Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_E21
         (858 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    24   2.1  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    23   4.8  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   6.3  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    22   8.3  

>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +1

Query: 484 CLAYSGPELLNGRYCAARPDDNKCC 558
           CL + GP ++N  +C   P  +  C
Sbjct: 45  CLPFCGPNVINPFFCDMSPSLSLLC 69


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 484 CLAYSGPELLNGRYCAARP 540
           CL + GP ++N  +C   P
Sbjct: 44  CLPFCGPNVINPFFCDMSP 62


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
 Frame = +1

Query: 526 CAARPDDNKCCYNRKDDCSVPILGTLCY-CDEFCD 627
           C    DD  C Y  K    VP  GT  Y C++ C+
Sbjct: 446 CCFAQDDGLCPYTLKHKIRVP-PGTPIYECNKRCN 479


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 6/21 (28%), Positives = 15/21 (71%)
 Frame = -1

Query: 687 LRWAAYFLVIGTAVIVVSCVI 625
           + W ++F+VI T +I++  ++
Sbjct: 408 IEWLSFFIVIFTYIIILITLV 428


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,301
Number of Sequences: 438
Number of extensions: 4747
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27673956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)