Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_E21
         (858 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81070-2|CAB03007.1|  491|Caenorhabditis elegans Hypothetical pr...    68   7e-12
Z92809-3|CAB07269.1|  440|Caenorhabditis elegans Hypothetical pr...    33   0.20 
Z81111-2|CAB03266.1|  535|Caenorhabditis elegans Hypothetical pr...    28   9.8  
AF040661-12|AAG24221.1|  210|Caenorhabditis elegans Hypothetical...    28   9.8  

>Z81070-2|CAB03007.1|  491|Caenorhabditis elegans Hypothetical
           protein F26E4.3 protein.
          Length = 491

 Score = 68.1 bits (159), Expect = 7e-12
 Identities = 30/55 (54%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
 Frame = +1

Query: 517 GRYCAARPDDNKCCYNRKDDCSVPILGT-LCYCDEFCDH-TRHHDDCCPDYKKVC 675
           G YC+ R   + CC NR DDC+VPILG  LCYCD FCD      +DCCPD++  C
Sbjct: 67  GDYCSVRT--HTCCENRDDDCTVPILGDHLCYCDMFCDRGPDGGNDCCPDFEATC 119



 Score = 30.3 bits (65), Expect = 1.8
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = +2

Query: 731 GRSSXKGCNLCTCXVXNDNNAYWSCTQXTCMMXXDLXNDV 850
           G +  K C  CTC     +N +W C    C++  D+   +
Sbjct: 139 GDTKEKNCEKCTC-----HNGFWKCDGTACLIQPDILEKI 173


>Z92809-3|CAB07269.1|  440|Caenorhabditis elegans Hypothetical
           protein R17.3 protein.
          Length = 440

 Score = 33.5 bits (73), Expect = 0.20
 Identities = 14/26 (53%), Positives = 14/26 (53%)
 Frame = +1

Query: 604 CYCDEFCDHTRHHDDCCPDYKKVCSP 681
           CYCDE C       DCC DY  VC P
Sbjct: 219 CYCDEHCVTL---GDCCSDYTFVCPP 241


>Z81111-2|CAB03266.1|  535|Caenorhabditis elegans Hypothetical
           protein T01G5.2 protein.
          Length = 535

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -3

Query: 667 SCNRDSSHRGVLCDHRTRRNSREYPISALSNRLFDCS 557
           + N  + HRG +C H+++  + E    A  + LFD S
Sbjct: 407 NANTLARHRGAICLHKSQMKNTEVLKKAFKSVLFDAS 443


>AF040661-12|AAG24221.1|  210|Caenorhabditis elegans Hypothetical
           protein W10G11.14 protein.
          Length = 210

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 487 LAYSGPELLNGRYCAARPDDNKCCYNRKDDCSVPILGTLC 606
           LA   P +LN +Y AA  DD  C    + D +  + G +C
Sbjct: 165 LASKTPTILNDQYFAATLDDTNCDGMLEGDAARVLRGYIC 204


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,959,094
Number of Sequences: 27780
Number of extensions: 365762
Number of successful extensions: 956
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)