Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_F04
         (873 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   4.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   6.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   6.4  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   6.4  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   8.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   8.5  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 381 RWQGYPEGILPRHCNDGRLADRGHETRDPQ 470
           RW  Y E + P  CN G  A    ++RDP+
Sbjct: 394 RWFTYQETVDPAGCNAGP-AKYYLKSRDPE 422


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 8/37 (21%), Positives = 15/37 (40%)
 Frame = +2

Query: 257 LYKKEKFVLYGILPAQNALYLRNRWVWQTGPLCQVMW 367
           L+    F +Y  L   N +++ +   W +     V W
Sbjct: 470 LHNSSPFSIYSFLERLNLIFMSSSLQWSSTHTLDVAW 506


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 8/37 (21%), Positives = 15/37 (40%)
 Frame = +2

Query: 257 LYKKEKFVLYGILPAQNALYLRNRWVWQTGPLCQVMW 367
           L+    F +Y  L   N +++ +   W +     V W
Sbjct: 508 LHNSSPFSIYSFLERLNLIFMSSSLQWSSTHTLDVAW 544


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -1

Query: 636 ERARVLGLNTPRRD-PSEDTKRSLLWTALE 550
           +RA  LG++TP++D P++      L  AL+
Sbjct: 446 QRAHRLGIDTPKKDGPTKSWSDESLNNALD 475


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -2

Query: 287 HTTRISPFCIGVSMSLSWSL 228
           H T+I+  C+ +S+S + +L
Sbjct: 733 HETQITTLCVAISLSATVTL 752


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -2

Query: 287 HTTRISPFCIGVSMSLSWSL 228
           H T+I+  C+ +S+S + +L
Sbjct: 823 HETQITTLCVAISLSATVTL 842


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 249,054
Number of Sequences: 438
Number of extensions: 5905
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)