2|  777|Homo sapiens KIAA0218 protein.               31   7.1  
BC101776-1|AAI01777.1|  761|Homo sapiens TatD DNase domain conta...    31   7.1  
BC101770-1|AAI01771.1|  761|Homo sapiens TatD DNase domain conta...    31   7.1  
BC090935-1|AAH90935.1|  761|Homo sapiens TatD DNase domain conta...    31   7.1  
BC036372-1|AAH36372.1| 1377|Homo sapiens zinc finger, MYM-type 2...    31   7.1  
AL138688-3|CAH71823.1|  755|Homo sapiens zinc finger, MYM-type 2...    31   7.1  
AL138688-1|CAH71822.1| 1375|Homo sapiens zinc finger, MYM-type 2...    31   7.1  
AL137119-3|CAH70135.1|  755|Homo sapiens zinc finger, MYM-type 2...    31   7.1  
AL137119-1|CAH70133.1| 1375|Homo sapiens zinc finger, MYM-type 2...    31   7.1  
AJ224901-1|CAA12204.1| 1377|Homo sapiens ZNF198 protein protein.       31   7.1  
AJ007676-1|CAA07604.1| 1377|Homo sapiens ZNF198 protein protein.       31   7.1  
AF060181-1|AAC23591.1| 1113|Homo sapiens zinc finger protein pro...    31   7.1  
AF035374-1|AAB88464.1|  699|Homo sapiens Cys-rich protein protein.     31   7.1  
AF012126-1|AAC01561.1|  757|Homo sapiens zinc finger protein pro...    31   7.1  
X68044-1|CAA48179.1|  280|Homo sapiens follicle stimulating horm...    30   9.4  
S73199-1|AAB32071.1|   51|Homo sapiens follicle-stimulating horm...    30   9.4  
S59900-1|AAB26480.1|  695|Homo sapiens follicle stimulating horm...    30   9.4  
M95489-1|AAA52478.1|  695|Homo sapiens follicle stimulating horm...    30   9.4  
M65085-1|AAA52477.1|  695|Homo sapiens follicle stimulating horm...    30   9.4  
BC125270-1|AAI25271.1|  669|Homo sapiens FSHR protein protein.         30   9.4  
BC118548-1|AAI18549.1|  695|Homo sapiens follicle stimulating ho...    30   9.4  
BC096831-1|AAH96831.1|  695|Homo sapiens follicle stimulating ho...    30   9.4  
AY429104-1|AAR07899.1|  695|Homo sapiens follicle stimulating ho...    30   9.4  
AC092533-1|AAX88895.1|   51|Homo sapiens unknown protein.              30   9.4  

>X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein.
          Length = 7962

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = +3

Query: 603  PYEVKVHVDKPYEVKVKVPTPYTVEKKIPYEVKVPVPXPLHCREKGPSSSE 755
            P  VK   ++P   K K P    ++K +P E KVPVP P   +   P   E
Sbjct: 6457 PIPVKPVPEEPVPTKPKAPPAKVLKKAVPEE-KVPVPIPKKLKPPPPKVPE 6506


>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
          Length = 30000

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = +3

Query: 603   PYEVKVHVDKPYEVKVKVPTPYTVEKKIPYEVKVPVPXPLHCREKGPSSSE 755
             P  VK   ++P   K K P    ++K +P E KVPVP P   +   P   E
Sbjct: 10719 PIPVKPVPEEPVPTKPKAPPAKVLKKAVPEE-KVPVPIPKKLKPPPPKVPE 10768


>X07979-1|CAA30790.1|  798|Homo sapiens protein ( Human mRNA for
           integrin beta 1 subunit. ).
          Length = 798

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 496 PYLSPTPSKRKFPLPSRNTSNTQYTYLNLTPLKRK 600
           PY+S TP+K + P  S     T ++Y N+  L  K
Sbjct: 194 PYISTTPAKLRNPCTSEQNCTTPFSYKNVLSLTNK 228


>Y13472-1|CAA73875.1| 1379|Homo sapiens FIM protein protein.
          Length = 1379

