Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_E19
(860 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00003C0619 Cluster: PREDICTED: similar to CG14801-PB... 49 2e-04
UniRef50_Q16RI6 Cluster: Rnase h; n=2; Culicini|Rep: Rnase h - A... 49 2e-04
UniRef50_Q569U5 Cluster: LOC733188 protein; n=2; Xenopus|Rep: LO... 40 0.11
UniRef50_Q8IX06 Cluster: Exonuclease GOR; n=21; Homo/Pan/Gorilla... 40 0.11
UniRef50_Q8N1G1 Cluster: RNA exonuclease 1 homolog; n=39; cellul... 39 0.19
UniRef50_UPI00001E338C Cluster: PREDICTED: similar to REX1, RNA ... 37 0.57
UniRef50_A1L0Y1 Cluster: LOC100036702 protein; n=2; Xenopus trop... 37 0.57
UniRef50_Q4SF45 Cluster: Chromosome 1 SCAF14609, whole genome sh... 36 1.00
UniRef50_UPI0000F2CB48 Cluster: PREDICTED: similar to transcript... 36 1.7
UniRef50_UPI00005A2516 Cluster: PREDICTED: similar to transcript... 36 1.7
UniRef50_O17057 Cluster: Putative uncharacterized protein; n=4; ... 35 3.0
UniRef50_UPI000059FC83 Cluster: PREDICTED: hypothetical protein ... 34 5.3
UniRef50_O16669 Cluster: Putative uncharacterized protein; n=1; ... 34 5.3
UniRef50_Q1D9Q4 Cluster: Serine/threonine-protein kinase; n=1; M... 33 7.0
UniRef50_Q8I4C7 Cluster: Putative uncharacterized protein; n=3; ... 33 7.0
UniRef50_Q26649 Cluster: Myc protein; n=1; Strongylocentrotus pu... 33 9.3
UniRef50_Q5SZJ0 Cluster: Heparan sulfate proteoglycan 2; n=1; Ho... 33 9.3
>UniRef50_UPI00003C0619 Cluster: PREDICTED: similar to CG14801-PB,
isoform B; n=1; Apis mellifera|Rep: PREDICTED: similar
to CG14801-PB, isoform B - Apis mellifera
Length = 709
Score = 48.8 bits (111), Expect = 2e-04
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +2
Query: 497 EADAVEHLCVRCDKMFRMTR-DGEYVKEETCLYHWGRVSS 613
E A+E C RC K F + R DGEY+ EE C++HWG++ S
Sbjct: 449 ELMAIERKCARCHKSFYVNREDGEYLYEEKCVHHWGKLRS 488
>UniRef50_Q16RI6 Cluster: Rnase h; n=2; Culicini|Rep: Rnase h -
Aedes aegypti (Yellowfever mosquito)
Length = 254
Score = 48.8 bits (111), Expect = 2e-04
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +2
Query: 512 EHLCVRCDKMFRMTRDGEYVKEETCLYHWGRVS 610
E C RC K F +T DGEY+ +E C+YHWGR++
Sbjct: 8 ERECCRCGKGFFITLDGEYLTQEHCIYHWGRMT 40
Score = 36.7 bits (81), Expect = 0.75
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 624 YACCKSMLGSRGCXVXRSHVWSXYSFLGMNGPLXR-XRXRPXXLAGGXYAID 776
Y+CC +GC + + HVW+ G NGP + P G YA+D
Sbjct: 52 YSCCNGETDVKGCTINKLHVWTGL-LSGFNGPFDGFVKTEPSPRNEGVYALD 102
>UniRef50_Q569U5 Cluster: LOC733188 protein; n=2; Xenopus|Rep:
LOC733188 protein - Xenopus laevis (African clawed frog)
Length = 1143
Score = 39.5 bits (88), Expect = 0.11
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 482 SDSDEEADAVEHLCVRCDKMFRMTRDGEYVKEETCLYHWGRV 607
++ +D+ +C RC + ++ G V+ E C+YHWGR+
Sbjct: 882 TEEKRSSDSSCRVCCRCGAEYLVSTSGNCVRREECIYHWGRL 923
>UniRef50_Q8IX06 Cluster: Exonuclease GOR; n=21; Homo/Pan/Gorilla
group|Rep: Exonuclease GOR - Homo sapiens (Human)
Length = 318
Score = 39.5 bits (88), Expect = 0.11
Identities = 18/64 (28%), Positives = 32/64 (50%)
Frame = +2
Query: 422 NLFPGPKGDSGRGSLGSTPRSDSDEEADAVEHLCVRCDKMFRMTRDGEYVKEETCLYHWG 601
