Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_E22
(839 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 279 2e-75
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 279 2e-75
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 279 2e-75
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 277 9e-75
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 252 3e-67
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 252 3e-67
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 250 7e-67
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 250 7e-67
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 250 7e-67
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 249 2e-66
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 246 2e-65
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 246 2e-65
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 232 2e-61
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 230 8e-61
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 211 4e-55
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 186 1e-47
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 140 1e-33
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 139 3e-33
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 138 3e-33
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 136 1e-32
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 136 1e-32
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 134 1e-31
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 119 3e-27
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 119 3e-27
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 75 8e-14
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 75 8e-14
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.58
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 29 4.1
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 29 4.1
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 29 4.1
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 28 7.2
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 28 9.5
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 28 9.5
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 28 9.5
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 28 9.5
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 28 9.5
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 28 9.5
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 28 9.5
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 28 9.5
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 279 bits (683), Expect = 2e-75
Identities = 120/139 (86%), Positives = 133/139 (95%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 504
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 505 RIRKLADQCTGLQGFLIFH 561
RIR+LAD CTGLQGFL+FH
Sbjct: 121 RIRRLADNCTGLQGFLVFH 139
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +2
Query: 623 DYGKKSKLEFAIYPAPQV 676
DYGKK+KLEF+IYPAPQV
Sbjct: 160 DYGKKAKLEFSIYPAPQV 177
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 279 bits (683), Expect = 2e-75
Identities = 120/139 (86%), Positives = 133/139 (95%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 504
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 505 RIRKLADQCTGLQGFLIFH 561
RIR+LAD CTGLQGFL+FH
Sbjct: 121 RIRRLADNCTGLQGFLVFH 139
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +2
Query: 623 DYGKKSKLEFAIYPAPQV 676
DYGKK+KLEF+IYPAPQV
Sbjct: 160 DYGKKAKLEFSIYPAPQV 177
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 279 bits (683), Expect = 2e-75
Identities = 120/139 (86%), Positives = 133/139 (95%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 504
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 505 RIRKLADQCTGLQGFLIFH 561
RIR+LAD CTGLQGFL+FH
Sbjct: 121 RIRRLADNCTGLQGFLVFH 139
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +2
Query: 623 DYGKKSKLEFAIYPAPQV 676
DYGKK+KLEF+IYPAPQV
Sbjct: 160 DYGKKAKLEFSIYPAPQV 177
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 277 bits (678), Expect = 9e-75
Identities = 119/138 (86%), Positives = 132/138 (95%)
Frame = +1
Query: 148 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 327
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 328 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 507
VPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDR
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 508 IRKLADQCTGLQGFLIFH 561
IR+LAD CTGLQGFL+FH
Sbjct: 121 IRRLADNCTGLQGFLVFH 138
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +2
Query: 623 DYGKKSKLEFAIYPAPQV 676
DYGKK+KLEF+IYPAPQV
Sbjct: 159 DYGKKAKLEFSIYPAPQV 176
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 252 bits (616), Expect = 3e-67
Identities = 109/139 (78%), Positives = 127/139 (91%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 504
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 505 RIRKLADQCTGLQGFLIFH 561
RIR+LAD C+GLQGF +FH
Sbjct: 119 RIRRLADNCSGLQGFFVFH 137
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 623 DYGKKSKLEFAIYPAPQV 676
DYGKKSKLEF+IYPAPQV
Sbjct: 158 DYGKKSKLEFSIYPAPQV 175
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 252 bits (616), Expect = 3e-67
Identities = 109/139 (78%), Positives = 127/139 (91%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 504
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 505 RIRKLADQCTGLQGFLIFH 561
RIR+LAD C+GLQGF +FH
Sbjct: 119 RIRRLADNCSGLQGFFVFH 137
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 623 DYGKKSKLEFAIYPAPQV 676
DYGKKSKLEF+IYPAPQV
Sbjct: 158 DYGKKSKLEFSIYPAPQV 175
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 250 bits (613), Expect = 7e-67
Identities = 108/139 (77%), Positives = 127/139 (91%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 504
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 505 RIRKLADQCTGLQGFLIFH 561
RIR+LAD C+GLQGF +FH
Sbjct: 119 RIRRLADNCSGLQGFFVFH 137
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 623 DYGKKSKLEFAIYPAPQV 676
DYGKKSKLEF+IYPAPQV
Sbjct: 158 DYGKKSKLEFSIYPAPQV 175