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +3

Query: 600  VPYEVKVHVDKPYEV-KVKVPTPYTVEKKIPYEVKVPVPXPLHCREKGPSSSE 755
            VP  V V++  P  +    +P P TV   +P  V V +P PL   EK P++ E
Sbjct: 887  VPIPVPVYIPVPMHMYSQNIPVPTTV--PVPVPVPVFLPAPLDSSEKIPAAIE 937


>D86972-1|BAA13208.2|  777|Homo sapiens KIAA0218 protein.
          Length = 777

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
 Frame = +3

Query: 624 VDKPYEVKVKVPTPYTV-EKKIPYEVKVPVPXPLHCREKGPSSSEIRXLXCPNHTKSLXK 800
           +D  Y+    VP  + V E+++   V +  P  +HCRE      EI     P   K    
Sbjct: 612 LDYSYKCTTPVPEQHKVFERQLQLAVSLKKPLVIHCREADEDLLEIMKKFVPPDYKIHRH 671

Query: 801 CLTKS 815
           C T S
Sbjct: 672 CFTGS 676


>BC101776-1|AAI01777.1|  761|Homo sapiens TatD DNase domain
           containing 2 protein.
          Length = 761

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
 Frame = +3

Query: 624 VDKPYEVKVKVPTPYTV-EKKIPYEVKVPVPXPLHCREKGPSSSEIRXLXCPNHTKSLXK 800
           +D  Y+    VP  + V E+++   V +  P  +HCRE      EI     P   K    
Sbjct: 596 LDYSYKCTTPVPEQHKVFERQLQLAVSLKKPLVIHCREADEDLLEIMKKFVPPDYKIHRH 655

Query: 801 CLTKS 815
           C T S
Sbjct: 656 CFTGS 660


>BC101770-1|AAI01771.1|  761|Homo sapiens TatD DNase domain
           containing 2 protein.
          Length = 761

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
 Frame = +3

Query: 624 VDKPYEVKVKVPTPYTV-EKKIPYEVKVPVPXPLHCREKGPSSSEIRXLXCPNHTKSLXK 800
           +D  Y+    VP  + V E+++   V +  P  +HCRE      EI     P   K    
Sbjct: 596 LDYSYKCTTPVPEQHKVFERQLQLAVSLKKPLVIHCREADEDLLEIMKKFVPPDYKIHRH 655

Query: 801 CLTKS 815
           C T S
Sbjct: 656 CFTGS 660


>BC090935-1|AAH90935.1|  761|Homo sapiens TatD DNase domain
           containing 2 protein.
          Length = 761

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
 Frame = +3

Query: 624 VDKPYEVKVKVPTPYTV-EKKIPYEVKVPVPXPLHCREKGPSSSEIRXLXCPNHTKSLXK 800
           +D  Y+    VP  + V E+++   V +  P  +HCRE      EI     P   K    
Sbjct: 596 LDYSYKCTTPVPEQHKVFERQLQLAVSLKKPLVIHCREADEDLLEIMKKFVPPDYKIHRH 655

Query: 801 CLTKS 815
           C T S
Sbjct: 656 CFTGS 660


>BC036372-1|AAH36372.1| 1377|Homo sapiens zinc finger, MYM-type 2
            protein.
          Length = 1377

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +3

Query: 600  VPYEVKVHVDKPYEV-KVKVPTPYTVEKKIPYEVKVPVPXPLHCREKGPSSSE 755
            VP  V V++  P  +    +P P TV   +P  V V +P PL   EK P++ E
Sbjct: 885  VPIPVPVYIPVPMHMYSQNIPVPTTV--PVPVPVPVFLPAPLDSSEKIPAAIE 935


>AL138688-3|CAH71823.1|  755|Homo sapiens zinc finger, MYM-type 2
           protein.
          Length = 755

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +3

Query: 600 VPYEVKVHVDKPYEV-KVKVPTPYTVEKKIPYEVKVPVPXPLHCREKGPSSSE 755
           VP  V V++  P  +    +P P TV   +P  V V +P PL   EK P++ E
Sbjct: 263 VPIPVPVYIPVPMHMYSQNIPVPTTV--PVPVPVPVFLPAPLDSSEKIPAAIE 313


