Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_E16
(857 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 6e-08
SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16) 38 0.014
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.024
SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09) 36 0.032
SB_26497| Best HMM Match : DUF963 (HMM E-Value=0.24) 36 0.056
SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15) 36 0.056
SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17) 35 0.074
SB_11987| Best HMM Match : OTU (HMM E-Value=1.1e-24) 35 0.097
SB_52309| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14) 32 0.69
SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10) 32 0.69
SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.69
SB_55307| Best HMM Match : HEAT (HMM E-Value=2.4e-11) 32 0.69
SB_5780| Best HMM Match : EGF_CA (HMM E-Value=0) 31 0.91
SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.91
SB_2198| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.91
SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18) 31 1.2
SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29) 31 1.6
SB_44060| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10) 30 2.1
SB_43856| Best HMM Match : Laminin_I (HMM E-Value=0.057) 30 2.1
SB_17775| Best HMM Match : Coiled (HMM E-Value=2.3) 29 3.7
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_12832| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_54736| Best HMM Match : TF_Otx (HMM E-Value=1.7) 29 4.8
SB_3108| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_53136| Best HMM Match : RVT_1 (HMM E-Value=4.6e-28) 29 6.4
SB_53929| Best HMM Match : Amelogenin (HMM E-Value=3.6) 29 6.4
SB_25689| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69) 29 6.4
SB_1701| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_40091| Best HMM Match : CNH (HMM E-Value=8.5e-07) 28 8.5
SB_13351| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_11034| Best HMM Match : Securin (HMM E-Value=6.8) 28 8.5
>SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1671
Score = 55.2 bits (127), Expect = 6e-08
Identities = 38/124 (30%), Positives = 51/124 (41%), Gaps = 10/124 (8%)
Frame = +3
Query: 147 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGER---TQL 317
G Y +C+ + C N + C L F+ T T++CD NV+CG T
Sbjct: 449 GDYQDPDACEGFISCSNHITYHMPCPENLRFNPT-----TKHCDNPENVQCGPTRPPTPK 503
Query: 318 EPPIS------TPHC-SRLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMW 476
PP + +P C + G + D N C+ F C NG C L YD C W
Sbjct: 504 VPPTTKAPFTKSPFCVGKQNGKYADANNCNGFVMCSNGYIYYMDCPSNLRYDPAKGRCEW 563
Query: 477 ADQV 488
AD V
Sbjct: 564 ADTV 567
Score = 53.2 bits (122), Expect = 3e-07
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 14/133 (10%)
Frame = +3
Query: 147 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQLEP- 323
G Y +C+ + C NG C + L +D + C++ V+CG+R + P
Sbjct: 524 GKYADANNCNGFVMCSNGYIYYMDCPSNLRYDPAKGR-----CEWADTVDCGQRPTISPH 578
Query: 324 ------------PISTPHCS-RLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESR 464
P +P C + G + D + C+ F C NG A + C L +D +
Sbjct: 579 PPKPTTMPPQPTPPKSPFCEEKKNGDYADPSNCNGFITCSNGYAYKRDCPFNLKFDTKKL 638
Query: 465 VCMWADQVPECKN 503
C W ++V CK+
Sbjct: 639 ECEWPNKV-NCKS 650
Score = 37.1 bits (82), Expect = 0.018
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Frame = +3
Query: 294 ECGERTQLE--PPISTPHCS-RLYGIFPDENKCDVFWNCWNG-EASRYQCSPGLAYDRES 461
+C R QL P + + C+ R G + D + C+++ C NG + C GLA++
Sbjct: 298 KCYIRKQLPNLPLVDSNFCTERQDGNYADSSNCNLYITCSNGFTIANRHCPTGLAFNEAI 357
Query: 462 RVCMWADQVPECKNEEVANGF 524
+C + VP C +GF
Sbjct: 358 GMCDYPSNVPGCSGSS-GSGF 377
>SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16)
Length = 518
Score = 37.5 bits (83), Expect = 0.014
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 357 GIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQV 488
GI+ ++ C F C G A + C PGL ++ + VC W+ +V
Sbjct: 464 GIYAEKENCYGFVLCGGGIAHKKTCPPGLIFNTDLMVCDWSHEV 507
Score = 35.1 bits (77), Expect = 0.074
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +3
Query: 147 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVEC 299
G Y +C + C G+A KTC GL F+ TD CD+ H V+C
Sbjct: 464 GIYAEKENCYGFVLCGGGIAHKKTCPPGLIFN-TDLMV----CDWSHEVKC 509
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 36.7 bits (81), Expect = 0.024
Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
Frame = +3
Query: 36 LSCQDLVRNMNSRCXXXXXXXXXXXXXQESFKCPDD-FGFYPHHISCDKYWKCDN-GVAE 209
L CQ L N + C ++ C D G+Y C ++++CD A
Sbjct: 753 LHCQTL--NPDGSCTVVQNFAVVNAMCVDTTFCKDKPNGYYADPRDCSRFYQCDAFHRAF 810
Query: 210 LKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQLEPPISTP 338
L C GL + T + CD+ NV+C +T PP TP
Sbjct: 811 LHRCSPGLKWSITKT-----TCDWPRNVDCDRKTP-TPPSPTP 847
Score = 31.5 bits (68), Expect = 0.91
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +3
Query: 147 GFYPHHISCDKYWKCDNGVAE--LKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQLE 320
G+Y C +++ C G AE L C GL + + + CDY H V+C T
Sbjct: 574 GYYADPKDCAQFYFC-YGSAESLLSRCPRGLLWSV-----VKKTCDYPHLVDCSRPT--T 625
Query: 321 PPIST 335
PP++T
Sbjct: 626 PPVTT 630
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Frame = +3
Query: 327 ISTPHCS-RLYGIFPDENKCDVFWNCWN-GEASRYQCSPGLAYDRESRVCMWADQV 488
+ T C + G + D C F+ C A ++CSPGL + C W V
Sbjct: 778 VDTTFCKDKPNGYYADPRDCSRFYQCDAFHRAFLHRCSPGLKWSITKTTCDWPRNV 833
>SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09)
Length = 98
Score = 36.3 bits (80), Expect = 0.032
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 327 ISTPHCS-RLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQ 485
+S+ C + G++ DE F C+NG +C+ GL ++ + ++C DQ
Sbjct: 2 LSSNFCKVKTSGVYADEKNPSKFVICYNGVREERECAKGLVFNPKEKICEQPDQ 55
>SB_26497| Best HMM Match : DUF963 (HMM E-Value=0.24)
Length = 889
Score = 35.5 bits (78), Expect = 0.056
Identities = 23/88 (26%), Positives = 40/88 (45%)
Frame = +1
Query: 313 SLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFR 492
S++P S + + C + TS+ S AGT++PP + AP P ++ G F
Sbjct: 378 SVAPTSLFGSAKSCAPETKTTTSSN-SLLAGTQQPPTTTTAPVFGQPGKPVASLGTGLFG 436
Query: 493 SAKTKK*QTDSAAQPPVRSPTLARSAVT 576
A+T + T + + + A S+ T
Sbjct: 437 QAETAETSTTAVSTQSISQAVSAPSSST 464
>SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15)
Length = 134
Score = 35.5 bits (78), Expect = 0.056
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 366 PDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMW 476
PD C +++C G+A R C PG +D C W
Sbjct: 32 PDSTSCQHYYHCTWGKAVRKDCGPGRVWDPRITNCNW 68
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 150 FYPHHISCDKYWKCDNGVAELKTCGNGLAFD 242
+ P SC Y+ C G A K CG G +D
Sbjct: 30 YLPDSTSCQHYYHCTWGKAVRKDCGPGRVWD 60
>SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17)
Length = 225
Score = 35.1 bits (77), Expect = 0.074
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 327 ISTPHCSRLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVP 491
+ST +R G +P + C ++ C NG A C GL ++ E + C W P
Sbjct: 82 LSTICKNRADGNYPHPDFCKMYIACSNGIAYEMPCPAGLNWNDEKKYCDWPFNAP 136
Score = 34.7 bits (76), Expect = 0.097
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = +3
Query: 147 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVEC 299
G YPH C Y C NG+A C GL ++ + KY CD+ N C
Sbjct: 92 GNYPHPDFCKMYIACSNGIAYEMPCPAGLNWN-DEKKY----CDWPFNAPC 137
>SB_11987| Best HMM Match : OTU (HMM E-Value=1.1e-24)
Length = 1142
Score = 34.7 bits (76), Expect = 0.097
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Frame = +1
Query: 409 EKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSA---AQP--PVRSPTLARSAV 573
E P + AP + + P+ A R ++AKT+ QTDS+ ++P PV SPT + +
Sbjct: 472 EVPVQLEQAPSVEAGQEPSPAEFWSRLKNAKTQSKQTDSSPSTSKPATPVTSPTEGKQSH 531
Query: 574 TLIPED 591
+ +P D
Sbjct: 532 SQLPAD 537
>SB_52309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 386
Score = 32.3 bits (70), Expect = 0.52
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 3/108 (2%)
Frame = +3
Query: 168 SCDKYWKCDNGVAELKT-CGNGLAFDATDSKYLTENCDYLHNVECGERTQLEPPISTPHC 344
+CDK KC+N + C G + + + + E C N C + + I + HC
Sbjct: 107 TCDKNAKCNNTIGSYHCMCNPGFSGNGRNCTDIDE-C-VTGNHACDKNARCRNNIGSHHC 164
Query: 345 SRLYGIFPDENKCDVFWNCWNGEASRYQCSP-GLAYDR-ESRVCMWAD 482
+ G + + CD C +AS ++CSP + Y+ S VC D
Sbjct: 165 TCKSGFYGNGASCDDIDEC--RDAS-HKCSPHAICYNTLGSFVCSCKD 209
>SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14)
Length = 480
Score = 31.9 bits (69), Expect = 0.69
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 147 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCD 278
G Y H CD Y C NG+A C GL ++ +T+ CD
Sbjct: 342 GNYAHPSKCDMYITCSNGIAHEMPCPAGLNWND-----VTKECD 380
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 357 GIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVC 470
G + +KCD++ C NG A C GL ++ ++ C
Sbjct: 342 GNYAHPSKCDMYITCSNGIAHEMPCPAGLNWNDVTKEC 379
>SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)
Length = 155
Score = 31.9 bits (69), Expect = 0.69
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +3
Query: 117 QESFKCPDDFGFYPHHISCDKYWKCDN-GVAELKTCGNGLAFDATDSKYLTENCDYLHNV 293
++ F D G Y C KY++CD+ +TC + L + A + CD+ +V
Sbjct: 67 EDDFCKERDAGCYVDLKDCSKYYQCDDFHKTHHRTCSDQLKWSA-----VKNICDHAADV 121
Query: 294 ECGERTQLEPPISTPHCSRLYGIF 365
+C +R L+P + P S GI+
Sbjct: 122 DC-DRKPLKPRV--PDRSEKVGIW 142
>SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1601
Score = 31.9 bits (69), Expect = 0.69
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +3
Query: 120 ESFKCPDDFGFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVEC 299
E F G Y C Y++C G + K C +GL F+A L ++CD V C
Sbjct: 225 EKFCAGKTDGTYADPKDCSAYYQCKKGRSFKKFCPDGLKFNA-----LIKSCDEPSKVNC 279
>SB_55307| Best HMM Match : HEAT (HMM E-Value=2.4e-11)
Length = 1552
Score = 31.9 bits (69), Expect = 0.69
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = -3
Query: 378 CFHQGRCRTVSNSEEWRLGAQAVSSLRTQRCE-GSRSSRSSIWNLWRRKRDRCRRFSVRL 202
C+H + E RL A A+ L +QRC+ + + S +W+ R + FS L
Sbjct: 493 CYHGLSSAQLLQVHELRLLAHALLILSSQRCDTRTEKNLGSTLQVWQSFLSRVKHFSSFL 552
Query: 201 HRC 193
RC
Sbjct: 553 RRC 555
>SB_5780| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 263
Score = 31.5 bits (68), Expect = 0.91
Identities = 21/83 (25%), Positives = 31/83 (37%), Gaps = 1/83 (1%)
Frame = +3
Query: 168 SCDKYWKCDNGVAELK-TCGNGLAFDATDSKYLTENCDYLHNVECGERTQLEPPISTPHC 344
+CDK KCDN + C G + D + + E H C + + I + HC
Sbjct: 86 TCDKNAKCDNTIGSYHCMCNPGFSGDGRECTDIDECVTGDHT--CDKNAKCNNIIGSYHC 143
Query: 345 SRLYGIFPDENKCDVFWNCWNGE 413
+ G D C C G+
Sbjct: 144 TCNPGFSGDGRNCTDIDECLTGD 166
>SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 31.5 bits (68), Expect = 0.91
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 324 PISTPHCSRLYGIFPDENKCDVFWNCWNGEASRYQCSPGL 443
P++ C ++YG+ C W GE +R+Q +PG+
Sbjct: 100 PLAANPCRQVYGVPLGGIGCGTIGRGWRGEFNRWQLTPGI 139
>SB_2198| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 962
Score = 31.5 bits (68), Expect = 0.91
Identities = 46/170 (27%), Positives = 66/170 (38%), Gaps = 5/170 (2%)
Frame = -1
Query: 590 SSGMSVTAERA--SVGDLTGGW--AAESVCYFFVFALRNLISPHADAGLSVVGKSGAALI 423
S+G+SV + A SV + G A+ S A L A AGLSV G S +
Sbjct: 3 SAGLSVASASAGLSVASASAGLSVASASAGLSVAGASAGLSVASASAGLSVAGASAGLSV 62
Query: 422 AGGFSVPAVPENVALVFIREDAVQSRTVRSGDWGLKLCPLSA-LNVVKVVAVLGQVFGIC 246
AG + +V A + + A +V GL + SA L+V A L +
Sbjct: 63 AGASAGLSVASASAGLSV-ASASAGLSVAGASAGLSVAGASAGLSVASASAGL----SVA 117
Query: 245 GVESETVAAGFQFGYTVVALPVFVTGDVVRVETEVVGAFEGLLGHSYAEG 96
G + AG G +V + ++ V GA GL S + G
Sbjct: 118 GASAGLSVAGASAGLSVASASAGLSVASASAGLSVAGASAGLSAASASAG 167
>SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18)
Length = 123
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +3
Query: 147 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQ 314
G Y H +C Y C N + + C GL ++ D+K + CD+ N C E+ Q
Sbjct: 68 GDYAHPENCKMYITCSNKITYERQCPAGLNWN--DAK---KWCDWPKNAPCEEKCQ 118
>SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +3
Query: 381 CDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNEEVANGFGCPAPG 542
C F +C N AS C GL Y+ +++ C W V +C + G G G
Sbjct: 91 CRGFIHCHNYNASYKPCPGGLLYNEKTKQCDWPRNV-DCPMGNLDCGVGIVGGG 143
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 168 SCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVEC 299
+C + C N A K C GL ++ T+ CD+ NV+C
Sbjct: 90 ACRGFIHCHNYNASYKPCPGGLLYNEK-----TKQCDWPRNVDC 128
>SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29)
Length = 339
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +3
Query: 141 DFGFYPHHISCDKYWKCDN-GVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQL 317
D G Y C KY++CD+ +TC L + A + CD+ +V+C +R L
Sbjct: 26 DAGCYVDLKDCSKYYQCDDFHKTHHRTCSEQLKWSA-----VKNICDHAADVDC-DRKPL 79
Query: 318 EPPISTPHC 344
+P HC
Sbjct: 80 KPRCDL-HC 87
>SB_44060| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)
Length = 64
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 141 DFGFYPHHISCDKYWKCDN-GVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQL 317
D G Y C KY++CD+ +TC + L + A + CD+ +V+C +R L
Sbjct: 8 DAGCYVDLKDCSKYYQCDDFHKTHHRTCSDQLKWSA-----VKNICDHAADVDC-DRKPL 61
Query: 318 EP 323
+P
Sbjct: 62 KP 63
>SB_43856| Best HMM Match : Laminin_I (HMM E-Value=0.057)
Length = 976
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = -3
Query: 360 CRTVSNSEEWRLGAQAVSSLRTQRCEGSRSSRS-SIWNLWRR---KRDRCRRFSVRL 202
CR +SN W+ A+ EGS S S S+ L R+ +RD+CRR ++
Sbjct: 187 CRLLSNEMSWQKRAEDTIRRAGVDSEGSDSEESPSVETLCRKLQSQRDQCRRLEAKI 243
>SB_17775| Best HMM Match : Coiled (HMM E-Value=2.3)
Length = 877
Score = 29.5 bits (63), Expect = 3.7
Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 2/115 (1%)
Frame = -1
Query: 461 GLSVVGKSGAALIAGGFSVPAVPENVALVFIREDAVQSRTVRSGDWGLKLCPLSALNVVK 282
G+ VVG S G SV V ++VF+ R+V +G S + V +
Sbjct: 471 GVFVVGSSVVVDFGSGSSVVGVIGGSSVVFV------GRSVVTG------VGRSVVGVSR 518
Query: 281 VVAVLGQVFGIC--GVESETVAAGFQFGYTVVALPVFVTGDVVRVETEVVGAFEG 123
V+ G V GI GV + G GY+VVA+ V G V V VVG G
Sbjct: 519 VIVGSGVVVGISRSGVVCISFVVGVVVGYSVVAVYSSVVG--VVVGNSVVGVCSG 571
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 29.1 bits (62), Expect = 4.8
Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Frame = +1
Query: 217 PAATVSLSTPQIPNXXXXXXXXXXXLSAERGHSLSPQSPLLTVRDCTASSLMKTSATFS- 393
P+ T + STP P+ + + S S T + S T +T S
Sbjct: 449 PSLTHTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTSSTPSTPSTPSTPSA 508
Query: 394 -GTAGTEKPPAISAAPDLPTTESPAS 468
GT GT P+ +AP P+T S S
Sbjct: 509 PGTPGTPSTPSTPSAPGTPSTPSTPS 534
>SB_12832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1169
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 592 CRKHYICLEGVAREYGCPIGT 654
C K + C EG+ E CP+GT
Sbjct: 879 CSKAHYCPEGIEAEVPCPVGT 899
>SB_54736| Best HMM Match : TF_Otx (HMM E-Value=1.7)
Length = 123
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +2
Query: 569 PSRSSPKIAVNITSVSRALPASTVAPSEPFSRSXXADGT 685
P+ +P+ SVS +PASTV+ S P RS GT
Sbjct: 16 PTLLAPRAFATAPSVSE-VPASTVSSSSPLRRSPGPSGT 53
>SB_3108| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 631
Score = 29.1 bits (62), Expect = 4.8
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +3
Query: 168 SCDKYWKCDNGVAELK-TCGNGLAFDATDSKYLTENCDYLHNVECGERTQLEPPISTPHC 344
+CDK KCDN + TC G + + + T+ C + C + + I + HC
Sbjct: 534 TCDKNAKCDNTIGSYHCTCNPGFSGNGRECTD-TDEC-VTGDHTCDKNARCGNTIGSYHC 591
Query: 345 SRLYGIFPDENKCDVFWNCWNGE 413
+ G + +C C G+
Sbjct: 592 TCNPGFSGNGRECTDIDECVTGD 614
>SB_53136| Best HMM Match : RVT_1 (HMM E-Value=4.6e-28)
Length = 934
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = +1
Query: 439 DLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPEDCRKHYICLE 618
D P +P +R + KT D PV +PT S++ ++P+ K ICL+
Sbjct: 375 DQPVQNAPRRVAVALRPQLKKTLNDLVDKEIIAPVTTPTSWISSMVVVPKKNGKLRICLD 434
>SB_53929| Best HMM Match : Amelogenin (HMM E-Value=3.6)
Length = 156
Score = 28.7 bits (61), Expect = 6.4
Identities = 24/92 (26%), Positives = 40/92 (43%)
Frame = +1
Query: 295 SAERGHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASAC 474
++E +++ +S R SLM A+ TA + P +AAP P T + A A
Sbjct: 7 TSEAHYNIQSKSKTSAARSSVIRSLMSAEASL--TAASAAPVTPTAAPAAPVTPTAAPAA 64
Query: 475 GLIRFRSAKTKK*QTDSAAQPPVRSPTLARSA 570
+ + + T + A P +PT A +A
Sbjct: 65 PVTPTAAPAARVTPTAAPAAPV--TPTAAPAA 94
>SB_25689| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 582
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 225 NGLAFDATDSKYLTENCDYLHNVECGERT-QLEPPISTPHCSRLYGIFPDENKCDVFWNC 401
+ LAF A+ + L + + C + + PP ST C + + D+ C N
Sbjct: 272 SSLAFSASSADQLGVQREAVEKAMCSAKPGKCPPPFSTGFCPDITDVPSDQVPCGPSIND 331
Query: 402 WNGEASRYQCSPG 440
G+++ ++C PG
Sbjct: 332 PKGKSNDWEC-PG 343
>SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69)
Length = 404
Score = 28.7 bits (61), Expect = 6.4
Identities = 24/92 (26%), Positives = 40/92 (43%)
Frame = +1
Query: 295 SAERGHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASAC 474
++E +++ +S R SLM A+ TA + P +AAP P T + A A
Sbjct: 164 TSEAHYNIQSKSKTSAARSSVIRSLMSAEASL--TAASAAPVTPTAAPAAPVTPTAAPAA 221
Query: 475 GLIRFRSAKTKK*QTDSAAQPPVRSPTLARSA 570
+ + + T + A P +PT A +A
Sbjct: 222 PVTPTAAPAARVTPTAAPAAPV--TPTAAPAA 251
>SB_1701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 404
Score = 28.7 bits (61), Expect = 6.4
Identities = 38/145 (26%), Positives = 51/145 (35%), Gaps = 3/145 (2%)
Frame = -1
Query: 545 LTGGWAAESVCYFFVFALRNLISPHADAGLSVVGKSGAALIAG---GFSVPAVPENVALV 375
L GG + S A L A AGLSV G S +AG G SV +++
Sbjct: 169 LAGGVGSASAGLSVASASAGLSVASASAGLSVAGASAGLSVAGASAGLSVAGASAGLSVA 228
Query: 374 FIREDAVQSRTVRSGDWGLKLCPLSALNVVKVVAVLGQVFGICGVESETVAAGFQFGYTV 195
A +V S GL + SA VA F + G + A G +V
Sbjct: 229 ----GASAGLSVASASAGLSVASASA---GLSVAGASAGFSVAGASAGLSVASASAGLSV 281
Query: 194 VALPVFVTGDVVRVETEVVGAFEGL 120
+ ++ V GA GL
Sbjct: 282 ASASAGLSVASASAGLSVAGASAGL 306
Score = 28.7 bits (61), Expect = 6.4
Identities = 40/142 (28%), Positives = 54/142 (38%), Gaps = 5/142 (3%)
Frame = -1
Query: 590 SSGMSVTAERA--SVGDLTGGW--AAESVCYFFVFALRNLISPHADAGLSVVGKSGAALI 423
S+G+SV A SV + G A+ S A L A AGLSV G S +
Sbjct: 249 SAGLSVAGASAGFSVAGASAGLSVASASAGLSVASASAGLSVASASAGLSVAGASAGLSV 308
Query: 422 AGGFSVPAVPENVALVFIREDAVQSRTVRSGDWGLKLCPLSA-LNVVKVVAVLGQVFGIC 246
AG + +V A + + A +V S GL + SA L+V A L
Sbjct: 309 AGASAGLSVASASAGLSV-ASASAGLSVASASAGLSVASASAGLSVAGASAGLSVAGASA 367
Query: 245 GVESETVAAGFQFGYTVVALPV 180
G+ +AG L V
Sbjct: 368 GLSVAGASAGLSVAGASAGLSV 389
>SB_40091| Best HMM Match : CNH (HMM E-Value=8.5e-07)
Length = 653
Score = 28.3 bits (60), Expect = 8.5
Identities = 22/77 (28%), Positives = 32/77 (41%)
Frame = +1
Query: 346 RDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDS 525
+D +S+L G GT K A + AP+ P E P I+ + K Q+ +
Sbjct: 127 QDNNSSTLKGDEVINEGDTGTFK--ANTPAPEAPQEEEPPPLPPKIKKDHYQVPKVQSST 184
Query: 526 AAQPPVRSPTLARSAVT 576
PP + P L S T
Sbjct: 185 RPTPPPKPPHLKVSRTT 201
>SB_13351| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 28.3 bits (60), Expect = 8.5
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +3
Query: 492 ECKNEEVANGFGCPAPGEVSNAGSFSRHAHPRRLP*TLHLSRGRCPRVRL 641
E KN VA+G G G V AG+ RH+ + L RGR R+ L
Sbjct: 171 EIKNSNVAHGQGS---GRVEKAGTKRRHSKAKTLQERFPTFRGRHERLGL 217
>SB_11034| Best HMM Match : Securin (HMM E-Value=6.8)
Length = 249
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +1
Query: 445 PTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPEDCRKHYICLE 618
P +P +R + KT D PV +PT S++ ++P+ K ICL+
Sbjct: 67 PVQHAPRRVAAALRPQLKKTLNDLVDKEIIAPVTTPTSWISSMVVVPKKDGKLRICLD 124
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,669,691
Number of Sequences: 59808
Number of extensions: 551855
Number of successful extensions: 1745
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1725
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2443309836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -