BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_E16 (857 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 6e-08 SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16) 38 0.014 SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.024 SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09) 36 0.032 SB_26497| Best HMM Match : DUF963 (HMM E-Value=0.24) 36 0.056 SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15) 36 0.056 SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17) 35 0.074 SB_11987| Best HMM Match : OTU (HMM E-Value=1.1e-24) 35 0.097 SB_52309| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52 SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14) 32 0.69 SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10) 32 0.69 SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.69 SB_55307| Best HMM Match : HEAT (HMM E-Value=2.4e-11) 32 0.69 SB_5780| Best HMM Match : EGF_CA (HMM E-Value=0) 31 0.91 SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.91 SB_2198| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.91 SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18) 31 1.2 SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2 SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29) 31 1.6 SB_44060| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10) 30 2.1 SB_43856| Best HMM Match : Laminin_I (HMM E-Value=0.057) 30 2.1 SB_17775| Best HMM Match : Coiled (HMM E-Value=2.3) 29 3.7 SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8 SB_12832| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8 SB_54736| Best HMM Match : TF_Otx (HMM E-Value=1.7) 29 4.8 SB_3108| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8 SB_53136| Best HMM Match : RVT_1 (HMM E-Value=4.6e-28) 29 6.4 SB_53929| Best HMM Match : Amelogenin (HMM E-Value=3.6) 29 6.4 SB_25689| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4 SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69) 29 6.4 SB_1701| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4 SB_40091| Best HMM Match : CNH (HMM E-Value=8.5e-07) 28 8.5 SB_13351| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5 SB_11034| Best HMM Match : Securin (HMM E-Value=6.8) 28 8.5 >SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1671 Score = 55.2 bits (127), Expect = 6e-08 Identities = 38/124 (30%), Positives = 51/124 (41%), Gaps = 10/124 (8%) Frame = +3 Query: 147 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGER---TQL 317 G Y +C+ + C N + C L F+ T T++CD NV+CG T Sbjct: 449 GDYQDPDACEGFISCSNHITYHMPCPENLRFNPT-----TKHCDNPENVQCGPTRPPTPK 503 Query: 318 EPPIS------TPHC-SRLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMW 476 PP + +P C + G + D N C+ F C NG C L YD C W Sbjct: 504 VPPTTKAPFTKSPFCVGKQNGKYADANNCNGFVMCSNGYIYYMDCPSNLRYDPAKGRCEW 563 Query: 477 ADQV 488 AD V Sbjct: 564 ADTV 567 Score = 53.2 bits (122), Expect = 3e-07 Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 14/133 (10%) Frame = +3 Query: 147 