Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_F04
         (873 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0167 + 1422344-1424260,1424338-1424472,1424568-1424990,142...    38   0.011
04_03_0935 + 20918617-20919299,20919328-20919627,20919680-209198...    33   0.39 
01_01_1003 - 7939376-7939414,7939464-7939568,7939757-7939872,794...    29   4.9  
09_04_0161 - 15232074-15232139,15232299-15232406,15233417-152335...    28   8.5  
07_01_0387 + 2902957-2904705                                           28   8.5  
05_06_0170 - 26124178-26124670,26124699-26124703                       28   8.5  

>01_01_0167 +
           1422344-1424260,1424338-1424472,1424568-1424990,
           1425183-1425252,1425356-1425495,1425620-1425679,
           1425776-1425931,1426272-1426541
          Length = 1056

 Score = 37.9 bits (84), Expect = 0.011
 Identities = 39/132 (29%), Positives = 61/132 (46%)
 Frame = +1

Query: 121 GSPTDFQYFYEDEVYKINNRGQVVFGLVLENYEANSSDQESDIETPIQKGEIRVVWHPSG 300
           GS TD     E+  +K ++R +   G   +N  +N  D +S    P  K  +RV+W   G
Sbjct: 64  GSITDDDTDTEEHEHKSSHRTENG-GADGDNV-SNGVDVDSQSSLPDNK--VRVLWI-DG 118

Query: 301 TERVISEKSVGLADRSLMPGDVVRRLIAGKDTQRGYCRDIVMTAALQIVGTKHVIPSVAS 480
            E+     SV + DRS + GD+V         Q G   D+ +   LQ      +I  V+S
Sbjct: 119 VEKTEDIDSVVVMDRSFLHGDIVAS-ATDPTGQMGLVADVSLVVDLQ-GPHGEIIKGVSS 176

Query: 481 ERLQPLEEFSPG 516
           + L+ + EF+ G
Sbjct: 177 KDLRRIREFNVG 188


>04_03_0935 +
           20918617-20919299,20919328-20919627,20919680-20919836,
           20921338-20921397,20921554-20921670
          Length = 438

 Score = 32.7 bits (71), Expect = 0.39
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +1

Query: 214 YEANSSDQESDIETPIQKGEIRVVWHPSGTERVISEKSVGLA 339
           YE+   D + ++ET     +    W+ SGTE     + VGLA
Sbjct: 348 YESGGGDDDDEVETEYDSDDEVEAWYDSGTETSERHRRVGLA 389


>01_01_1003 -
           7939376-7939414,7939464-7939568,7939757-7939872,
           7941494-7942760
          Length = 508

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 718 PRKPLVPXIIFRRRVRAWSVDVAW 647
           P +PL P  +F    R W VD+ W
Sbjct: 232 PPRPLAPICVFSHHGRLWWVDLTW 255


>09_04_0161 -
           15232074-15232139,15232299-15232406,15233417-15233506,
           15233617-15233733,15234408-15234527,15234930-15236168
          Length = 579

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 591 MDHVSEYSDLXHVPSRGLLHATSTLHARTLRLNIIXG 701
           +D++ ++  L    S  L HAT  L A TLRL +  G
Sbjct: 454 IDYLEQWPALEKENSISLFHATEALKASTLRLPVTSG 490


>07_01_0387 + 2902957-2904705
          Length = 582

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +2

Query: 257 LYKKEKFVLYGILPAQNALYLRNRWVWQTGPLCQVMW 367
           +Y +EK   +G+LP + A     RWV   G  C  +W
Sbjct: 353 VYDREKASRFGVLPKRAADASELRWVEVPGCFCFHLW 389


>05_06_0170 - 26124178-26124670,26124699-26124703
          Length = 165

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = -3

Query: 451 CPRSARRPSLQCRGNIPSGYPCQR*GDEPHHL 356
           C RS R PS       P GYP  +   E HHL
Sbjct: 84  CRRSPRIPSASAAAAAPDGYPELQAALEVHHL 115


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,902,092
Number of Sequences: 37544
Number of extensions: 580293
Number of successful extensions: 1313
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1313
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)