N +P P + G++ T + ++ +C RC + ++ G V+++ C YHWG
Sbjct: 26 NGYPFPHPERPGGAVLFTGQGKGPGDSSC--RVCCRCGTEYLVSSSGRCVRDQLCYYHWG 83
Query: 602 RVSS 613
RV S
Sbjct: 84 RVRS 87
>UniRef50_Q8N1G1 Cluster: RNA exonuclease 1 homolog; n=39; cellular
organisms|Rep: RNA exonuclease 1 homolog - Homo sapiens
(Human)
Length = 1221
Score = 38.7 bits (86), Expect = 0.19
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +2
Query: 422 NLFPGPKGDSGRGSLGSTPRSDSDEEADAVEHLCVRCDKMFRMTRDGEYVKEETCLYHWG 601
N +P P + G++ T ++ D+ C RC + ++ G +++E C YHWG
Sbjct: 942 NGYPFPHPERPGGAIIFT--AEEKRPKDSSCRTCCRCGTEYLVSSSGRCIRDEECYYHWG 999
Query: 602 RV 607
R+
Sbjct: 1000 RL 1001
>UniRef50_UPI00001E338C Cluster: PREDICTED: similar to REX1, RNA
exonuclease 1 homolog (S. cerevisiae); n=4; Murinae|Rep:
PREDICTED: similar to REX1, RNA exonuclease 1 homolog
(S. cerevisiae) - Mus musculus
Length = 624
Score = 37.1 bits (82), Expect = 0.57
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +2
Query: 458 GSLGSTPRSDSDEEADAVEHLCVRCDKMFRMTRDGEYVKEETCLYHWGRVSS 613
G GS ++ C RC + ++ G + E C+YHWGRV S
Sbjct: 298 GRPGSAVLFSGEQLLSPTHRACCRCGTKYLVSFSGRCLCSEPCVYHWGRVVS 349
>UniRef50_A1L0Y1 Cluster: LOC100036702 protein; n=2; Xenopus
tropicalis|Rep: LOC100036702 protein - Xenopus
tropicalis (Western clawed frog) (Silurana tropicalis)
Length = 1026
Score = 37.1 bits (82), Expect = 0.57
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 503 DAVEHLCVRCDKMFRMTRDGEYVKEETCLYHWGRV 607
D + +C RC + + +T G++ ++E C YH G+V
Sbjct: 772 DVLRRVCCRCGETYSITMQGKHTRKEECNYHSGKV 806
>UniRef50_Q4SF45 Cluster: Chromosome 1 SCAF14609, whole genome shotgun
sequence; n=2; Tetraodontidae|Rep: Chromosome 1
SCAF14609, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1342
Score = 36.3 bits (80), Expect = 1.00
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 506 AVEHLCVRCDKMFRMTRDGEYVKEETCLYHWGRV 607
A +C RC +++ +G V++E C +HWG++
Sbjct: 1058 AFSKICCRCGAEYKVNANGNCVRKEECSFHWGQL 1091
>UniRef50_UPI0000F2CB48 Cluster: PREDICTED: similar to transcription
elongation factor B polypeptide 3 binding protein 1; n=2;
Amniota|Rep: PREDICTED: similar to transcription
elongation factor B polypeptide 3 binding protein 1 -
Monodelphis domestica
Length = 1259
Score = 35.5 bits (78), Expect = 1.7
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +2
Query: 482 SDSDEEADAVEHLCVRCDKMFRMTRDGEYVKEETCLYHWGRV 607
++ + D+ +C RC + ++ G +++E C +HWGR+
Sbjct: 998 TEEKKTTDSSCRICCRCGTEYLVSPTGNCIRKEECCHHWGRL 1039
>UniRef50_UPI00005A2516 Cluster: PREDICTED: similar to transcription
elongation factor B polypeptide 3 binding protein 1
isoform 1; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to transcription elongation factor B polypeptide
3 binding protein 1 isoform 1 - Canis familiaris
Length = 795
Score = 35.5 bits (78), Expect = 1.7
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 518 LCVRCDKMFRMTRDGEYVKEETCLYHWGRVSS 613
+C RC K++ +T G++ + E C YH+G V S
Sbjct: 554 ICCRCGKIYGVTSTGKHCRVEECNYHFGPVLS 585
>UniRef50_O17057 Cluster: Putative uncharacterized protein; n=4;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 420
Score = 34.7 bits (76), Expect = 3.0
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +3
Query: 330 EIEPNS--TKAVVYINPPPRPRPMTTWDVNAPEICSRVPRVTAVAGPWGQ 473
E P+S T+ + PPPRPRP T V P + ++P T+ PW Q
Sbjct: 134 ETSPSSSTTRRHAFAPPPPRPRPPT---VPLPTVTQQIPWQTSTIWPWIQ 180
>UniRef50_UPI000059FC83 Cluster: PREDICTED: hypothetical protein
XP_863669; n=1; Canis lupus familiaris|Rep: PREDICTED:
hypothetical protein XP_863669 - Canis familiaris
Length = 446
Score = 33.9 bits (74), Expect = 5.3
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 336 EPNSTKAVVYINPPPRPRPMTTWDVNAP-EICSRVPRVTAVAGPWGQ 473
+P + A PP PRP T W + P E R+PR T A G+
Sbjct: 259 QPRALAAGAPSRTPPPPRPRTAWSRHRPEERAPRLPRATTAAAARGE 305
>UniRef50_O16669 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 598
Score = 33.9 bits (74), Expect = 5.3
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -1
Query: 476 ELTPRTRDRCHPWDPGTNFRGIYIPRSHR 390
++T + +D HPWDPGT R I P++ R
Sbjct: 490 KITTQWQDDKHPWDPGTQQRDIQSPQTQR 518
>UniRef50_Q1D9Q4 Cluster: Serine/threonine-protein kinase; n=1;
Myxococcus xanthus DK 1622|Rep: Serine/threonine-protein
kinase - Myxococcus xanthus (strain DK 1622)
Length = 687
Score = 33.5 bits (73), Expect = 7.0
Identities = 19/43 (44%), Positives = 23/43 (53%)
Frame = +3
Query: 336 EPNSTKAVVYINPPPRPRPMTTWDVNAPEICSRVPRVTAVAGP 464
EP+ AV+ +NP PR P+ D NAP S P V AV P
Sbjct: 345 EPSEVAAVLPLNPEPRDVPV--ADANAPVTPSEPPGVPAVEAP 385
>UniRef50_Q8I4C7 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 490
Score = 33.5 bits (73), Expect = 7.0
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +3
Query: 291 LSPKRMWTLGYPLEIEPNSTKAVVYINPPPRP--RPMTTWDVNA 416
L K + YPLE++ KA VYI P+ P TWD++A
Sbjct: 246 LKVKAAYNKEYPLEMQVQGAKAQVYIATSPKELNNPRRTWDLDA 289
>UniRef50_Q26649 Cluster: Myc protein; n=1; Strongylocentrotus
purpuratus|Rep: Myc protein - Strongylocentrotus
purpuratus (Purple sea urchin)
Length = 433
Score = 33.1 bits (72), Expect = 9.3
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Frame = +2
Query: 353 SGRI--HKSTAST*TDDYVGCKC--P*NLFPGPKGDSGRGSLGSTPRSDSDEEADAV 511
+GR+ H S A + D+ +C P ++FP P D+ R ST SDS+EE D V
Sbjct: 163 NGRLTAHSSVAGGVSGDFSSSECVDPTSVFPYPLSDT-RLDFSSTTPSDSEEEIDVV 218
>UniRef50_Q5SZJ0 Cluster: Heparan sulfate proteoglycan 2; n=1; Homo
sapiens|Rep: Heparan sulfate proteoglycan 2 - Homo
sapiens (Human)
Length = 93
Score = 33.1 bits (72), Expect = 9.3
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +3
Query: 288 FLSPKRMWTLGYPLEIEPNSTKAVVYINPPPR---PRPMTTWDVNAPEICSRVPRVTAVA 458
FL + T L ++P T+A P R PRP+ + PE+ +PR +
Sbjct: 16 FLGGRPPGTSCCTLSVQPLRTQAATAAGSPTRWAQPRPLPSCSSKNPELGPELPRDVYMP 75
Query: 459 GPW 467
GPW
Sbjct: 76 GPW 78
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 769,819,586
Number of Sequences: 1657284
Number of extensions: 15670227
Number of successful extensions: 42380
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 40200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42326
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76243001646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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