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQLEP- 323 G Y +C+ + C NG C + L +D + C++ V+CG+R + P Sbjct: 524 GKYADANNCNGFVMCSNGYIYYMDCPSNLRYDPAKGR-----CEWADTVDCGQRPTISPH 578 Query: 324 ------------PISTPHCS-RLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESR 464 P +P C + G + D + C+ F C NG A + C L +D + Sbjct: 579 PPKPTTMPPQPTPPKSPFCEEKKNGDYADPSNCNGFITCSNGYAYKRDCPFNLKFDTKKL 638 Query: 465 VCMWADQVPECKN 503 C W ++V CK+ Sbjct: 639 ECEWPNKV-NCKS 650 Score = 37.1 bits (82), Expect = 0.018 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 4/81 (4%) Frame = +3 Query: 294 ECGERTQLE--PPISTPHCS-RLYGIFPDENKCDVFWNCWNG-EASRYQCSPGLAYDRES 461 +C R QL P + + C+ R G + D + C+++ C NG + C GLA++ Sbjct: 298 KCYIRKQLPNLPLVDSNFCTERQDGNYADSSNCNLYITCSNGFTIANRHCPTGLAFNEAI 357 Query: 462 RVCMWADQVPECKNEEVANGF 524 +C + VP C +GF Sbjct: 358 GMCDYPSNVPGCSGSS-GSGF 377 >SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16) Length = 518 Score = 37.5 bits (83), Expect = 0.014 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = +3 Query: 357 GIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQV 488 GI+ ++ C F C G A + C PGL ++ + VC W+ +V Sbjct: 464 GIYAEKENCYGFVLCGGGIAHKKTCPPGLIFNTDLMVCDWSHEV 507 Score = 35.1 bits (77), Expect = 0.074 Identities = 19/51 (37%), Positives = 25/51 (49%) Frame = +3 Query: 147 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVEC 299 G Y +C + C G+A KTC GL F+ TD CD+ H V+C Sbjct: 464 GIYAEKENCYGFVLCGGGIAHKKTCPPGLIFN-TDLMV----CDWSHEVKC 509 >SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1831 Score = 36.7 bits (81), Expect = 0.024 Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 2/103 (1%) Frame = +3 Query: 36 LSCQDLVRNMNSRCXXXXXXXXXXXXXQESFKCPDD-FGFYPHHISCDKYWKCDN-GVAE 209 L CQ L N + C ++ C D G+Y C ++++CD A Sbjct: 753 LHCQTL--NPDGSCTVVQNFAVVNAMCVDTTFCKDKPNGYYADPRDCSRFYQCDAFHRAF 810 Query: 210 LKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQLEPPISTP 338 L C GL + T + CD+ NV+C +T PP TP Sbjct: 811 LHRCSPGLKWSITKT-----TCDWPRNVDCDRKTP-TPPSPTP 847 Score = 31.5 bits (68), Expect = 0.91 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%) Frame = +3 Query: 147 GFYPHHISCDKYWKCDNGVAE--LKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQLE 320 G+Y C +++ C G AE L C GL + + + CDY H V+C T Sbjct: 574 GYYADPKDCAQFYFC-YGSAESLLSRCPRGLLWSV-----VKKTCDYPHLVDCSRPT--T 625 Query: 321 PPIST 335 PP++T Sbjct: 626 PPVTT 630 Score = 29.5 bits (63), Expect = 3.7 Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Frame = +3 Query: 327 ISTPHCS-RLYGIFPDENKCDVFWNCWN-GEASRYQCSPGLAYDRESRVCMWADQV 488 + T C + G + D C F+ C A ++CSPGL + C W V Sbjct: 778 VDTTFCKDKPNGYYADPRDCSRFYQCDAFHRAFLHRCSPGLKWSITKTTCDWPRNV 833 >SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09) Length = 98 Score = 36.3 bits (80), Expect = 0.032 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Frame = +3 Query: 327 ISTPHCS-RLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQ 485 +S+ C + G++ DE F C+NG +C+ GL ++ + ++C DQ Sbjct: 2 LSSNFCKVKTSGVYADEKNPSKFVICYNGVREERECAKGLVFNPKEKICEQPDQ 55 >SB_26497| Best HMM Match : DUF963 (HMM E-Value=0.24) Length = 889 Score = 35.5 bits (78), Expect = 0.056 Identities = 23/88 (26%), Positives = 40/88 (45%) Frame = +1 Query: 313 SLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFR 492 S++P S + + C + TS+ S AGT++PP + AP P ++ G F Sbjct: 378 SVAPTSLFGSAKSCAPETKTTTSSN-SLLAGTQQPPTTTTAPVFGQPGKPVASLGTGLFG 436 Query: 493 SAKTKK*QTDSAAQPPVRSPTLARSAVT 576 A+T + T + + + A S+ T Sbjct: 437 QAETAETSTTAVSTQSISQAVSAPSSST 464 >SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15) Length = 134 Score = 35.5 bits (78), Expect = 0.056 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = +3 Query: 366 PDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMW 476 PD C +++C G+A R C PG +D C W Sbjct: 32 PDSTSCQHYYHCTWGKAVRKDCGPGRVWDPRITNCNW 68 Score = 29.1 bits (62), Expect = 4.8 Identities = 12/31 (38%), Positives = 15/31 (48%) Frame = +3 Query: 150 FYPHHISCDKYWKCDNGVAELKTCGNGLAFD 242 + P SC Y+ C G A K CG G +D Sbjct: 30 YLPDSTSCQHYYHCTWGKAVRKDCGPGRVWD 60 >SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17) Length = 225 Score = 35.1 bits (77), Expect = 0.074 Identities = 17/55 (30%), Positives = 26/55 (47%) Frame = +3 Query: 327 ISTPHCSRLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVP 491 +ST +R G +P + C ++ C NG A C GL ++ E + C W P Sbjct: 82 LSTICKNRADGNYPHPDFCKMYIACSNGIAYEMPCPAGLNWNDEKKYCDWPFNAP 136 Score = 34.7 bits (76), Expect = 0.097 Identities = 19/51 (37%), Positives = 24/51 (47%) Frame = +3 Query: 147 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVEC 299 G YPH C Y C NG+A C GL ++ + KY CD+ N C Sbjct: 92 GNYPHPDFCKMYIACSNGIAYEMPCPAGLNWN-DEKKY----CDWPFNAPC 137 >SB_11987| Best HMM Match : OTU (HMM E-Value=1.1e-24) Length = 1142 Score = 34.7 bits (76), Expect = 0.097 Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 5/66 (7%) Frame = +1 Query: 409 EKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSA---AQP--PVRSPTLARSAV 573 E P + AP + + P+ A R ++AKT+ QTDS+ ++P PV SPT + + Sbjct: 472 EVPVQLEQAPSVEAGQEPSPAEFWSRLKNAKTQSKQTDSSPSTSKPATPVTSPTEGKQSH 531 Query: 574 TLIPED 591 + +P D Sbjct: 532 SQLPAD 537 >SB_52309| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 386 Score = 32.3 bits (70), Expect = 0.52 Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 3/108 (2%) Frame = +3 Query: 168 SCDKYWKCDNGVAELKT-CGNGLAFDATDSKYLTENCDYLHNVECGERTQLEPPISTPHC 344 +CDK KC+N + C G + + + + E C N C + + I + HC Sbjct: 107 TCDKNAKCNNTIGSYHCMCNPGFSGNGRNCTDIDE-C-VTGNHACDKNARCRNNIGSHHC 164 Query: 345 SRLYGIFPDENKCDVFWNCWNGEASRYQCSP-GLAYDR-ESRVCMWAD 482 + G + + CD C +AS ++CSP + Y+ S VC D Sbjct: 165 TCKSGFYGNGASCDDIDEC--RDAS-HKCSPHAICYNTLGSFVCSCKD 209 >SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14) Length = 480 Score = 31.9 bits (69), Expect = 0.69 Identities = 16/44 (36%), Positives = 21/44 (47%) Frame = +3 Query: 147 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCD 278 G Y H CD Y C NG+A C GL ++ +T+ CD Sbjct: 342 GNYAHPSKCDMYITCSNGIAHEMPCPAGLNWND-----VTKECD 380 Score = 30.3 bits (65), Expect = 2.1 Identities = 12/38 (31%), Positives = 20/38 (52%) Frame = +3 Query: 357 GIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVC 470 G + +KCD++ C NG A C GL ++ ++ C Sbjct: 342 GNYAHPSKCDMYITCSNGIAHEMPCPAGLNWNDVTKEC 379 >SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10) Length = 155 Score = 31.9 bits (69), Expect = 0.69 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 1/84 (1%) Frame = +3 Query: 117 QESFKCPDDFGFYPHHISCDKYWKCDN-GVAELKTCGNGLAFDATDSKYLTENCDYLHNV 293 ++ F D G Y C KY++CD+ +TC + L + A + CD+ +V Sbjct: 67 EDDFCKERDAGCYVDLKDCSKYYQCDDFHKTHHRTCSDQLKWSA-----VKNICDHAADV 121 Query: 294 ECGERTQLEPPISTPHCSRLYGIF 365 +C +R L+P + P S GI+ Sbjct: 122 DC-DRKPLKPRV--PDRSEKVGIW 142 >SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1601 Score = 31.9 bits (69), Expect = 0.69 Identities = 19/60 (31%), Positives = 26/60 (43%) Frame = +3 Query: 120 ESFKCPDDFGFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVEC 299 E F G Y C Y++C G + K C +GL F+A L ++CD V C Sbjct: 225 EKFCAGKTDGTYADPKDCSAYYQCKKGRSFKKFCPDGLKFNA-----LIKSCDEPSKVNC 279 >SB_55307| Best HMM Match : HEAT (HMM E-Value=2.4e-11) Length = 1552 Score = 31.9 bits (69), Expect = 0.69 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Frame = -3 Query: 378 CFHQGRCRTVSNSEEWRLGAQAVSSLRTQRCE-GSRSSRSSIWNLWRRKRDRCRRFSVRL 202 C+H + E RL A A+ L +QRC+ + + S +W+ R + FS L Sbjct: 493 CYHGLSSAQLLQVHELRLLAHALLILSSQRCDTRTEKNLGSTLQVWQSFLSRVKHFSSFL 552 Query: 201 HRC 193 RC Sbjct: 553 RRC 555 >SB_5780| Best HMM Match : EGF_CA (HMM E-Value=0) Length = 263 Score = 31.5 bits (68), Expect = 0.91 Identities = 21/83 (25%), Positives = 31/83 (37%), Gaps = 1/83 (1%) Frame = +3 Query: 168 SCDKYWKCDNGVAELK-TCGNGLAFDATDSKYLTENCDYLHNVECGERTQLEPPISTPHC 344 +CDK KCDN + C G + D + + E H C + + I + HC Sbjct: 86 TCDKNAKCDNTIGSYHCMCNPGFSGDGRECTDIDECVTGDHT--CDKNAKCNNIIGSYHC 143 Query: 345 SRLYGIFPDENKCDVFWNCWNGE 413 + G D C C G+ Sbjct: 144 TCNPGFSGDGRNCTDIDECLTGD 166 >SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 797 Score = 31.5 bits (68), Expect = 0.91 Identities = 12/40 (30%), Positives = 21/40 (52%) Frame = +3 Query: 324 PISTPHCSRLYGIFPDENKCDVFWNCWNGEASRYQCSPGL 443 P++ C ++YG+ C W GE +R+Q +PG+ Sbjct: 100 PLAANPCRQVYGVPLGGIGCGTIGRGWRGEFNRWQLTPGI 139 >SB_2198| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 962 Score = 31.5 bits (68), Expect = 0.91 Identities = 46/170 (27%), Positives = 66/170 (38%), Gaps = 5/170 (2%) Frame = -1 Query: 590 SSGMSVTAERA--SVGDLTGGW--AAESVCYFFVFALRNLISPHADAGLSVVGKSGAALI 423 S+G+SV + A SV + G A+ S A L A AGLSV G S + Sbjct: 3 SAGLSVASASAGLSVASASAGLSVASASAGLSVAGASAGLSVASASAGLSVAGASAGLSV 62 Query: 422 AGGFSVPAVPENVALVFIREDAVQSRTVRSGDWGLKLCPLSA-LNVVKVVAVLGQVFGIC 246 AG + +V A + + A +V GL + SA L+V A L + Sbjct: 63 AGASAGLSVASASAGLSV-ASASAGLSVAGASAGLSVAGASAGLSVASASAGL----SVA 117 Query: 245 GVESETVAAGFQFGYTVVALPVFVTGDVVRVETEVVGAFEGLLGHSYAEG 96 G + AG G +V + ++ V GA GL S + G Sbjct: 118 GASAGLSVAGASAGLSVASASAGLSVASASAGLSVAGASAGLSAASASAG 167 >SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18) Length = 123 Score = 31.1 bits (67), Expect = 1.2 Identities = 18/56 (32%), Positives = 27/56 (48%) Frame = +3 Query: 147 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQ 314 G Y H +C Y C N + + C GL ++ D+K + CD+ N C E+ Q Sbjct: 68 GDYAHPENCKMYITCSNKITYERQCPAGLNWN--DAK---KWCDWPKNAPCEEKCQ 118 >SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 767 Score = 31.1 bits (67), Expect = 1.2 Identities = 17/54 (31%), Positives = 24/54 (44%) Frame = +3 Query: 381 CDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNEEVANGFGCPAPG 542 C F +C N AS C GL Y+ +++ C W V +C + G G G Sbjct: 91 CRGFIHCHNYNASYKPCPGGLLYNEKTKQCDWPRNV-DCPMGNLDCGVGIVGGG 143 Score = 28.3 bits (60), Expect = 8.5 Identities = 14/44 (31%), Positives = 21/44 (47%) Frame = +3 Query: 168 SCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVEC 299 +C + C N A K C GL ++ T+ CD+ NV+C Sbjct: 90 ACRGFIHCHNYNASYKPCPGGLLYNEK-----TKQCDWPRNVDC 128 >SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29) Length = 339 Score = 30.7 bits (66), Expect = 1.6 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Frame = +3 Query: 141 DFGFYPHHISCDKYWKCDN-GVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQL 317 D G Y C KY++CD+ +TC L + A + CD+ +V+C +R L Sbjct: 26 DAGCYVDLKDCSKYYQCDDFHKTHHRTCSEQLKWSA-----VKNICDHAADVDC-DRKPL 79 Query: 318 EPPISTPHC 344 +P HC Sbjct: 80 KPRCDL-HC 87 >SB_44060| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10) Length = 64 Score = 30.3 bits (65), Expect = 2.1 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = +3 Query: 141 DFGFYPHHISCDKYWKCDN-GVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQL 317 D G Y C KY++CD+ +TC + L + A + CD+ +V+C +R L Sbjct: 8 DAGCYVDLKDCSKYYQCDDFHKTHHRTCSDQLKWSA-----VKNICDHAADVDC-DRKPL 61 Query: 318 EP 323 +P Sbjct: 62 KP 63 >SB_43856| Best HMM Match : Laminin_I (HMM E-Value=0.057) Length = 976 Score = 30.3 bits (65), Expect = 2.1 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Frame = -3 Query: 360 CRTVSNSEEWRLGAQAVSSLRTQRCEGSRSSRS-SIWNLWRR---KRDRCRRFSVRL 202 CR +SN W+ A+ EGS S S S+ L R+ +RD+CRR ++ Sbjct: 187 CRLLSNEMSWQKRAEDTIRRAGVDSEGSDSEESPSVETLCRKLQSQRDQCRRLEAKI 243 >SB_17775| Best HMM Match : Coiled (HMM E-Value=2.3) Length = 877 Score = 29.5 bits (63), Expect = 3.7 Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 2/115 (1%) Frame = -1 Query: 461 GLSVVGKSGAALIAGGFSVPAVPENVALVFIREDAVQSRTVRSGDWGLKLCPLSALNVVK 282 G+ VVG S G SV V ++VF+ R+V +G S + V + Sbjct: 471 GVFVVGSSVVVDFGSGSSVVGVIGGSSVVFV------GRSVVTG------VGRSVVGVSR 518 Query: 281 VVAVLGQVFGIC--GVESETVAAGFQFGYTVVALPVFVTGDVVRVETEVVGAFEG 123 V+ G V GI GV + G GY+VVA+ V G V V VVG G Sbjct: 519 VIVGSGVVVGISRSGVVCISFVVGVVVGYSVVAVYSSVVG--VVVGNSVVGVCSG 571 >SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1011 Score = 29.1 bits (62), Expect = 4.8 Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 2/86 (2%) Frame = +1 Query: 217 PAATVSLSTPQIPNXXXXXXXXXXXLSAERGHSLSPQSPLLTVRDCTASSLMKTSATFS- 393 P+ T + STP P+ + + S S T + S T +T S Sbjct: 449 PSLTHTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTSSTPSTPSTPSTPSA 508 Query: 394 -GTAGTEKPPAISAAPDLPTTESPAS 468 GT GT P+ +AP P+T S S Sbjct: 509 PGTPGTPSTPSTPSAPGTPSTPSTPS 534 >SB_12832| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1169 Score = 29.1 bits (62), Expect = 4.8 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = +1 Query: 592 CRKHYICLEGVAREYGCPIGT 654 C K + C EG+ E CP+GT Sbjct: 879 CSKAHYCPEGIEAEVPCPVGT 899 >SB_54736| Best HMM Match : TF_Otx (HMM E-Value=1.7) Length = 123 Score = 29.1 bits (62), Expect = 4.8 Identities = 16/39 (41%), Positives = 21/39 (53%) Frame = +2 Query: 569 PSRSSPKIAVNITSVSRALPASTVAPSEPFSRSXXADGT 685 P+ +P+ SVS +PASTV+ S P RS GT Sbjct: 16 PTLLAPRAFATAPSVSE-VPASTVSSSSPLRRSPGPSGT 53 >SB_3108| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 631 Score = 29.1 bits (62), Expect = 4.8 Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 1/83 (1%) Frame = +3 Query: 168 SCDKYWKCDNGVAELK-TCGNGLAFDATDSKYLTENCDYLHNVECGERTQLEPPISTPHC 344 +CDK KCDN + TC G + + + T+ C + C + + I + HC Sbjct: 534 TCDKNAKCDNTIGSYHCTCNPGFSGNGRECTD-TDEC-VTGDHTCDKNARCGNTIGSYHC 591 Query: 345 SRLYGIFPDENKCDVFWNCWNGE 413 + G + +C C G+ Sbjct: 592 TCNPGFSGNGRECTDIDECVTGD 614 >SB_53136| Best HMM Match : RVT_1 (HMM E-Value=4.6e-28) Length = 934 Score = 28.7 bits (61), Expect = 6.4 Identities = 17/60 (28%), Positives = 27/60 (45%) Frame = +1 Query: 439 DLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPEDCRKHYICLE 618 D P +P +R + KT D PV +PT S++ ++P+ K ICL+ Sbjct: 375 DQPVQNAPRRVAVALRPQLKKTLNDLVDKEIIAPVTTPTSWISSMVVVPKKNGKLRICLD 434 >SB_53929| Best HMM Match : Amelogenin (HMM E-Value=3.6) Length = 156 Score = 28.7 bits (61), Expect = 6.4 Identities = 24/92 (26%), Positives = 40/92 (43%) Frame = +1 Query: 295 SAERGHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASAC 474 ++E +++ +S R SLM A+ TA + P +AAP P T + A A Sbjct: 7 TSEAHYNIQSKSKTSAARSSVIRSLMSAEASL--TAASAAPVTPTAAPAAPVTPTAAPAA 64 Query: 475 GLIRFRSAKTKK*QTDSAAQPPVRSPTLARSA 570 + + + T + A P +PT A +A Sbjct: 65 PVTPTAAPAARVTPTAAPAAPV--TPTAAPAA 94 >SB_25689| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 582 Score = 28.7 bits (61), Expect = 6.4 Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 1/73 (1%) Frame = +3 Query: 225 NGLAFDATDSKYLTENCDYLHNVECGERT-QLEPPISTPHCSRLYGIFPDENKCDVFWNC 401 + LAF A+ + L + + C + + PP ST C + + D+ C N Sbjct: 272 SSLAFSASSADQLGVQREAVEKAMCSAKPGKCPPPFSTGFCPDITDVPSDQVPCGPSIND 331 Query: 402 WNGEASRYQCSPG 440 G+++ ++C PG Sbjct: 332 PKGKSNDWEC-PG 343 >SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69) Length = 404 Score = 28.7 bits (61), Expect = 6.4 Identities = 24/92 (26%), Positives = 40/92 (43%) Frame = +1 Query: 295 SAERGHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASAC 474 ++E +++ +S R SLM A+ TA + P +AAP P T + A A Sbjct: 164 TSEAHYNIQSKSKTSAARSSVIRSLMSAEASL--TAASAAPVTPTAAPAAPVTPTAAPAA 221 Query: 475 GLIRFRSAKTKK*QTDSAAQPPVRSPTLARSA 570 + + + T + A P +PT A +A Sbjct: 222 PVTPTAAPAARVTPTAAPAAPV--TPTAAPAA 251 >SB_1701| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 404 Score = 28.7 bits (61), Expect = 6.4 Identities = 38/145 (26%), Positives = 51/145 (35%), Gaps = 3/145 (2%) Frame = -1 Query: 545 LTGGWAAESVCYFFVFALRNLISPHADAGLSVVGKSGAALIAG---GFSVPAVPENVALV 375 L GG + S A L A AGLSV G S +AG G SV +++ Sbjct: 169 LAGGVGSASAGLSVASASAGLSVASASAGLSVAGASAGLSVAGASAGLSVAGASAGLSVA 228 Query: 374 FIREDAVQSRTVRSGDWGLKLCPLSALNVVKVVAVLGQVFGICGVESETVAAGFQFGYTV 195 A +V S GL + SA VA F + G + A G +V Sbjct: 229 ----GASAGLSVASASAGLSVASASA---GLSVAGASAGFSVAGASAGLSVASASAGLSV 281 Query: 194 VALPVFVTGDVVRVETEVVGAFEGL 120 + ++ V GA GL Sbjct: 282 ASASAGLSVASASAGLSVAGASAGL 306 Score = 28.7 bits (61), Expect = 6.4 Identities = 40/142 (28%), Positives = 54/142 (38%), Gaps = 5/142 (3%) Frame = -1 Query: 590 SSGMSVTAERA--SVGDLTGGW--AAESVCYFFVFALRNLISPHADAGLSVVGKSGAALI 423 S+G+SV A SV + G A+ S A L A AGLSV G S + Sbjct: 249 SAGLSVAGASAGFSVAGASAGLSVASASAGLSVASASAGLSVASASAGLSVAGASAGLSV 308 Query: 422 AGGFSVPAVPENVALVFIREDAVQSRTVRSGDWGLKLCPLSA-LNVVKVVAVLGQVFGIC 246 AG + +V A + + A +V S GL + SA L+V A L Sbjct: 309 AGASAGLSVASASAGLSV-ASASAGLSVASASAGLSVASASAGLSVAGASAGLSVAGASA 367 Query: 245 GVESETVAAGFQFGYTVVALPV 180 G+ +AG L V Sbjct: 368 GLSVAGASAGLSVAGASAGLSV 389 >SB_40091| Best HMM Match : CNH (HMM E-Value=8.5e-07) Length = 653 Score = 28.3 bits (60), Expect = 8.5 Identities = 22/77 (28%), Positives = 32/77 (41%) Frame = +1 Query: 346 RDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDS 525 +D +S+L G GT K A + AP+ P E P I+ + K Q+ + Sbjct: 127 QDNNSSTLKGDEVINEGDTGTFK--ANTPAPEAPQEEEPPPLPPKIKKDHYQVPKVQSST 184 Query: 526 AAQPPVRSPTLARSAVT 576 PP + P L S T Sbjct: 185 RPTPPPKPPHLKVSRTT 201 >SB_13351| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 501 Score = 28.3 bits (60), Expect = 8.5 Identities = 19/50 (38%), Positives = 24/50 (48%) Frame = +3 Query: 492 ECKNEEVANGFGCPAPGEVSNAGSFSRHAHPRRLP*TLHLSRGRCPRVRL 641 E KN VA+G G G V AG+ RH+ + L RGR R+ L Sbjct: 171 EIKNSNVAHGQGS---GRVEKAGTKRRHSKAKTLQERFPTFRGRHERLGL 217 >SB_11034| Best HMM Match : Securin (HMM E-Value=6.8) Length = 249 Score = 28.3 bits (60), Expect = 8.5 Identities = 16/58 (27%), Positives = 26/58 (44%) Frame = +1 Query: 445 PTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPEDCRKHYICLE 618 P +P +R + KT D PV +PT S++ ++P+ K ICL+ Sbjct: 67 PVQHAPRRVAAALRPQLKKTLNDLVDKEIIAPVTTPTSWISSMVVVPKKDGKLRICLD 124 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 25,669,691 Number of Sequences: 59808 Number of extensions: 551855 Number of successful extensions: 1745 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 1514 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1725 length of database: 16,821,457 effective HSP length: 81 effective length of database: 11,977,009 effective search space used: 2443309836 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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