Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_F05
         (867 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    33   0.011
U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.            25   3.9  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   9.1  

>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 33.1 bits (72), Expect = 0.011
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 348 IPYPVEKKTPYPVKVLVPQPYP 413
           +P+PV    P+ VKV +PQPYP
Sbjct: 178 VPHPVPIAVPHYVKVYIPQPYP 199



 Score = 31.9 bits (69), Expect = 0.026
 Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 6/27 (22%)
 Frame = +3

Query: 351 PYPVEKKTPYPVKVL------VPQPYP 413
           PYP+E + P+PV+VL      VP+PYP
Sbjct: 231 PYPIEVEKPFPVEVLKKFEVPVPKPYP 257



 Score = 25.4 bits (53), Expect = 2.3
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 348 IPYPVEKKTPYPVKVLVPQPYPXCQTCPLP 437
           +PY VEK  PYP++V  P P    +   +P
Sbjct: 224 VPYTVEK--PYPIEVEKPFPVEVLKKFEVP 251


>U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.
          Length = 280

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -1

Query: 555 HIYLDGDGSVDWDMYWVRHLLFDWV 481
           +I+L  DGS+ W    VR LLF+ V
Sbjct: 78  NIFLKTDGSLLWKNKPVRELLFEGV 102


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +3

Query: 483 PSRKEGALPSTCPSRQTRPRQGICARTLPRLKRKFMFQS 599
           P+R+     ST P+   R R     + LPR +R F F S
Sbjct: 275 PARRRSR--STRPTSWPRSRPTSKPKRLPRRRRPFFFSS 311


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 681,563
Number of Sequences: 2352
Number of extensions: 12044
Number of successful extensions: 114
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 114
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92613024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)