>AL138688-1|CAH71822.1| 1375|Homo sapiens zinc finger, MYM-type 2
            protein.
          Length = 1375

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +3

Query: 600  VPYEVKVHVDKPYEV-KVKVPTPYTVEKKIPYEVKVPVPXPLHCREKGPSSSE 755
            VP  V V++  P  +    +P P TV   +P  V V +P PL   EK P++ E
Sbjct: 883  VPIPVPVYIPVPMHMYSQNIPVPTTV--PVPVPVPVFLPAPLDSSEKIPAAIE 933


>AL137119-3|CAH70135.1|  755|Homo sapiens zinc finger, MYM-type 2
           protein.
          Length = 755

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +3

Query: 600 VPYEVKVHVDKPYEV-KVKVPTPYTVEKKIPYEVKVPVPXPLHCREKGPSSSE 755
           VP  V V++  P  +    +P P TV   +P  V V +P PL   EK P++ E
Sbjct: 263 VPIPVPVYIPVPMHMYSQNIPVPTTV--PVPVPVPVFLPAPLDSSEKIPAAIE 313


>AL137119-1|CAH70133.1| 1375|Homo sapiens zinc finger, MYM-type 2
            protein.
          Length = 1375

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +3

Query: 600  VPYEVKVHVDKPYEV-KVKVPTPYTVEKKIPYEVKVPVPXPLHCREKGPSSSE 755
            VP  V V++  P  +    +P P TV   +P  V V +P PL   EK P++ E
Sbjct: 883  VPIPVPVYIPVPMHMYSQNIPVPTTV--PVPVPVPVFLPAPLDSSEKIPAAIE 933


>AJ224901-1|CAA12204.1| 1377|Homo sapiens ZNF198 protein protein.
          Length = 1377

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +3

Query: 600  VPYEVKVHVDKPYEV-KVKVPTPYTVEKKIPYEVKVPVPXPLHCREKGPSSSE 755
            VP  V V++  P  +    +P P TV   +P  V V +P PL   EK P++ E
Sbjct: 885  VPIPVPVYIPVPMHMYSQNIPVPTTV--PVPVPVPVFLPAPLDSSEKIPAAIE 935


>AJ007676-1|CAA07604.1| 1377|Homo sapiens ZNF198 protein protein.
          Length = 1377

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +3

Query: 600  VPYEVKVHVDKPYEV-KVKVPTPYTVEKKIPYEVKVPVPXPLHCREKGPSSSE 755
            VP  V V++  P  +    +P P TV   +P  V V +P PL   EK P++ E
Sbjct: 885  VPIPVPVYIPVPMHMYSQNIPVPTTV--PVPVPVPVFLPAPLDSSEKIPAAIE 935


>AF060181-1|AAC23591.1| 1113|Homo sapiens zinc finger protein
           protein.
          Length = 1113

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +3

Query: 600 VPYEVKVHVDKPYEV-KVKVPTPYTVEKKIPYEVKVPVPXPLHCREKGPSSSE 755
           VP  V V++  P  +    +P P TV   +P  V V +P PL   EK P++ E
Sbjct: 621 VPIPVPVYIPVPMHMYSQNIPVPTTV--PVPVPVPVFLPAPLDSSEKIPAAIE 671


>AF035374-1|AAB88464.1|  699|Homo sapiens Cys-rich protein protein.
          Length = 699

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +3

Query: 600 VPYEVKVHVDKPYEV-KVKVPTPYTVEKKIPYEVKVPVPXPLHCREKGPSSSE 755
           VP  V V++  P  +    +P P TV   +P  V V +P PL   EK P++ E
Sbjct: 613 VPIPVPVYIPVPMHMYSQNIPVPTTV--PVPVPVPVFLPAPLDSSEKIPAAIE 663


>AF012126-1|AAC01561.1|  757|Homo sapiens zinc finger protein
           protein.
          Length = 757

