Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_E19
         (860 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF024491-4|AAZ82855.1|  365|Caenorhabditis elegans Hypothetical ...    35   0.086
AF024491-3|AAB70311.2|  420|Caenorhabditis elegans Hypothetical ...    35   0.086
AF016676-1|AAG24103.1|  598|Caenorhabditis elegans Hypothetical ...    34   0.15 
AL021497-10|CAD56614.1|  490|Caenorhabditis elegans Hypothetical...    33   0.20 
AL021497-9|CAA16397.1|  487|Caenorhabditis elegans Hypothetical ...    33   0.20 
Z75543-2|CAA99870.1|  529|Caenorhabditis elegans Hypothetical pr...    30   1.8  
AL110500-13|CAB54495.1|  791|Caenorhabditis elegans Hypothetical...    30   1.8  
Z72506-7|CAA96620.2|  293|Caenorhabditis elegans Hypothetical pr...    28   9.8  

>AF024491-4|AAZ82855.1|  365|Caenorhabditis elegans Hypothetical
           protein C24A1.2b protein.
          Length = 365

 Score = 34.7 bits (76), Expect = 0.086
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +3

Query: 330 EIEPNS--TKAVVYINPPPRPRPMTTWDVNAPEICSRVPRVTAVAGPWGQ 473
           E  P+S  T+   +  PPPRPRP T   V  P +  ++P  T+   PW Q
Sbjct: 79  ETSPSSSTTRRHAFAPPPPRPRPPT---VPLPTVTQQIPWQTSTIWPWIQ 125


>AF024491-3|AAB70311.2|  420|Caenorhabditis elegans Hypothetical
           protein C24A1.2a protein.
          Length = 420

 Score = 34.7 bits (76), Expect = 0.086
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +3

Query: 330 EIEPNS--TKAVVYINPPPRPRPMTTWDVNAPEICSRVPRVTAVAGPWGQ 473
           E  P+S  T+   +  PPPRPRP T   V  P +  ++P  T+   PW Q
Sbjct: 134 ETSPSSSTTRRHAFAPPPPRPRPPT---VPLPTVTQQIPWQTSTIWPWIQ 180


>AF016676-1|AAG24103.1|  598|Caenorhabditis elegans Hypothetical
           protein F41B5.6 protein.
          Length = 598

 Score = 33.9 bits (74), Expect = 0.15
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -1

Query: 476 ELTPRTRDRCHPWDPGTNFRGIYIPRSHR 390
           ++T + +D  HPWDPGT  R I  P++ R
Sbjct: 490 KITTQWQDDKHPWDPGTQQRDIQSPQTQR 518


>AL021497-10|CAD56614.1|  490|Caenorhabditis elegans Hypothetical
           protein Y51A2D.13b protein.
          Length = 490

 Score = 33.5 bits (73), Expect = 0.20
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +3

Query: 291 LSPKRMWTLGYPLEIEPNSTKAVVYINPPPRP--RPMTTWDVNA 416
           L  K  +   YPLE++    KA VYI   P+    P  TWD++A
Sbjct: 246 LKVKAAYNKEYPLEMQVQGAKAQVYIATSPKELNNPRRTWDLDA 289


>AL021497-9|CAA16397.1|  487|Caenorhabditis elegans Hypothetical
           protein Y51A2D.13a protein.
          Length = 487

 Score = 33.5 bits (73), Expect = 0.20
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +3

Query: 291 LSPKRMWTLGYPLEIEPNSTKAVVYINPPPRP--RPMTTWDVNA 416
           L  K  +   YPLE++    KA VYI   P+    P  TWD++A
Sbjct: 243 LKVKAAYNKEYPLEMQVQGAKAQVYIATSPKELNNPRRTWDLDA 286


>Z75543-2|CAA99870.1|  529|Caenorhabditis elegans Hypothetical
           protein K01D12.2 protein.
          Length = 529

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 476 ELTPRTRDRCHPWDPGTNFRGIYIPRS 396
           ++T + +D  HPWDPGT  R    PR+
Sbjct: 502 KITTQWQDDKHPWDPGTQQRYQLAPRT 528


>AL110500-13|CAB54495.1|  791|Caenorhabditis elegans Hypothetical
           protein Y87G2A.12 protein.
          Length = 791

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 476 ELTPRTRDRCHPWDPGTNFRGIYIPRS 396
           ++T + +D  HPWDPGT  R    PR+
Sbjct: 666 KITTQWQDDKHPWDPGTQQRYQLAPRT 692


>Z72506-7|CAA96620.2|  293|Caenorhabditis elegans Hypothetical
           protein F07A5.6 protein.
          Length = 293

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +3

Query: 360 VYINPPPRPRPMTTWDVNAPEI 425
           + I PPP+PR M+ + V++P I
Sbjct: 162 ILIAPPPQPRRMSKFSVHSPSI 183


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,557,311
Number of Sequences: 27780
Number of extensions: 373425
Number of successful extensions: 1200
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)