Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_E19
         (860 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_02_0040 - 7665220-7666656                                           31   1.2  
07_03_1316 + 25736931-25737206,25737276-25737329,25738036-257381...    31   1.6  
05_01_0251 + 1901709-1901864,1901968-1901999,1902534-1902664,190...    30   2.1  

>11_02_0040 - 7665220-7666656
          Length = 478

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 6/30 (20%)
 Frame = +3

Query: 339 PNSTKAVVY---INPPPRPR---PMTTWDV 410
           P+ST  VV    + PPPRPR   P+T+WDV
Sbjct: 2   PSSTVRVVSTRTVKPPPRPRERIPLTSWDV 31


>07_03_1316 +
           25736931-25737206,25737276-25737329,25738036-25738189,
           25740235-25740313,25740413-25740492,25740588-25740654,
           25741548-25741619,25742071-25742223,25742309-25742392,
           25742811-25742877
          Length = 361

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = -1

Query: 485 QIAELTPRTRDRCHPWDPGTNFRGIYIPRSHRSRSRRWIYVYDRFSRIRF 336
           +I E  PR+R R     P   +R  Y  R +R RSR      DR+ R R+
Sbjct: 241 KIMETVPRSRGRSRSRSPRRGYRDDYRERDYRKRSRS----RDRYGRDRY 286


>05_01_0251 + 1901709-1901864,1901968-1901999,1902534-1902664,
            1902740-1902821,1902928-1903054,1903369-1903686,
            1903785-1903846,1903988-1904074,1904139-1904195,
            1906113-1906197,1906916-1907185,1908158-1908254,
            1908390-1908436,1908826-1908939,1909024-1909117,
            1909360-1909457,1910356-1910455,1911445-1911521,
            1911824-1913122
          Length = 1110

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 21/77 (27%), Positives = 36/77 (46%)
 Frame = -1

Query: 500  LLRHCQIAELTPRTRDRCHPWDPGTNFRGIYIPRSHRSRSRRWIYVYDRFSRIRFNFQRI 321
            ++  C++A L     DR  P DP    R +  PR H +     +   DR   +R++FQ  
Sbjct: 898  IMHQCKLANLIWVGPDRLSPLDPQQVERILGYPRKHTNLF--GLNPQDRIEAMRYSFQTD 955

Query: 320  SQGPHALWRQEM*PEGL 270
            + G      +++ P+GL
Sbjct: 956  TLGYLLSVLKDLYPDGL 972


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,656,830
Number of Sequences: 37544
Number of extensions: 467731
Number of successful extensions: 1361
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1361
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)