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +3

Query: 600 VPYEVKVHVDKPYEV-KVKVPTPYTVEKKIPYEVKVPVPXPLHCREKGPSSSE 755
           VP  V V++  P  +    +P P TV   +P  V V +P PL   EK P++ E
Sbjct: 265 VPIPVPVYIPVPMHMYSQNIPVPTTV--PVPVPVPVFLPAPLDSSEKIPAAIE 315


>X68044-1|CAA48179.1|  280|Homo sapiens follicle stimulating hormone
           receptor protein.
          Length = 280

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -3

Query: 104 AFLLLGKGNHGQRCHQNNRVLHC 36
           AFL LG G H + CH +NRV  C
Sbjct: 10  AFLRLGSGCHHRICHCSNRVFLC 32


>S73199-1|AAB32071.1|   51|Homo sapiens follicle-stimulating hormone
           receptor protein.
          Length = 51

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -3

Query: 104 AFLLLGKGNHGQRCHQNNRVLHC 36
           AFL LG G H + CH +NRV  C
Sbjct: 10  AFLSLGSGCHHRICHCSNRVFLC 32


>S59900-1|AAB26480.1|  695|Homo sapiens follicle stimulating hormone
           receptor protein.
          Length = 695

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -3

Query: 104 AFLLLGKGNHGQRCHQNNRVLHC 36
           AFL LG G H + CH +NRV  C
Sbjct: 10  AFLSLGSGCHHRICHCSNRVFLC 32


>M95489-1|AAA52478.1|  695|Homo sapiens follicle stimulating hormone
           receptor protein.
          Length = 695

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -3

Query: 104 AFLLLGKGNHGQRCHQNNRVLHC 36
           AFL LG G H + CH +NRV  C
Sbjct: 10  AFLSLGSGCHHRICHCSNRVFLC 32


>M65085-1|AAA52477.1|  695|Homo sapiens follicle stimulating hormone
           receptor protein.
          Length = 695

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -3

Query: 104 AFLLLGKGNHGQRCHQNNRVLHC 36
           AFL LG G H + CH +NRV  C
Sbjct: 10  AFLSLGSGCHHRICHCSNRVFLC 32


>BC125270-1|AAI25271.1|  669|Homo sapiens FSHR protein protein.
          Length = 669

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -3

Query: 104 AFLLLGKGNHGQRCHQNNRVLHC 36
           AFL LG G H + CH +NRV  C
Sbjct: 10  AFLSLGSGCHHRICHCSNRVFLC 32


>BC118548-1|AAI18549.1|  695|Homo sapiens follicle stimulating
           hormone receptor protein.
          Length = 695

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -3

Query: 104 AFLLLGKGNHGQRCHQNNRVLHC 36
           AFL LG G H + CH +NRV  C
Sbjct: 10  AFLSLGSGCHHRICHCSNRVFLC 32


>BC096831-1|AAH96831.1|  695|Homo sapiens follicle stimulating
           hormone receptor protein.
          Length = 695

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -3

Query: 104 AFLLLGKGNHGQRCHQNNRVLHC 36
           AFL LG G H + CH +NRV  C
Sbjct: 10  AFLSLGSGCHHRICHCSNRVFLC 32


>AY429104-1|AAR07899.1|  695|Homo sapiens follicle stimulating
           hormone receptor protein.
          Length = 695

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -3

Query: 104 AFLLLGKGNHGQRCHQNNRVLHC 36
           AFL LG G H + CH +NRV  C
Sbjct: 10  AFLSLGSGCHHRICHCSNRVFLC 32


>AC092533-1|AAX88895.1|   51|Homo sapiens unknown protein.
          Length = 51

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -3

Query: 104 AFLLLGKGNHGQRCHQNNRVLHC 36
           AFL LG G H + CH +NRV  C
Sbjct: 10  AFLSLGSGCHHRICHCSNRVFLC 32


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,193,587
Number of Sequences: 237096
Number of extensions: 1998648
Number of successful extensions: 5613
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 5085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5601
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -