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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_E16
         (857 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)              55   6e-08
SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16)                38   0.014
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)              37   0.024
SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09)                 36   0.032
SB_26497| Best HMM Match : DUF963 (HMM E-Value=0.24)                   36   0.056
SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15)                36   0.056
SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17)                35   0.074
SB_11987| Best HMM Match : OTU (HMM E-Value=1.1e-24)                   35   0.097
SB_52309| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.52 
SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14)                32   0.69 
SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)                32   0.69 
SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.69 
SB_55307| Best HMM Match : HEAT (HMM E-Value=2.4e-11)                  32   0.69 
SB_5780| Best HMM Match : EGF_CA (HMM E-Value=0)                       31   0.91 
SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   0.91 
SB_2198| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   0.91 
SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18)                   31   1.2  
SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.2  
SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29)                31   1.6  
SB_44060| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)                30   2.1  
SB_43856| Best HMM Match : Laminin_I (HMM E-Value=0.057)               30   2.1  
SB_17775| Best HMM Match : Coiled (HMM E-Value=2.3)                    29   3.7  
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.8  
SB_12832| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.8  
SB_54736| Best HMM Match : TF_Otx (HMM E-Value=1.7)                    29   4.8  
SB_3108| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   4.8  
SB_53136| Best HMM Match : RVT_1 (HMM E-Value=4.6e-28)                 29   6.4  
SB_53929| Best HMM Match : Amelogenin (HMM E-Value=3.6)                29   6.4  
SB_25689| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.4  
SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69)           29   6.4  
SB_1701| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   6.4  
SB_40091| Best HMM Match : CNH (HMM E-Value=8.5e-07)                   28   8.5  
SB_13351| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.5  
SB_11034| Best HMM Match : Securin (HMM E-Value=6.8)                   28   8.5  

>SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1671

 Score = 55.2 bits (127), Expect = 6e-08
 Identities = 38/124 (30%), Positives = 51/124 (41%), Gaps = 10/124 (8%)
 Frame = +3

Query: 147 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGER---TQL 317
           G Y    +C+ +  C N +     C   L F+ T     T++CD   NV+CG     T  
Sbjct: 449 GDYQDPDACEGFISCSNHITYHMPCPENLRFNPT-----TKHCDNPENVQCGPTRPPTPK 503

Query: 318 EPPIS------TPHC-SRLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMW 476
            PP +      +P C  +  G + D N C+ F  C NG      C   L YD     C W
Sbjct: 504 VPPTTKAPFTKSPFCVGKQNGKYADANNCNGFVMCSNGYIYYMDCPSNLRYDPAKGRCEW 563

Query: 477 ADQV 488
           AD V
Sbjct: 564 ADTV 567



 Score = 53.2 bits (122), Expect = 3e-07
 Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 14/133 (10%)
 Frame = +3

Query: 147 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQLEP- 323
           G Y    +C+ +  C NG      C + L +D    +     C++   V+CG+R  + P 
Sbjct: 524 GKYADANNCNGFVMCSNGYIYYMDCPSNLRYDPAKGR-----CEWADTVDCGQRPTISPH 578

Query: 324 ------------PISTPHCS-RLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESR 464
                       P  +P C  +  G + D + C+ F  C NG A +  C   L +D +  
Sbjct: 579 PPKPTTMPPQPTPPKSPFCEEKKNGDYADPSNCNGFITCSNGYAYKRDCPFNLKFDTKKL 638

Query: 465 VCMWADQVPECKN 503
            C W ++V  CK+
Sbjct: 639 ECEWPNKV-NCKS 650



 Score = 37.1 bits (82), Expect = 0.018
 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
 Frame = +3

Query: 294 ECGERTQLE--PPISTPHCS-RLYGIFPDENKCDVFWNCWNG-EASRYQCSPGLAYDRES 461
           +C  R QL   P + +  C+ R  G + D + C+++  C NG   +   C  GLA++   
Sbjct: 298 KCYIRKQLPNLPLVDSNFCTERQDGNYADSSNCNLYITCSNGFTIANRHCPTGLAFNEAI 357

Query: 462 RVCMWADQVPECKNEEVANGF 524
            +C +   VP C      +GF
Sbjct: 358 GMCDYPSNVPGCSGSS-GSGF 377


>SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16)
          Length = 518

 Score = 37.5 bits (83), Expect = 0.014
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +3

Query: 357 GIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQV 488
           GI+ ++  C  F  C  G A +  C PGL ++ +  VC W+ +V
Sbjct: 464 GIYAEKENCYGFVLCGGGIAHKKTCPPGLIFNTDLMVCDWSHEV 507



 Score = 35.1 bits (77), Expect = 0.074
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = +3

Query: 147 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVEC 299
           G Y    +C  +  C  G+A  KTC  GL F+ TD       CD+ H V+C
Sbjct: 464 GIYAEKENCYGFVLCGGGIAHKKTCPPGLIFN-TDLMV----CDWSHEVKC 509


>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1831

 Score = 36.7 bits (81), Expect = 0.024
 Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
 Frame = +3

Query: 36   LSCQDLVRNMNSRCXXXXXXXXXXXXXQESFKCPDD-FGFYPHHISCDKYWKCDN-GVAE 209
            L CQ L  N +  C              ++  C D   G+Y     C ++++CD    A 
Sbjct: 753  LHCQTL--NPDGSCTVVQNFAVVNAMCVDTTFCKDKPNGYYADPRDCSRFYQCDAFHRAF 810

Query: 210  LKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQLEPPISTP 338
            L  C  GL +  T +      CD+  NV+C  +T   PP  TP
Sbjct: 811  LHRCSPGLKWSITKT-----TCDWPRNVDCDRKTP-TPPSPTP 847



 Score = 31.5 bits (68), Expect = 0.91
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = +3

Query: 147 GFYPHHISCDKYWKCDNGVAE--LKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQLE 320
           G+Y     C +++ C  G AE  L  C  GL +       + + CDY H V+C   T   
Sbjct: 574 GYYADPKDCAQFYFC-YGSAESLLSRCPRGLLWSV-----VKKTCDYPHLVDCSRPT--T 625

Query: 321 PPIST 335
           PP++T
Sbjct: 626 PPVTT 630



 Score = 29.5 bits (63), Expect = 3.7
 Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
 Frame = +3

Query: 327 ISTPHCS-RLYGIFPDENKCDVFWNCWN-GEASRYQCSPGLAYDRESRVCMWADQV 488
           + T  C  +  G + D   C  F+ C     A  ++CSPGL +      C W   V
Sbjct: 778 VDTTFCKDKPNGYYADPRDCSRFYQCDAFHRAFLHRCSPGLKWSITKTTCDWPRNV 833


>SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09)
          Length = 98

 Score = 36.3 bits (80), Expect = 0.032
 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +3

Query: 327 ISTPHCS-RLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQ 485
           +S+  C  +  G++ DE     F  C+NG     +C+ GL ++ + ++C   DQ
Sbjct: 2   LSSNFCKVKTSGVYADEKNPSKFVICYNGVREERECAKGLVFNPKEKICEQPDQ 55


>SB_26497| Best HMM Match : DUF963 (HMM E-Value=0.24)
          Length = 889

 Score = 35.5 bits (78), Expect = 0.056
 Identities = 23/88 (26%), Positives = 40/88 (45%)
 Frame = +1

Query: 313 SLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFR 492
           S++P S   + + C   +   TS+  S  AGT++PP  + AP       P ++ G   F 
Sbjct: 378 SVAPTSLFGSAKSCAPETKTTTSSN-SLLAGTQQPPTTTTAPVFGQPGKPVASLGTGLFG 436

Query: 493 SAKTKK*QTDSAAQPPVRSPTLARSAVT 576
            A+T +  T + +   +     A S+ T
Sbjct: 437 QAETAETSTTAVSTQSISQAVSAPSSST 464


>SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15)
          Length = 134

 Score = 35.5 bits (78), Expect = 0.056
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 366 PDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMW 476
           PD   C  +++C  G+A R  C PG  +D     C W
Sbjct: 32  PDSTSCQHYYHCTWGKAVRKDCGPGRVWDPRITNCNW 68



 Score = 29.1 bits (62), Expect = 4.8
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 150 FYPHHISCDKYWKCDNGVAELKTCGNGLAFD 242
           + P   SC  Y+ C  G A  K CG G  +D
Sbjct: 30  YLPDSTSCQHYYHCTWGKAVRKDCGPGRVWD 60


>SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17)
          Length = 225

 Score = 35.1 bits (77), Expect = 0.074
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +3

Query: 327 ISTPHCSRLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVP 491
           +ST   +R  G +P  + C ++  C NG A    C  GL ++ E + C W    P
Sbjct: 82  LSTICKNRADGNYPHPDFCKMYIACSNGIAYEMPCPAGLNWNDEKKYCDWPFNAP 136



 Score = 34.7 bits (76), Expect = 0.097
 Identities = 19/51 (37%), Positives = 24/51 (47%)
 Frame = +3

Query: 147 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVEC 299
           G YPH   C  Y  C NG+A    C  GL ++  + KY    CD+  N  C
Sbjct: 92  GNYPHPDFCKMYIACSNGIAYEMPCPAGLNWN-DEKKY----CDWPFNAPC 137


>SB_11987| Best HMM Match : OTU (HMM E-Value=1.1e-24)
          Length = 1142

 Score = 34.7 bits (76), Expect = 0.097
 Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
 Frame = +1

Query: 409 EKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSA---AQP--PVRSPTLARSAV 573
           E P  +  AP +   + P+ A    R ++AKT+  QTDS+   ++P  PV SPT  + + 
Sbjct: 472 EVPVQLEQAPSVEAGQEPSPAEFWSRLKNAKTQSKQTDSSPSTSKPATPVTSPTEGKQSH 531

Query: 574 TLIPED 591
           + +P D
Sbjct: 532 SQLPAD 537


>SB_52309| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 386

 Score = 32.3 bits (70), Expect = 0.52
 Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 3/108 (2%)
 Frame = +3

Query: 168 SCDKYWKCDNGVAELKT-CGNGLAFDATDSKYLTENCDYLHNVECGERTQLEPPISTPHC 344
           +CDK  KC+N +      C  G + +  +   + E C    N  C +  +    I + HC
Sbjct: 107 TCDKNAKCNNTIGSYHCMCNPGFSGNGRNCTDIDE-C-VTGNHACDKNARCRNNIGSHHC 164

Query: 345 SRLYGIFPDENKCDVFWNCWNGEASRYQCSP-GLAYDR-ESRVCMWAD 482
           +   G + +   CD    C   +AS ++CSP  + Y+   S VC   D
Sbjct: 165 TCKSGFYGNGASCDDIDEC--RDAS-HKCSPHAICYNTLGSFVCSCKD 209


>SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14)
          Length = 480

 Score = 31.9 bits (69), Expect = 0.69
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +3

Query: 147 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCD 278
           G Y H   CD Y  C NG+A    C  GL ++      +T+ CD
Sbjct: 342 GNYAHPSKCDMYITCSNGIAHEMPCPAGLNWND-----VTKECD 380



 Score = 30.3 bits (65), Expect = 2.1
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +3

Query: 357 GIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVC 470
           G +   +KCD++  C NG A    C  GL ++  ++ C
Sbjct: 342 GNYAHPSKCDMYITCSNGIAHEMPCPAGLNWNDVTKEC 379


>SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)
          Length = 155

 Score = 31.9 bits (69), Expect = 0.69
 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
 Frame = +3

Query: 117 QESFKCPDDFGFYPHHISCDKYWKCDN-GVAELKTCGNGLAFDATDSKYLTENCDYLHNV 293
           ++ F    D G Y     C KY++CD+      +TC + L + A     +   CD+  +V
Sbjct: 67  EDDFCKERDAGCYVDLKDCSKYYQCDDFHKTHHRTCSDQLKWSA-----VKNICDHAADV 121

Query: 294 ECGERTQLEPPISTPHCSRLYGIF 365
           +C +R  L+P +  P  S   GI+
Sbjct: 122 DC-DRKPLKPRV--PDRSEKVGIW 142


>SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1601

 Score = 31.9 bits (69), Expect = 0.69
 Identities = 19/60 (31%), Positives = 26/60 (43%)
 Frame = +3

Query: 120 ESFKCPDDFGFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVEC 299
           E F      G Y     C  Y++C  G +  K C +GL F+A     L ++CD    V C
Sbjct: 225 EKFCAGKTDGTYADPKDCSAYYQCKKGRSFKKFCPDGLKFNA-----LIKSCDEPSKVNC 279


>SB_55307| Best HMM Match : HEAT (HMM E-Value=2.4e-11)
          Length = 1552

 Score = 31.9 bits (69), Expect = 0.69
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = -3

Query: 378 CFHQGRCRTVSNSEEWRLGAQAVSSLRTQRCE-GSRSSRSSIWNLWRRKRDRCRRFSVRL 202
           C+H      +    E RL A A+  L +QRC+  +  +  S   +W+    R + FS  L
Sbjct: 493 CYHGLSSAQLLQVHELRLLAHALLILSSQRCDTRTEKNLGSTLQVWQSFLSRVKHFSSFL 552

Query: 201 HRC 193
            RC
Sbjct: 553 RRC 555


>SB_5780| Best HMM Match : EGF_CA (HMM E-Value=0)
          Length = 263

 Score = 31.5 bits (68), Expect = 0.91
 Identities = 21/83 (25%), Positives = 31/83 (37%), Gaps = 1/83 (1%)
 Frame = +3

Query: 168 SCDKYWKCDNGVAELK-TCGNGLAFDATDSKYLTENCDYLHNVECGERTQLEPPISTPHC 344
           +CDK  KCDN +      C  G + D  +   + E     H   C +  +    I + HC
Sbjct: 86  TCDKNAKCDNTIGSYHCMCNPGFSGDGRECTDIDECVTGDHT--CDKNAKCNNIIGSYHC 143

Query: 345 SRLYGIFPDENKCDVFWNCWNGE 413
           +   G   D   C     C  G+
Sbjct: 144 TCNPGFSGDGRNCTDIDECLTGD 166


>SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 797

 Score = 31.5 bits (68), Expect = 0.91
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +3

Query: 324 PISTPHCSRLYGIFPDENKCDVFWNCWNGEASRYQCSPGL 443
           P++   C ++YG+      C      W GE +R+Q +PG+
Sbjct: 100 PLAANPCRQVYGVPLGGIGCGTIGRGWRGEFNRWQLTPGI 139


>SB_2198| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 962

 Score = 31.5 bits (68), Expect = 0.91
 Identities = 46/170 (27%), Positives = 66/170 (38%), Gaps = 5/170 (2%)
 Frame = -1

Query: 590 SSGMSVTAERA--SVGDLTGGW--AAESVCYFFVFALRNLISPHADAGLSVVGKSGAALI 423
           S+G+SV +  A  SV   + G   A+ S       A   L    A AGLSV G S    +
Sbjct: 3   SAGLSVASASAGLSVASASAGLSVASASAGLSVAGASAGLSVASASAGLSVAGASAGLSV 62

Query: 422 AGGFSVPAVPENVALVFIREDAVQSRTVRSGDWGLKLCPLSA-LNVVKVVAVLGQVFGIC 246
           AG  +  +V    A + +   A    +V     GL +   SA L+V    A L     + 
Sbjct: 63  AGASAGLSVASASAGLSV-ASASAGLSVAGASAGLSVAGASAGLSVASASAGL----SVA 117

Query: 245 GVESETVAAGFQFGYTVVALPVFVTGDVVRVETEVVGAFEGLLGHSYAEG 96
           G  +    AG   G +V +    ++         V GA  GL   S + G
Sbjct: 118 GASAGLSVAGASAGLSVASASAGLSVASASAGLSVAGASAGLSAASASAG 167


>SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18)
          Length = 123

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = +3

Query: 147 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQ 314
           G Y H  +C  Y  C N +   + C  GL ++  D+K   + CD+  N  C E+ Q
Sbjct: 68  GDYAHPENCKMYITCSNKITYERQCPAGLNWN--DAK---KWCDWPKNAPCEEKCQ 118


>SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 767

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = +3

Query: 381 CDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNEEVANGFGCPAPG 542
           C  F +C N  AS   C  GL Y+ +++ C W   V +C    +  G G    G
Sbjct: 91  CRGFIHCHNYNASYKPCPGGLLYNEKTKQCDWPRNV-DCPMGNLDCGVGIVGGG 143



 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +3

Query: 168 SCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVEC 299
           +C  +  C N  A  K C  GL ++       T+ CD+  NV+C
Sbjct: 90  ACRGFIHCHNYNASYKPCPGGLLYNEK-----TKQCDWPRNVDC 128


>SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29)
          Length = 339

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
 Frame = +3

Query: 141 DFGFYPHHISCDKYWKCDN-GVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQL 317
           D G Y     C KY++CD+      +TC   L + A     +   CD+  +V+C +R  L
Sbjct: 26  DAGCYVDLKDCSKYYQCDDFHKTHHRTCSEQLKWSA-----VKNICDHAADVDC-DRKPL 79

Query: 318 EPPISTPHC 344
           +P     HC
Sbjct: 80  KPRCDL-HC 87


>SB_44060| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)
          Length = 64

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +3

Query: 141 DFGFYPHHISCDKYWKCDN-GVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQL 317
           D G Y     C KY++CD+      +TC + L + A     +   CD+  +V+C +R  L
Sbjct: 8   DAGCYVDLKDCSKYYQCDDFHKTHHRTCSDQLKWSA-----VKNICDHAADVDC-DRKPL 61

Query: 318 EP 323
           +P
Sbjct: 62  KP 63


>SB_43856| Best HMM Match : Laminin_I (HMM E-Value=0.057)
          Length = 976

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
 Frame = -3

Query: 360 CRTVSNSEEWRLGAQAVSSLRTQRCEGSRSSRS-SIWNLWRR---KRDRCRRFSVRL 202
           CR +SN   W+  A+          EGS S  S S+  L R+   +RD+CRR   ++
Sbjct: 187 CRLLSNEMSWQKRAEDTIRRAGVDSEGSDSEESPSVETLCRKLQSQRDQCRRLEAKI 243


>SB_17775| Best HMM Match : Coiled (HMM E-Value=2.3)
          Length = 877

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 2/115 (1%)
 Frame = -1

Query: 461 GLSVVGKSGAALIAGGFSVPAVPENVALVFIREDAVQSRTVRSGDWGLKLCPLSALNVVK 282
           G+ VVG S       G SV  V    ++VF+       R+V +G         S + V +
Sbjct: 471 GVFVVGSSVVVDFGSGSSVVGVIGGSSVVFV------GRSVVTG------VGRSVVGVSR 518

Query: 281 VVAVLGQVFGIC--GVESETVAAGFQFGYTVVALPVFVTGDVVRVETEVVGAFEG 123
           V+   G V GI   GV   +   G   GY+VVA+   V G  V V   VVG   G
Sbjct: 519 VIVGSGVVVGISRSGVVCISFVVGVVVGYSVVAVYSSVVG--VVVGNSVVGVCSG 571


>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1011

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
 Frame = +1

Query: 217 PAATVSLSTPQIPNXXXXXXXXXXXLSAERGHSLSPQSPLLTVRDCTASSLMKTSATFS- 393
           P+ T + STP  P+            +     + S  S   T    +  S   T +T S 
Sbjct: 449 PSLTHTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTSSTPSTPSTPSTPSA 508

Query: 394 -GTAGTEKPPAISAAPDLPTTESPAS 468
            GT GT   P+  +AP  P+T S  S
Sbjct: 509 PGTPGTPSTPSTPSAPGTPSTPSTPS 534


>SB_12832| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1169

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 592 CRKHYICLEGVAREYGCPIGT 654
           C K + C EG+  E  CP+GT
Sbjct: 879 CSKAHYCPEGIEAEVPCPVGT 899


>SB_54736| Best HMM Match : TF_Otx (HMM E-Value=1.7)
          Length = 123

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +2

Query: 569 PSRSSPKIAVNITSVSRALPASTVAPSEPFSRSXXADGT 685
           P+  +P+      SVS  +PASTV+ S P  RS    GT
Sbjct: 16  PTLLAPRAFATAPSVSE-VPASTVSSSSPLRRSPGPSGT 53


>SB_3108| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 631

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
 Frame = +3

Query: 168 SCDKYWKCDNGVAELK-TCGNGLAFDATDSKYLTENCDYLHNVECGERTQLEPPISTPHC 344
           +CDK  KCDN +     TC  G + +  +    T+ C    +  C +  +    I + HC
Sbjct: 534 TCDKNAKCDNTIGSYHCTCNPGFSGNGRECTD-TDEC-VTGDHTCDKNARCGNTIGSYHC 591

Query: 345 SRLYGIFPDENKCDVFWNCWNGE 413
           +   G   +  +C     C  G+
Sbjct: 592 TCNPGFSGNGRECTDIDECVTGD 614


>SB_53136| Best HMM Match : RVT_1 (HMM E-Value=4.6e-28)
          Length = 934

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 17/60 (28%), Positives = 27/60 (45%)
 Frame = +1

Query: 439 DLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPEDCRKHYICLE 618
           D P   +P      +R +  KT     D     PV +PT   S++ ++P+   K  ICL+
Sbjct: 375 DQPVQNAPRRVAVALRPQLKKTLNDLVDKEIIAPVTTPTSWISSMVVVPKKNGKLRICLD 434


>SB_53929| Best HMM Match : Amelogenin (HMM E-Value=3.6)
          Length = 156

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 24/92 (26%), Positives = 40/92 (43%)
 Frame = +1

Query: 295 SAERGHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASAC 474
           ++E  +++  +S     R     SLM   A+   TA +  P   +AAP  P T + A A 
Sbjct: 7   TSEAHYNIQSKSKTSAARSSVIRSLMSAEASL--TAASAAPVTPTAAPAAPVTPTAAPAA 64

Query: 475 GLIRFRSAKTKK*QTDSAAQPPVRSPTLARSA 570
            +    +   +   T + A P   +PT A +A
Sbjct: 65  PVTPTAAPAARVTPTAAPAAPV--TPTAAPAA 94


>SB_25689| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 582

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
 Frame = +3

Query: 225 NGLAFDATDSKYLTENCDYLHNVECGERT-QLEPPISTPHCSRLYGIFPDENKCDVFWNC 401
           + LAF A+ +  L    + +    C  +  +  PP ST  C  +  +  D+  C    N 
Sbjct: 272 SSLAFSASSADQLGVQREAVEKAMCSAKPGKCPPPFSTGFCPDITDVPSDQVPCGPSIND 331

Query: 402 WNGEASRYQCSPG 440
             G+++ ++C PG
Sbjct: 332 PKGKSNDWEC-PG 343


>SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69)
          Length = 404

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 24/92 (26%), Positives = 40/92 (43%)
 Frame = +1

Query: 295 SAERGHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASAC 474
           ++E  +++  +S     R     SLM   A+   TA +  P   +AAP  P T + A A 
Sbjct: 164 TSEAHYNIQSKSKTSAARSSVIRSLMSAEASL--TAASAAPVTPTAAPAAPVTPTAAPAA 221

Query: 475 GLIRFRSAKTKK*QTDSAAQPPVRSPTLARSA 570
            +    +   +   T + A P   +PT A +A
Sbjct: 222 PVTPTAAPAARVTPTAAPAAPV--TPTAAPAA 251


>SB_1701| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 404

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 38/145 (26%), Positives = 51/145 (35%), Gaps = 3/145 (2%)
 Frame = -1

Query: 545 LTGGWAAESVCYFFVFALRNLISPHADAGLSVVGKSGAALIAG---GFSVPAVPENVALV 375
           L GG  + S       A   L    A AGLSV G S    +AG   G SV      +++ 
Sbjct: 169 LAGGVGSASAGLSVASASAGLSVASASAGLSVAGASAGLSVAGASAGLSVAGASAGLSVA 228

Query: 374 FIREDAVQSRTVRSGDWGLKLCPLSALNVVKVVAVLGQVFGICGVESETVAAGFQFGYTV 195
                A    +V S   GL +   SA      VA     F + G  +    A    G +V
Sbjct: 229 ----GASAGLSVASASAGLSVASASA---GLSVAGASAGFSVAGASAGLSVASASAGLSV 281

Query: 194 VALPVFVTGDVVRVETEVVGAFEGL 120
            +    ++         V GA  GL
Sbjct: 282 ASASAGLSVASASAGLSVAGASAGL 306



 Score = 28.7 bits (61), Expect = 6.4
 Identities = 40/142 (28%), Positives = 54/142 (38%), Gaps = 5/142 (3%)
 Frame = -1

Query: 590 SSGMSVTAERA--SVGDLTGGW--AAESVCYFFVFALRNLISPHADAGLSVVGKSGAALI 423
           S+G+SV    A  SV   + G   A+ S       A   L    A AGLSV G S    +
Sbjct: 249 SAGLSVAGASAGFSVAGASAGLSVASASAGLSVASASAGLSVASASAGLSVAGASAGLSV 308

Query: 422 AGGFSVPAVPENVALVFIREDAVQSRTVRSGDWGLKLCPLSA-LNVVKVVAVLGQVFGIC 246
           AG  +  +V    A + +   A    +V S   GL +   SA L+V    A L       
Sbjct: 309 AGASAGLSVASASAGLSV-ASASAGLSVASASAGLSVASASAGLSVAGASAGLSVAGASA 367

Query: 245 GVESETVAAGFQFGYTVVALPV 180
           G+     +AG         L V
Sbjct: 368 GLSVAGASAGLSVAGASAGLSV 389


>SB_40091| Best HMM Match : CNH (HMM E-Value=8.5e-07)
          Length = 653

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 22/77 (28%), Positives = 32/77 (41%)
 Frame = +1

Query: 346 RDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDS 525
           +D  +S+L        G  GT K  A + AP+ P  E P      I+    +  K Q+ +
Sbjct: 127 QDNNSSTLKGDEVINEGDTGTFK--ANTPAPEAPQEEEPPPLPPKIKKDHYQVPKVQSST 184

Query: 526 AAQPPVRSPTLARSAVT 576
              PP + P L  S  T
Sbjct: 185 RPTPPPKPPHLKVSRTT 201


>SB_13351| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 501

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = +3

Query: 492 ECKNEEVANGFGCPAPGEVSNAGSFSRHAHPRRLP*TLHLSRGRCPRVRL 641
           E KN  VA+G G    G V  AG+  RH+  + L       RGR  R+ L
Sbjct: 171 EIKNSNVAHGQGS---GRVEKAGTKRRHSKAKTLQERFPTFRGRHERLGL 217


>SB_11034| Best HMM Match : Securin (HMM E-Value=6.8)
          Length = 249

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 16/58 (27%), Positives = 26/58 (44%)
 Frame = +1

Query: 445 PTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPEDCRKHYICLE 618
           P   +P      +R +  KT     D     PV +PT   S++ ++P+   K  ICL+
Sbjct: 67  PVQHAPRRVAAALRPQLKKTLNDLVDKEIIAPVTTPTSWISSMVVVPKKDGKLRICLD 124


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,669,691
Number of Sequences: 59808
Number of extensions: 551855
Number of successful extensions: 1745
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1725
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2443309836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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