Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_E16
(857 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1355 + 36610390-36610479,36611906-36612063,36612144-366125... 34 0.13
01_06_0795 - 32051794-32053362,32053452-32053595,32054102-320549... 32 0.67
07_03_0439 + 18212584-18213065,18214164-18215010 31 1.6
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 31 1.6
08_02_0819 - 21529913-21530064,21531016-21531082,21531284-215313... 29 3.6
12_02_0589 + 20850249-20850491,20850583-20851839 29 4.7
04_04_1499 - 34006999-34007232,34007371-34007440,34007580-340076... 29 4.7
11_01_0113 + 881806-881996,882831-882921,883140-883255,884489-88... 29 6.3
02_02_0183 + 7576901-7576908,7577666-7578176 29 6.3
12_01_0357 + 2720860-2721066,2721169-2721384,2721481-2723608,272... 28 8.3
09_06_0280 + 22010270-22011407,22011890-22013097 28 8.3
05_03_0031 - 7534327-7534480,7535546-7535649,7535724-7535793,753... 28 8.3
04_03_0362 + 14934236-14934541,14935549-14935647,14935736-149357... 28 8.3
03_06_0648 + 35280492-35280645,35281742-35281820,35282491-352825... 28 8.3
03_02_1009 + 13189349-13189592,13189782-13189882,13191085-131910... 28 8.3
>01_06_1355 +
36610390-36610479,36611906-36612063,36612144-36612523,
36612600-36613583,36614228-36614292,36614946-36615024,
36615480-36615529,36616595-36616781,36617922-36617957,
36619226-36619348,36619466-36620386,36620506-36620636
Length = 1067
Score = 34.3 bits (75), Expect = 0.13
Identities = 25/72 (34%), Positives = 34/72 (47%)
Frame = +2
Query: 566 QPSRSSPKIAVNITSVSRALPASTVAPSEPFSRSXXADGTGXCXXPXXVPGCEDYYGRXG 745
Q +RS+P + N+ +VS ALP +TV+ E R+ ADG P P DY R
Sbjct: 383 QCNRSAPVVLANMNNVSFALP-NTVSMLEALYRN-TADGVYTRDFPDQPPVAFDYTSRGL 440
Query: 746 FEGDPQXXSSSP 781
P + SP
Sbjct: 441 LGNSPLASTGSP 452
>01_06_0795 -
32051794-32053362,32053452-32053595,32054102-32054965,
32055335-32055892
Length = 1044
Score = 31.9 bits (69), Expect = 0.67
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 35 TLVPGLSSQYEFEVFISVSGRPR--RSCGPRVLQMPRRLRFLPSPHLL 172
TL+ L+S F+ ++GR C PR + PR L +L SPH+L
Sbjct: 324 TLLRNLTSNLTFQEAYDMTGRILVVTVCSPRKHEPPRCLNYLTSPHVL 371
>07_03_0439 + 18212584-18213065,18214164-18215010
Length = 442
Score = 30.7 bits (66), Expect = 1.6
Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Frame = +1
Query: 292 LSAERGHSLSPQSPLLTVR-DCTASSLMKTSATFSGT---AGTEKPPAISAAPDLPTTES 459
L+A H + P SP ++ D + +A S T A + PP+ ++A L T
Sbjct: 15 LAATSWHCVHPPSPTVSTHWDAASHEARGAAAASSPTSPRAASTNPPSATSAEPLHTCVF 74
Query: 460 PASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLAR 564
S G R + Q A+P + +P LAR
Sbjct: 75 SGSVAGPSRQAALSYLTTQPSRMARPLLAAPHLAR 109
>02_02_0095 +
6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +3
Query: 489 PECK-NEEVANGFGCPAPGEVSNAGSFSRHAHPRRLP*TLHLSRGRCPRVRLPHRN 653
PEC+ N + +G+ C AP ++S R P R P HL R P R+
Sbjct: 460 PECQTNARLRSGWICSAPSDLSQGLLIGRPRSPARNPRRDHLKSSEWELRRRPRRD 515
>08_02_0819 -
21529913-21530064,21531016-21531082,21531284-21531373,
21531506-21531622,21532026-21532145,21532313-21533581
Length = 604
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +1
Query: 307 GHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPAS 468
G + +PQ+ +VR CT+ SL + SA GTA T + A SA +T S +S
Sbjct: 47 GGTPAPQAAASSVRRCTSPSLSRASAA-EGTASTNR--AQSAERRRSSTPSSSS 97
>12_02_0589 + 20850249-20850491,20850583-20851839
Length = 499
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -3
Query: 315 AVSSLRTQRCEGSRSSRSSIWNLWRRKRDRCRRFSVRLHRCRTSSI 178
A SSL T S S R ++ +WR+ R+ R+FS ++C +S+
Sbjct: 270 AYSSLLT--LYASLSDRGNLDRVWRKMRETFRKFSDTEYKCMLTSL 313
>04_04_1499 -
34006999-34007232,34007371-34007440,34007580-34007637,
34007940-34007979,34008183-34008259,34008366-34008582,
34008703-34009266
Length = 419
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 294 ECGERTQLEPPISTPHCSRLYGIF 365
+ GERT L PP H R++G+F
