Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_E19
         (860 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     23   3.1  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   3.1  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   3.1  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   3.1  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   5.4  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   9.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.5  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 443 GDSGRGSLGSTPRSDSDEE 499
           GD G+GS  +    D DEE
Sbjct: 186 GDDGQGSSTNNDEDDDDEE 204


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 443 GDSGRGSLGSTPRSDSDEE 499
           GD G+GS  +    D DEE
Sbjct: 186 GDDGQGSSTNNDEDDDDEE 204


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/28 (28%), Positives = 19/28 (67%)
 Frame = +3

Query: 519 CVYVVIKCLE*LVMVNTLKKKHASIIGA 602
           CV  ++   E L ++N +KK+++++I +
Sbjct: 347 CVNTLVSEQEGLQLINEMKKRYSALINS 374


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 443 GDSGRGSLGSTPRSDSDEE 499
           GD G+GS  +    D DEE
Sbjct: 186 GDDGQGSSTNNDEDDDDEE 204


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 536 KMFRMTRDGEYVKEETCLY 592
           K+  M+RD  Y+   TCL+
Sbjct: 487 KVLAMSRDQNYLYRMTCLF 505


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +3

Query: 357 VVYINPPPRPRPMTTWD 407
           +  + PPP+P P  T++
Sbjct: 171 IACMGPPPQPEPPVTFN 187



 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 157 WTLPALQHAGASRV 198
           ++LP + HA ASRV
Sbjct: 479 YSLPMVNHAAASRV 492


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 6/30 (20%), Positives = 17/30 (56%)
 Frame = -2

Query: 580  FFFNVFTITSHSKHFITTYTQVFHSIRFFV 491
            ++  +FTI + +  F+T +  +   + +F+
Sbjct: 1218 YYATIFTIITATSSFVTIHNVIGQFLGYFI 1247


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,366
Number of Sequences: 336
Number of extensions: 3853
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)