Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_E12
         (854 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   4.1  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   5.4  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   5.4  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   7.1  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   9.4  

>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/28 (25%), Positives = 15/28 (53%)
 Frame = +1

Query: 148 IPHPRVPQLPPRTYSPSEDHIIEQNVEP 231
           +P P VP++PP  +  +      ++ +P
Sbjct: 206 VPKPTVPKIPPAEFPTTSSSSALESPDP 233


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 172 LPPRTYSPSEDHIIEQNVEP 231
           LPP TY PS+ +  + N  P
Sbjct: 42  LPPITYPPSDWNCPQYNAPP 61


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 172 LPPRTYSPSEDHIIEQNVEP 231
           LPP TY PS+ +  + N  P
Sbjct: 33  LPPITYPPSDWNCPQYNAPP 52


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 148 IPHPRVPQLPPRTY 189
           +P P VP++PP  +
Sbjct: 206 VPKPTVPKIPPAEF 219


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +1

Query: 754 FRCVRARYHHLPC 792
           + C   R HH+PC
Sbjct: 935 YMCEGERKHHMPC 947


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,783
Number of Sequences: 336
Number of extensions: 3636
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23659332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)