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 250 bits (613), Expect = 7e-67
Identities = 107/139 (76%), Positives = 125/139 (89%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 504
HVPRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHYTIGKE++D+V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 505 RIRKLADQCTGLQGFLIFH 561
R+R+L ++C LQGFLIFH
Sbjct: 121 RVRRLTERCQSLQGFLIFH 139
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/18 (83%), Positives = 18/18 (100%)
Frame = +2
Query: 623 DYGKKSKLEFAIYPAPQV 676
DYGKK+KLEF+IYPAPQ+
Sbjct: 160 DYGKKAKLEFSIYPAPQI 177
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 250 bits (613), Expect = 7e-67
Identities = 108/139 (77%), Positives = 127/139 (91%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 504
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 505 RIRKLADQCTGLQGFLIFH 561
RIR+LAD C+GLQGF +FH
Sbjct: 119 RIRRLADNCSGLQGFFVFH 137
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 623 DYGKKSKLEFAIYPAPQV 676
DYGKKSKLEF+IYPAPQV
Sbjct: 158 DYGKKSKLEFSIYPAPQV 175
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 249 bits (610), Expect = 2e-66
Identities = 106/140 (75%), Positives = 125/140 (89%)
Frame = +1
Query: 142 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 321
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 322 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 501
KHVPRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+D+V+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM 124
Query: 502 DRIRKLADQCTGLQGFLIFH 561
DR+R+L + C GLQGFL+FH
Sbjct: 125 DRVRRLVENCRGLQGFLVFH 144
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2
Query: 623 DYGKKSKLEFAIYPAPQV 676
DYGKKSKLEF IYPAPQV
Sbjct: 165 DYGKKSKLEFCIYPAPQV 182
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 246 bits (601), Expect = 2e-65
Identities = 106/139 (76%), Positives = 125/139 (89%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 504
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 505 RIRKLADQCTGLQGFLIFH 561
RIR+LAD C+GLQGF +FH
Sbjct: 119 RIRRLADNCSGLQGFFVFH 137
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 623 DYGKKSKLEFAIYPAPQV 676
DYGKKSKLEF+IYPAPQV
Sbjct: 158 DYGKKSKLEFSIYPAPQV 175
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 246 bits (601), Expect = 2e-65
Identities = 106/139 (76%), Positives = 125/139 (89%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 504
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 505 RIRKLADQCTGLQGFLIFH 561
RIR+LAD C+GLQGF +FH
Sbjct: 119 RIRRLADNCSGLQGFFVFH 137
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 623 DYGKKSKLEFAIYPAPQV 676
DYGKKSKLEF+IYPAPQV
Sbjct: 158 DYGKKSKLEFSIYPAPQV 175
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 232 bits (568), Expect = 2e-61
Identities = 102/139 (73%), Positives = 117/139 (84%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 504
HVPR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D LD
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLD 117
Query: 505 RIRKLADQCTGLQGFLIFH 561
RIR+LA+ C GLQGF +FH
Sbjct: 118 RIRRLANNCEGLQGFFVFH 136
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/18 (83%), Positives = 18/18 (100%)
Frame = +2
Query: 623 DYGKKSKLEFAIYPAPQV 676
+YGKKSKLEF+IYPAPQ+
Sbjct: 157 EYGKKSKLEFSIYPAPQI 174
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 230 bits (563), Expect = 8e-61
Identities = 100/138 (72%), Positives = 118/138 (85%)
Frame = +1
Query: 148 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 327
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 328 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 507
VPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 127
Query: 508 IRKLADQCTGLQGFLIFH 561
+++LA+ C GLQGF+IFH
Sbjct: 128 VKRLAENCNGLQGFVIFH 145
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +2
Query: 623 DYGKKSKLEFAIYPAPQV 676
+YGKK KLEFAIYPAPQV
Sbjct: 166 EYGKKPKLEFAIYPAPQV 183
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 211 bits (516), Expect = 4e-55
Identities = 90/138 (65%), Positives = 110/138 (79%)
Frame = +1
Query: 148 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 327
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 328 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 507
VPRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++D+VLDR
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDR 124
Query: 508 IRKLADQCTGLQGFLIFH 561
IRK + C GLQGFL+FH
Sbjct: 125 IRKQTENCEGLQGFLVFH 142
Score = 37.5 bits (83), Expect = 0.012
Identities = 14/18 (77%), Positives = 18/18 (100%)
Frame = +2
Query: 623 DYGKKSKLEFAIYPAPQV 676
++GKKSKLEF++YPAPQV
Sbjct: 163 EFGKKSKLEFSVYPAPQV 180
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 186 bits (454), Expect = 1e-47
Identities = 80/117 (68%), Positives = 98/117 (83%)
Frame = +1
Query: 211 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 390
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 391 YRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFH 561
YR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+++LA+ C GLQGF+IFH
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFH 117
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +2
Query: 623 DYGKKSKLEFAIYPAPQV 676
+YGKK KLEFAIYPAPQV
Sbjct: 138 EYGKKPKLEFAIYPAPQV 155
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 140 bits (338), Expect = 1e-33
Identities = 67/139 (48%), Positives = 88/139 (63%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGK 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 504
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 505 RIRKLADQCTGLQGFLIFH 561
+RK A+ C LQGF + H
Sbjct: 119 VVRKEAEGCDCLQGFQLTH 137
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 139 bits (336), Expect = 3e-33
Identities = 67/139 (48%), Positives = 89/139 (64%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGK 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 504
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 505 RIRKLADQCTGLQGFLIFH 561
IRK A+ C LQGF + H
Sbjct: 119 VIRKEAEGCDCLQGFQLTH 137
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 138 bits (335), Expect = 3e-33
Identities = 67/139 (48%), Positives = 89/139 (64%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGK 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 504
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 505 RIRKLADQCTGLQGFLIFH 561
IRK A+ C LQGF + H
Sbjct: 119 VIRKEAEGCDCLQGFQLTH 137
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 136 bits (330), Expect = 1e-32
Identities = 65/139 (46%), Positives = 88/139 (63%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 504
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 505 RIRKLADQCTGLQGFLIFH 561
+RK A+ LQGF + H
Sbjct: 119 VVRKEAESTDCLQGFQLTH 137
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 136 bits (330), Expect = 1e-32
Identities = 65/139 (46%), Positives = 88/139 (63%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 504
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 505 RIRKLADQCTGLQGFLIFH 561
+RK A+ LQGF + H
Sbjct: 119 VVRKEAESTDCLQGFQLTH 137
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 134 bits (323), Expect = 1e-31
Identities = 64/139 (46%), Positives = 84/139 (60%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGK 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 504
+VPRA VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 505 RIRKLADQCTGLQGFLIFH 561
+RK A+ C LQGF + H
Sbjct: 119 VVRKEAESCDCLQGFQMTH 137
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 119 bits (286), Expect = 3e-27
Identities = 59/139 (42%), Positives = 83/139 (59%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 504
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 505 RIRKLADQCTGLQGFLIFH 561
IR+ A+ L+GF + H
Sbjct: 119 VIRREAEAADSLEGFQLIH 137
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 119 bits (286), Expect = 3e-27
Identities = 59/139 (42%), Positives = 83/139 (59%)
Frame = +1
Query: 145 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 324
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 325 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 504
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 505 RIRKLADQCTGLQGFLIFH 561
IR+ A+ L+GF + H
Sbjct: 119 VIRREAEAADSLEGFQLIH 137
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 74.5 bits (175), Expect = 8e-14
Identities = 45/138 (32%), Positives = 72/138 (52%), Gaps = 3/138 (2%)
Frame = +1
Query: 157 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 336
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 337 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 507
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 508 IRKLADQCTGLQGFLIFH 561
I + A+ L G L H
Sbjct: 124 IIREAENTNNLDGILFTH 141
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 74.5 bits (175), Expect = 8e-14
Identities = 45/138 (32%), Positives = 72/138 (52%), Gaps = 3/138 (2%)
Frame = +1
Query: 157 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 336
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 337 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 507
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 508 IRKLADQCTGLQGFLIFH 561
I + A+ L G L H
Sbjct: 124 IIREAENTNNLDGILFTH 141
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.58
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2
Query: 173 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAST 328
A P MP+ S + S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 187 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 366
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 367 VDE 375
DE
Sbjct: 116 ADE 118
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 187 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 366
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 81 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 133
Query: 367 VDE 375
DE
Sbjct: 134 ADE 136
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 187 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 366
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 367 VDE 375
DE
Sbjct: 116 ADE 118
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 435 FLTSNKLFWMKQLSVCASADLINNSRFKIDED 340
FL K F K ++VC S LI R+ DED
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDED 263
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 364 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 507
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 625 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 670
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 364 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 507
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 839 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 884
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 364 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 507
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 975 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1020
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 364 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 507
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 364 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 507
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 364 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 507
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1016 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1061
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 364 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 507
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1027 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1072
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 364 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 507
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1028 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1073
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,910,719
Number of Sequences: 27780
Number of extensions: 386474
Number of successful extensions: 938
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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