Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_F04
         (873 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73971-12|CAC42267.1|  718|Caenorhabditis elegans Hypothetical p...    29   3.3  
Z72515-6|CAA96686.2|  718|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AC025716-12|AAK39604.1|  704|Caenorhabditis elegans Hypothetical...    28   7.6  

>Z73971-12|CAC42267.1|  718|Caenorhabditis elegans Hypothetical
           protein T11A5.6 protein.
          Length = 718

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
 Frame = +2

Query: 101 IWRGKIQDHRPTFNIFMKMKFI---KSTTGAKW 190
           +W GK  D  P + I MK KF+   K  TGA W
Sbjct: 394 VWNGKWSDGWPGWPIGMKQKFLNQRKDETGAFW 426


>Z72515-6|CAA96686.2|  718|Caenorhabditis elegans Hypothetical
           protein T11A5.6 protein.
          Length = 718

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
 Frame = +2

Query: 101 IWRGKIQDHRPTFNIFMKMKFI---KSTTGAKW 190
           +W GK  D  P + I MK KF+   K  TGA W
Sbjct: 394 VWNGKWSDGWPGWPIGMKQKFLNQRKDETGAFW 426


>AC025716-12|AAK39604.1|  704|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.15 protein.
          Length = 704

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +2

Query: 11  RMRHTLQSAVRKNLFL*KTKLLVSSDNSRQIWRGKIQDHRP 133
           ++R + + A+R ++FL      ++ D + Q+ R  IQ HRP
Sbjct: 383 KLRMSNKGAIRNDVFLNNRPFWLARDGTEQVPRVLIQMHRP 423


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,569,854
Number of Sequences: 27780
Number of extensions: 471438
Number of successful extensions: 1246
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1246
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)