Sbjct: 144 DSGERTPLPPPSQQQHQDRIHGLF 167
>11_01_0113 +
881806-881996,882831-882921,883140-883255,884489-885260
Length = 389
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 300 RTQRCEGSRSSRSSIWNLWRRKRDR 226
R RC G ++RS+ LWRR+R R
Sbjct: 20 RVSRCSGRPATRSAPSILWRRRRPR 44
>02_02_0183 + 7576901-7576908,7577666-7578176
Length = 172
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 324 GAQAVSSLRTQRCEGSRSSRSSIWNLWRRKRDRCRR 217
G V + +R EG S + W WRR+R RC R
Sbjct: 108 GGGGVGWMGMRRAEGGGSGSVARWRRWRRRR-RCGR 142
>12_01_0357 +
2720860-2721066,2721169-2721384,2721481-2723608,
2723699-2724124,2724242-2724546,2724660-2724823,
2724899-2724980
Length = 1175
Score = 28.3 bits (60), Expect = 8.3
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +1
Query: 355 TASSLMKTSATFSGT-AGTEKPPAI-SAAPDLPTTESPASACGLIRFRSAKTKK*QTDSA 528
T SS+M++SAT GT A + P A+ SA P P T +P + R+ SA
Sbjct: 152 TDSSMMQSSAT--GTQAAVQGPSAVASAVPMTPVTAAPTTVPSTTTARAGTDSAIAVASA 209
Query: 529 AQPPVRSPTLARS 567
V + +A S
Sbjct: 210 GSTTVSTVAVAPS 222
>09_06_0280 + 22010270-22011407,22011890-22013097
Length = 781
Score = 28.3 bits (60), Expect = 8.3
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +3
Query: 501 NEEVANGFGCPAPGEVSNAGSFSRHAH 581
N + AN + CP PGE + S +++
Sbjct: 275 NNQAANNWSCPTPGEARRSACISNNSY 301
>05_03_0031 -
7534327-7534480,7535546-7535649,7535724-7535793,
7535889-7535932,7536042-7536146,7536223-7536344,
7536807-7536894,7536966-7537052,7537718-7537786,
7537859-7538188,7539777-7539824,7540003-7540069,
7540150-7540208,7541220-7541453,7541536-7541601,
7541684-7541883,7542104-7542197,7542295-7542414,
7542596-7542703,7542808-7542871,7543378-7543409,
7546049-7548007
Length = 1407
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = -3
Query: 687 PVPSAXXDLENGSDGATVLAGNALETDVMFTAIFGDERDG*TSQRWRP 544
P P+A G DGA G + D ++TA+FG + W P
Sbjct: 94 PPPAADEGSPGGDDGAEDAGGFSAGLDSLWTALFGSPEE--LEPMWSP 139
>04_03_0362 +
14934236-14934541,14935549-14935647,14935736-14935798,
14935878-14935940,14937242-14937362,14937472-14937872,
14937968-14938141,14938252-14938570,14938659-14938735,
14938808-14938877,14938951-14939007,14939100-14939314,
14939436-14939561,14939649-14939944,14940032-14940203,
14940300-14940398,14940471-14940602,14940692-14940792,
14941391-14941580,14941819-14941842
Length = 1034
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +3
Query: 399 CWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNEEVANGFGCPAPGEVSNAGSFSRH 575
CW G + RY+CSP VCM ++P + + P EV + G H
Sbjct: 77 CWRGLSRRYKCSPERTV---LSVCMLTGEMPRVQTSRLGKN-----PIEVDSDGGEDLH 127
>03_06_0648 +
35280492-35280645,35281742-35281820,35282491-35282593,
35282695-35282815,35283144-35283232,35283324-35283473,
35285842-35287161
Length = 671
Score = 28.3 bits (60), Expect = 8.3
Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Frame = +1
Query: 229 VSLSTPQIPNXXXXXXXXXXXLSAERGHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGT 408
+ S+P +PN AER +LS Q+P+++ + S M S G
Sbjct: 290 IGRSSPSVPNPPLGPR------GAERSSNLSSQTPVISSSGLSYGSGMHVGNANSRVNGN 343
Query: 409 EKPPAISAAP---DLPTTE 456
P + P D+P TE
Sbjct: 344 SVQPTVELLPSFKDVPNTE 362
>03_02_1009 +
13189349-13189592,13189782-13189882,13191085-13191090,
13191712-13191933,13192052-13192137,13192330-13192426,
13192817-13192909,13193031-13193186
Length = 334
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +1
Query: 292 LSAERGHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDL 444
L RG SP P T+S SAT +GT G + PP + + PD+
Sbjct: 33 LGLSRGAGPSPPPP---PSSSTSSFPAAASATAAGTGG-DAPPIVGSCPDM 79
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,451,646
Number of Sequences: 37544
Number of extensions: 516955
Number of successful extensions: 1846
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1845
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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