Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_E14
(867 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 100 5e-22
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 85 1e-17
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 73 7e-14
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 67 3e-12
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 66 6e-12
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 62 1e-10
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 58 2e-09
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 57 4e-09
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 53 6e-08
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 49 1e-06
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 42 1e-04
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 38 0.001
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 32 0.092
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 32 0.12
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 31 0.16
SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyce... 28 1.5
SPBC31F10.06c |sar1||ADP-ribosylation factor Sar1|Schizosaccharo... 28 2.0
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 27 2.6
SPBC36B7.02 |||Svf1 family protein Svf2|Schizosaccharomyces pomb... 27 3.5
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 26 8.0
SPBC582.05c |brc1||BRCT domain protein Brc1|Schizosaccharomyces ... 26 8.0
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 99.5 bits (237), Expect = 5e-22
Identities = 44/99 (44%), Positives = 69/99 (69%)
Frame = +3
Query: 306 VLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPI 485
+L++LDTAG E++++MR+ Y++ G+GF++VY++T+ +F +I + I RVK + P+
Sbjct: 57 LLDVLDTAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPV 116
Query: 486 LLVGNKADLEHQREVAHAEGAALAXMWGCPFVEASAKSR 602
+LV NK DLE +R V+ AEG LA C +VE SAK R
Sbjct: 117 VLVANKCDLEAERVVSRAEGEQLAKSMHCLYVETSAKLR 155
Score = 51.2 bits (117), Expect = 2e-07
Identities = 22/52 (42%), Positives = 32/52 (61%)
Frame = +2
Query: 137 LRSTIMREFXXXXXXXXXXXXXALTVQFVSGCFMEKYDPTIEDFYRKEIEVD 292
+RST +RE+ ALT+Q + F+++YDPTIED YRK+ E+D
Sbjct: 1 MRSTYLREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEID 52
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 85.0 bits (201), Expect = 1e-17
Identities = 40/95 (42%), Positives = 63/95 (66%)
Frame = +3
Query: 312 EILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILL 491
EI+DTAG ++++ + + G+V+VYS+T+ +F+ +K +++ I G+E VPI++
Sbjct: 57 EIIDTAGQDEYSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVV 116
Query: 492 VGNKADLEHQREVAHAEGAALAXMWGCPFVEASAK 596
VGNK+DL QR V EG ALA W C + EASA+
Sbjct: 117 VGNKSDLHMQRAVTAEEGKALANEWKCAWTEASAR 151
Score = 32.7 bits (71), Expect = 0.070
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 203 ALTVQFVSGCFMEKYDPTIEDFYRKEIE 286
+LTVQ+V F+E Y PTIE+ + K I+
Sbjct: 21 SLTVQYVENHFVESYYPTIENTFSKNIK 48
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 72.5 bits (170), Expect = 7e-14
Identities = 36/97 (37%), Positives = 60/97 (61%)
Frame = +3
Query: 309 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPIL 488
L+I DTAG E+F ++ Y + G +++Y +T+ ++F +++ + + SE V +
Sbjct: 60 LQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQ-HASENVYKI 118
Query: 489 LVGNKADLEHQREVAHAEGAALAXMWGCPFVEASAKS 599
L+GNK D E QR+V+ +G ALA G F+EASAK+
Sbjct: 119 LIGNKCDCEDQRQVSFEQGQALADELGVKFLEASAKT 155
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 66.9 bits (156), Expect = 3e-12
Identities = 35/99 (35%), Positives = 55/99 (55%)
Frame = +3
Query: 309 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPIL 488
L+I DTAG E+F ++ Y + G ++VY +T+ +F ++K + I R E V L
Sbjct: 59 LQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRY-AVEGVNRL 117
Query: 489 LVGNKADLEHQREVAHAEGAALAXMWGCPFVEASAKSRT 605
LVGNK+D+ ++ V ++ A PF+E SAK T
Sbjct: 118 LVGNKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDST 156
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 66.1 bits (154), Expect = 6e-12
Identities = 36/97 (37%), Positives = 56/97 (57%)
Frame = +3
Query: 309 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPIL 488
L++ DTAG E+F S+ YI++ ++VY +TNH +F + + E + +G + V I+
Sbjct: 62 LQLWDTAGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDD-VIIV 120
Query: 489 LVGNKADLEHQREVAHAEGAALAXMWGCPFVEASAKS 599
LVGNK DL +R+V EG A +E SAK+
Sbjct: 121 LVGNKTDLADKRQVTQEEGEKKAKELKIMHMETSAKA 157
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 61.7 bits (143), Expect = 1e-10
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Frame = +3
Query: 312 EILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDI-KPMKELITRVKGSERVPIL 488
+I DTAG E++ ++ Y + G ++VY +T +F ++ + +KEL R + I+
Sbjct: 62 QIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKEL--REHADSNIVIM 119
Query: 489 LVGNKADLEHQREVAHAEGAALAXMWGCPFVEASA 593
LVGNK DL H R V+ E A A F+E SA
Sbjct: 120 LVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSA 154
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 57.6 bits (133), Expect = 2e-09
Identities = 29/80 (36%), Positives = 48/80 (60%)
Frame = +3
Query: 309 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPIL 488
L+I DTAG E+F S+ Y + G V+VY +TN +F+++ I R + ++
Sbjct: 64 LQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDI-RAMAPSTICVV 122
Query: 489 LVGNKADLEHQREVAHAEGA 548
L G+K+DL++QR+V+ E A
Sbjct: 123 LAGSKSDLQNQRQVSTEEAA 142
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 56.8 bits (131), Expect = 4e-09
Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Frame = +3
Query: 309 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKP-MKELITRVKGSERVPI 485
LEI DTAG E++ S+ +Y +N +VVY +T + + K +KEL + + E + I
Sbjct: 66 LEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKEL--QRQAPEGIVI 123
Query: 486 LLVGNKADL-EHQREVAHAEGAALAXMWGCPFVEASAKS 599
L GNK DL + +R V A+ A A F E SAK+
Sbjct: 124 ALAGNKLDLAQERRAVEKADAEAYAAEANLLFFETSAKT 162
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 52.8 bits (121), Expect = 6e-08
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 5/101 (4%)
Frame = +3
Query: 309 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMK-ELITRVKGS--ERV 479
L++ DTAG E+F S+ + + V+VY + N ++F+ + + E + + S E
Sbjct: 59 LQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETF 118
Query: 480 PILLVGNKADLEHQ-REVAHAEGAALAXMWG-CPFVEASAK 596
P +L+GNK D+E Q R V+ ++ A G P+ E SAK
Sbjct: 119 PFILLGNKVDVEEQKRMVSKSKALAFCQARGEIPYFETSAK 159
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 48.8 bits (111), Expect = 1e-06
Identities = 24/75 (32%), Positives = 44/75 (58%)
Frame = +3
Query: 315 ILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLV 494
+ DTAG E+ +RD Y GQ ++++ +T+ T++++ + RV E +PI+L
Sbjct: 62 VWDTAGQEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVRV--CENIPIVLC 119
Query: 495 GNKADLEHQREVAHA 539
GNK D++ ++ A A
Sbjct: 120 GNKVDVKERKVKAKA 134
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 41.9 bits (94), Expect = 1e-04
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Frame = +3
Query: 300 LXVLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMK-ELITRVKGSE- 473
L L++ DTAG E+F S+ + + V+VY++ N ++F ++ + E + + E
Sbjct: 56 LVTLQLWDTAGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDEC 115
Query: 474 RVPILLVGNKADLEHQREVAHAEGAA--LAXMWGCPFV--EASAKSRTT*T 614
P ++VGN+ D + + A G + EASAK T T
Sbjct: 116 AFPFIIVGNQIDKDASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVT 166
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 38.3 bits (85), Expect = 0.001
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Frame = +3
Query: 309 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKG-SERVPI 485
L + DTAG E++ +R L N ++ +S+ + ++ ++ V+ R PI
Sbjct: 66 LALWDTAGQEEYDRLRPLSYPNSNVILLCFSIDCPASLNNVT--EKWYPEVQHFCPRTPI 123
Query: 486 LLVGNKADLEHQRE------------VAHAEGAALAXMWGCPFVEASAKSRT 605
+LVG KADL R V + + ++A P+VE SAK T
Sbjct: 124 VLVGLKADLRKDRNATEVLRTQGLTPVTYQQAQSVALSMNAPYVECSAKENT 175
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 32.3 bits (70), Expect = 0.092
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +3
Query: 309 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPIL 488
L + DTAG E + +R L + ++ +S+ ++ +++ K + + +PIL
Sbjct: 56 LALWDTAGQEDYDRLRPLSYPDSHVVLICFSVDAPESLDNVQE-KWISEVLHFCSNLPIL 114
Query: 489 LVGNKADLEH 518
LVG K DL +
Sbjct: 115 LVGCKVDLRN 124
Score = 27.5 bits (58), Expect = 2.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 206 LTVQFVSGCFMEKYDPTIEDFYRKEIEVD 292
L + F G F E Y PT+ + Y ++EVD
Sbjct: 22 LLIVFSKGTFPEVYVPTVFENYVADVEVD 50
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 31.9 bits (69), Expect = 0.12
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Frame = +3
Query: 309 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPIL 488
L + DTAG E + +R L + ++ +++ + + +++ K + + +PIL
Sbjct: 56 LALWDTAGQEDYDRLRPLSYPDSHVILICFAVDSPDSLDNVQE-KWISEVLHFCSSLPIL 114
Query: 489 LVGNKADLE------------HQREVAHAEGAALAXMWGC-PFVEASAKS 599
LV KADL +Q V EG A+A G ++E SAK+
Sbjct: 115 LVACKADLRNDPKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKT 164
Score = 27.5 bits (58), Expect = 2.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 206 LTVQFVSGCFMEKYDPTIEDFYRKEIEVD 292
L + F G F E Y PT+ + Y ++EVD
Sbjct: 22 LLIVFSKGTFPEVYVPTVFENYVADVEVD 50
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 31.5 bits (68), Expect = 0.16
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +3
Query: 309 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDI--KPMKELITRVKGSERVP 482
L + DTAG E++ +R + +V +++ + + +++ K ++E+ T VP
Sbjct: 58 LALWDTAGQEEYERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLCPN---VP 114
Query: 483 ILLVGNKADL 512
+LVG KADL
Sbjct: 115 FILVGMKADL 124
>SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = -3
Query: 307 TXRRIVHFDFFSVEILYRRIIFFHKTS*YKLHSQRTLSDPTRTQHDHFK 161
T ++ FD SV L+RR + + ++ K HS++ S+P+ +H +
Sbjct: 97 TKKKKDSFDHASVTSLHRRSLSSNTSTPRKYHSRKPYSEPSVIDKEHLQ 145
>SPBC31F10.06c |sar1||ADP-ribosylation factor
Sar1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 190
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/63 (23%), Positives = 27/63 (42%)
Frame = +3
Query: 321 DTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGN 500
D G +Q + Y G V + + + + K + + ++ RVP L++GN
Sbjct: 70 DLGGHQQARRLWRDYFPEVNGIVYLVDCCDFERLSESKAELDALLAMEELARVPFLILGN 129
Query: 501 KAD 509
K D
Sbjct: 130 KID 132
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 212 QSTHSFRPHPNPTRPL*IRA 153
Q THS RP PN + PL +R+
Sbjct: 589 QQTHSSRPTPNASSPLDVRS 608
>SPBC36B7.02 |||Svf1 family protein Svf2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 353
Score = 27.1 bits (57), Expect = 3.5
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +2
Query: 308 FRNFGHRWHGAVCFDARSVYKKWSRLCSSIFINKPPNVSRHQTNEGID 451
F N GH W ++ FD KK C F P R Q + +D
Sbjct: 188 FTNLGHTWQNSILFDKS---KKSILTCLHYFPRDPSQPFRSQASLTLD 232
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 25.8 bits (54), Expect = 8.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 477 VPILLVGNKADLEHQRE 527
VPIL+VGNK + H+ +
Sbjct: 534 VPILIVGNKTKVNHEND 550
>SPBC582.05c |brc1||BRCT domain protein Brc1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 878
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -1
Query: 426 LETFGGLLMNILLQSLDH-FLYTDLASK 346
LETFGG L++S+ H F Y+ + +K
Sbjct: 132 LETFGGRFSKGLMKSMTHLFTYSGMGAK 159
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,859,226
Number of Sequences: 5004
Number of extensions: 52699
Number of successful extensions: 141
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 133
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 432473040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -