BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_E12 (854 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 181 8e-46 SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 1e-17 SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 4e-17 SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 69 4e-12 SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 63 3e-10 SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 54 1e-07 SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 54 2e-07 SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 54 2e-07 SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 52 6e-07 SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 51 1e-06 SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 50 3e-06 SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 49 4e-06 SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05 SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 45 9e-05 SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 44 1e-04 SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 44 2e-04 SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 43 3e-04 SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 43 4e-04 SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0) 42 8e-04 SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 41 0.001 SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 41 0.001 SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003 SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0) 40 0.003 SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 39 0.006 SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.006 SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.008 SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 38 0.010 SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 38 0.014 SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 37 0.018 SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.17 SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.39 SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52 SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26) 32 0.52 SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061) 32 0.68 SB_41780| Best HMM Match : Mito_carr (HMM E-Value=3.9e-05) 31 0.90 SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14) 31 1.6 SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17) 31 1.6 SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 30 2.8 SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21) 30 2.8 SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039) 30 2.8 SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6 SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6 SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6 SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 3.6 SB_43597| Best HMM Match : TP2 (HMM E-Value=1.7) 29 3.6 SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 29 3.6 SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012) 29 4.8 SB_31266| Best HMM Match : PKI (HMM E-Value=1) 29 6.4 SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4 SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4 SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28) 28 8.4 SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40) 28 8.4 SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 28 8.4 SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 28 8.4 SB_18153| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=5) 28 8.4 >SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 304 Score = 181 bits (440), Expect = 8e-46 Identities = 100/194 (51%), Positives = 121/194 (62%), Gaps = 4/194 (2%) Frame = +2 Query: 248 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQG 424 F ++F G +A +SKTA APIERVKLL+Q Q + K D YKG++D R + +G Sbjct: 9 FVENFGLSGAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEG 68 Query: 425 LLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRY-FXXXXXXXXXXXX 601 LSFWRGN AN IRYFPTQALNFAFKD+ K +F KKT F Sbjct: 69 FLSFWRGNLANCIRYFPTQALNFAFKDQVKALF---KPKKTDSNAIKFSKNIASGGAAGA 125 Query: 602 TSLCFVYPLDFARTRLAAD--VGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQG 775 SL FVY LD+ RTRLA D VGK G+R+F+G+ + K SDGL+GLYRGF +S G Sbjct: 126 MSLFFVYSLDYCRTRLANDAKVGKKGGERQFNGMIDVYKKTIASDGLVGLYRGFVISCVG 185 Query: 776 IIIYRASYFGFYDT 817 II+YR YFG YDT Sbjct: 186 IIVYRGFYFGLYDT 199 Score = 44.8 bits (101), Expect = 9e-05 Identities = 35/179 (19%), Positives = 75/179 (41%) Frame = +2 Query: 233 ADSVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIP 412 ++++ F+K+ +GG + A+S V ++ + L + ++++ G++D + + Sbjct: 108 SNAIKFSKNIASGGAAGAMSLFFVYSLDYCRTRLANDAKVGKKGGERQFNGMIDVYKKTI 167 Query: 413 KEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXX 592 GL+ +RG + + + F D K + LG + F Sbjct: 168 ASDGLVGLYRGFVISCVGIIVYRGFYFGLYDTLKPILLG---EDAGVVISFVLGYGVTVS 224 Query: 593 XXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSV 769 S YP+D R R+ G+ ++ G +C +I K +G + L +G G ++ Sbjct: 225 AGLAS----YPIDTIRRRMMMTSGEA---VKYKGSIDCTIQILKKEGAMSLMKGAGANI 276 Score = 36.7 bits (81), Expect = 0.024 Identities = 16/51 (31%), Positives = 32/51 (62%) Frame = +2 Query: 374 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 526 +YKG +D ++I K++G +S +G AN++R + F DK+K++++ Sbjct: 248 KYKGSIDCTIQILKKEGAMSLMKGAGANILRGMAGAGVLAGF-DKFKELYV 297 >SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 453 Score = 87.4 bits (207), Expect = 1e-17 Identities = 66/183 (36%), Positives = 91/183 (49%) Frame = +2 Query: 269 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 448 GG A VS+TA AP++R+K+LLQVQ A+ GIV F + +E G+ S WRGN Sbjct: 143 GGALAGVSRTATAPLDRLKVLLQVQ------ASSTNRFGIVSGFKMMLREGGIKSLWRGN 196 Query: 449 FANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPL 628 ANVI+ P + F +K K+ L G D K TS +YPL Sbjct: 197 GANVIKIAPESGIKFFAYEKAKK--LVGSDTKALGVTDRLLAGSMAGVASQTS---IYPL 251 Query: 629 DFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGF 808 + +TRLA + GQ + GL + S I++ +G+ YRG S+ GII Y Sbjct: 252 EVLKTRLAI---RKTGQ--YRGLLHAASVIYQKEGIRSFYRGLFPSLLGIIPYAGIDLAV 306 Query: 809 YDT 817 Y+T Sbjct: 307 YET 309 Score = 59.3 bits (137), Expect = 4e-09 Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 1/165 (0%) Frame = +2 Query: 263 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 442 LAG ++ S+T++ P+E +K L ++ + Y+G++ A I +++G+ SF+R Sbjct: 235 LAGSMAGVASQTSIYPLEVLKTRLAIRKTGQ-------YRGLLHAASVIYQKEGIRSFYR 287 Query: 443 GNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLCFVY 622 G F +++ P ++ A + K +L ++ L Y Sbjct: 288 GLFPSLLGIIPYAGIDLAVYETLKNFYLNYHKNQSADPGVLVLLACGTASSTCGQLA-SY 346 Query: 623 PLDFARTRLAADV-GKGDGQREFSGLGNCISKIFKSDGLIGLYRG 754 PL RTRL A KG GQ + + + + KI DG GLYRG Sbjct: 347 PLSLVRTRLQAQAREKGGGQGD--NMVSVLRKIITEDGFKGLYRG 389 >SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 262 Score = 85.8 bits (203), Expect = 4e-17 Identities = 40/88 (45%), Positives = 63/88 (71%) Frame = +2 Query: 254 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 433 K LAGGI+ AVS+T+V+P+ERVK+LLQ+Q + ++KG++ ++I KE+G+L Sbjct: 36 KHLLAGGIAGAVSRTSVSPLERVKILLQIQ------VKNPKFKGVLPTLIQIGKEEGILG 89 Query: 434 FWRGNFANVIRYFPTQALNFAFKDKYKQ 517 +++GN NVIR FP A+ FA ++YK+ Sbjct: 90 YFKGNGTNVIRIFPYSAVQFAAYEEYKK 117 >SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 375 Score = 69.3 bits (162), Expect = 4e-12 Identities = 45/191 (23%), Positives = 87/191 (45%), Gaps = 1/191 (0%) Frame = +2 Query: 242 VAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQ 421 + + + FL GG SA ++++ +P+E VK+L QV + G++ F + K + Sbjct: 56 ITWFQSFLCGGTSAVLARSLTSPLEVVKVLAQV-------GTQEAKPGLIRTFASVYKRE 108 Query: 422 GLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXX 601 G+ +FW+GN + IR FP A+ +A ++ + ++ Sbjct: 109 GIKAFWKGNGVSCIRLFPYSAVQYAAFNR----IVASLEDPHNGELSDSGSMLAGTSSTL 164 Query: 602 TSLCFVYPLDFARTRLAAD-VGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGI 778 ++ VYP + +TRL V K + + G+ + + I + +G++ LY+G S G+ Sbjct: 165 IAMVTVYPCEVIKTRLTVQHVNKSNA--HYKGMRHALKTILREEGILALYKGVTPSFLGL 222 Query: 779 IIYRASYFGFY 811 + F Y Sbjct: 223 FPFAGGSFLAY 233 >SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) Length = 76 Score = 62.9 bits (146), Expect = 3e-10 Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Frame = +2 Query: 221 MSNLADSVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDA 397 MS ++ F ++F G +A +SKTA APIERVKLL+Q Q + K YKG+VD Sbjct: 1 MSGKKQNLHFVENFALSGAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDC 60 Query: 398 FVRIPKEQGLLSFWR 442 +R + +G+ SFWR Sbjct: 61 TMRTYRAEGIGSFWR 75 >SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) Length = 192 Score = 54.0 bits (124), Expect = 1e-07 Identities = 32/127 (25%), Positives = 61/127 (48%) Frame = +2 Query: 377 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFW 556 Y + +A R+ KE+G+L+ WRG +R A A + KQ+ L + Sbjct: 35 YTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATYSQAKQLLLSTKYFEDNIV 94 Query: 557 RYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGL 736 +F S+ P+D A+TR+ ++ DG+ E+ G + +++I +++G+ Sbjct: 95 CHFGASMISGLATTVASM----PVDIAKTRI-QNMRIIDGKPEYKGTMDVLARIVRNEGV 149 Query: 737 IGLYRGF 757 L++GF Sbjct: 150 FALWKGF 156 Score = 40.3 bits (90), Expect = 0.002 Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 3/94 (3%) Frame = +2 Query: 260 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 439 F A IS + A P++ K +Q + I YKG +D RI + +G+ + W Sbjct: 97 FGASMISGLATTVASMPVDIAKTRIQNMRI---IDGKPEYKGTMDVLARIVRNEGVFALW 153 Query: 440 RGNFANVIRYFPTQALNFAFKDKYKQV---FLGG 532 +G R P L F F ++ + F GG Sbjct: 154 KGFTPYYFRIGPHTVLTFIFLEQLNRAANYFYGG 187 >SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 306 Score = 53.6 bits (123), Expect = 2e-07 Identities = 42/174 (24%), Positives = 65/174 (37%), Gaps = 1/174 (0%) Frame = +2 Query: 239 SVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKE 418 S A K +AG S + P + VK+ Q + + I YK + AF +I K+ Sbjct: 111 SAALWKKIVAGVSSGVIGSAIATPTDLVKIRFQAVKIGETIP----YKNMFHAFYKIAKK 166 Query: 419 QGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXX 598 +G L W G V R D K + L + + Sbjct: 167 EGFLGLWTGMKPTVKRAACISGTQIPTYDHTKHLLLNAELMREGVALHL----ASALVAG 222 Query: 599 XTSLCFVYPLDFARTRLAADVGKGDGQ-REFSGLGNCISKIFKSDGLIGLYRGF 757 + C P+D RTR G+ + G +CI K + +G++ LY+GF Sbjct: 223 FVATCVASPVDIVRTRFMTQPKDTKGRPLVYQGTLDCIYKTVRHEGILALYKGF 276 >SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 274 Score = 53.6 bits (123), Expect = 2e-07 Identities = 43/177 (24%), Positives = 76/177 (42%) Frame = +2 Query: 224 SNLADSVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFV 403 SN +AFA G ++ +AP++ VK+ LQ+Q +K+ + Y+G VD V Sbjct: 30 SNTIGQIAFA-----GSVAGLAQVPLIAPVDLVKIKLQMQTEAKR-STRSVYRGPVDCLV 83 Query: 404 RIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXX 583 ++ + +GL ++GN +R P A+ F + F R Sbjct: 84 KLYRSRGLAGCFQGNTVTAVRDIPGFAVYFGVYELLCDWFSNLFGS-----RGVATYLMA 138 Query: 584 XXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 754 S +P D ++R+ AD G+ + G+ +C + +K +G+I RG Sbjct: 139 GGFAGVVSWASTFPFDVIKSRIQADGNL--GKFRYKGMMDCALQSYKEEGMIVFTRG 193 Score = 43.6 bits (98), Expect = 2e-04 Identities = 29/90 (32%), Positives = 46/90 (51%) Frame = +2 Query: 224 SNLADSVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFV 403 SNL S A +AGG + VS + P + +K +Q + RYKG++D + Sbjct: 124 SNLFGSRGVATYLMAGGFAGVVSWASTFPFDVIKSRIQADGNLGKF----RYKGMMDCAL 179 Query: 404 RIPKEQGLLSFWRGNFANVIRYFPTQALNF 493 + KE+G++ F RG + ++R F Q L F Sbjct: 180 QSYKEEGMIVFTRGIWPTLLRGF-LQVLRF 208 Score = 34.3 bits (75), Expect = 0.13 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Frame = +2 Query: 617 VYPLDFARTRLAADV-GKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRA 793 + P+D + +L K + + G +C+ K+++S GL G ++G V+ I A Sbjct: 51 IAPVDLVKIKLQMQTEAKRSTRSVYRGPVDCLVKLYRSRGLAGCFQGNTVTAVRDIPGFA 110 Query: 794 SYFGFYD 814 YFG Y+ Sbjct: 111 VYFGVYE 117 >SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 264 Score = 52.0 bits (119), Expect = 6e-07 Identities = 42/142 (29%), Positives = 63/142 (44%) Frame = +2 Query: 386 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYF 565 ++ AF I + +GLL++++GN A ++R FP A+ F + Y +V Q Sbjct: 13 VLTAFRAIYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKVL--------QTSSPA 64 Query: 566 XXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGL 745 T+ YPLD R+RLA V + G + CIS K G L Sbjct: 65 INKLVAGSLAGMTACACTYPLDMVRSRLAFQVAQDQGYTTITQTIRCIS--VKEGGPKAL 122 Query: 746 YRGFGVSVQGIIIYRASYFGFY 811 Y+GF ++ + I A GFY Sbjct: 123 YKGFVPTL--LTIVPAMGIGFY 142 Score = 40.3 bits (90), Expect = 0.002 Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 1/97 (1%) Frame = +2 Query: 230 LADSVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRI 409 L ++ F+ GG++ AVS+T P++ V+ +Q ++ + +Y ++ V + Sbjct: 166 LCPELSIIGGFVCGGVAGAVSQTIAYPLDVVRRRMQ---LAGAVPDGHKYNTCINTLVNV 222 Query: 410 PKEQGL-LSFWRGNFANVIRYFPTQALNFAFKDKYKQ 517 K+ G+ +RG N +R P A+ F + KQ Sbjct: 223 YKDDGIRRGLYRGLSINYLRVCPQVAIMFGVYEVTKQ 259 Score = 39.9 bits (89), Expect = 0.003 Identities = 43/193 (22%), Positives = 73/193 (37%), Gaps = 9/193 (4%) Frame = +2 Query: 263 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIP-KEQGLLSFW 439 +AG ++ + P++ V+ ++ Q+A DQ Y I I KE G + + Sbjct: 69 VAGSLAGMTACACTYPLDMVR-----SRLAFQVAQDQGYTTITQTIRCISVKEGGPKALY 123 Query: 440 RGNFANVIRYFPTQALNFAFKDKYKQVFLG------GVDKKTQFWRY-FXXXXXXXXXXX 598 +G ++ P + F + K FL + T Sbjct: 124 KGFVPTLLTIVPAMGIGFYMFETMKAYFLETRIAFTNTNPDTLCPELSIIGGFVCGGVAG 183 Query: 599 XTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLI-GLYRGFGVSVQG 775 S YPLD R R+ DG + ++ N + ++K DG+ GLYRG ++ Sbjct: 184 AVSQTIAYPLDVVRRRMQLAGAVPDGHK-YNTCINTLVNVYKDDGIRRGLYRGLSINYLR 242 Query: 776 IIIYRASYFGFYD 814 + A FG Y+ Sbjct: 243 VCPQVAIMFGVYE 255 >SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) Length = 247 Score = 51.2 bits (117), Expect = 1e-06 Identities = 38/170 (22%), Positives = 76/170 (44%), Gaps = 1/170 (0%) Frame = +2 Query: 254 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 433 ++ +AG + TA P++ +K+ LQ + G +D R K +G+ Sbjct: 71 RNLIAGSVGGVTGVTAGQPLDTIKVRLQASFGA----------GPLDMLARTVKTEGVRG 120 Query: 434 FWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLC 613 ++G A V+ P A++F K++ L +K+ +Y+ + Sbjct: 121 LYKGMLAPVLVAAPVTAVSFYSLSIGKRLQLSDPNKEPTMVQYYNAGVFCG-----VCVS 175 Query: 614 FVYPLDFARTRLAADVGKGDGQR-EFSGLGNCISKIFKSDGLIGLYRGFG 760 F+Y R + V K G + + GLG+C+ +++++ GL G+++G G Sbjct: 176 FIYA-PTERVKCLLQVQKESGTKARYQGLGDCLLQVYRTGGLRGVFKGLG 224 >SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 276 Score = 49.6 bits (113), Expect = 3e-06 Identities = 41/198 (20%), Positives = 85/198 (42%), Gaps = 9/198 (4%) Frame = +2 Query: 260 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAA---------DQRYKGIVDAFVRIP 412 F + GI+A++++ A PI+ K+ LQ+Q S +A+ D Y+G++ V + Sbjct: 18 FCSAGIAASIAEAATIPIDTAKVRLQIQGESAVMASIAQGVRTTHDAHYRGMLGTMVTLF 77 Query: 413 KEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXX 592 K +G+ + ++G + R ++ D+ K ++ G D + Sbjct: 78 KTEGMKTMYKGLIPGIHRQLCFASIRIGLYDQVKAMY-GDTDVQNP---KILKKIAASIT 133 Query: 593 XXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQ 772 ++ P + + R AD G R SG ++I +++G+ GL++G ++ Sbjct: 134 TGIMAVSVAQPTEVVKIRFQADAG-----RYTSGTMGTYAEIARNEGMKGLWKGVFPNMA 188 Query: 773 GIIIYRASYFGFYDTXXG 826 + + YD+ G Sbjct: 189 RLCTVNVTELVVYDSIKG 206 Score = 42.7 bits (96), Expect = 4e-04 Identities = 37/165 (22%), Positives = 62/165 (37%), Gaps = 1/165 (0%) Frame = +2 Query: 263 LAGGISAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 439 +A I+ + +VA P E VK+ Q A + G + + I + +G+ W Sbjct: 128 IAASITTGIMAVSVAQPTEVVKIRFQAD-------AGRYTSGTMGTYAEIARNEGMKGLW 180 Query: 440 RGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLCFV 619 +G F N+ R D K +FL +K F + C Sbjct: 181 KGVFPNMARLCTVNVTELVVYDSIKGLFL----RKQWMADEFPLHFVSAFGAGFVTTCVA 236 Query: 620 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 754 P+D +TR SG+ +C ++FK +G+ Y+G Sbjct: 237 SPVDVVKTRYM----NSPANTYKSGI-DCAVQLFKHNGIFAYYKG 276 >SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 328 Score = 49.2 bits (112), Expect = 4e-06 Identities = 40/171 (23%), Positives = 71/171 (41%) Frame = +2 Query: 254 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 433 K+ +AG + A + P++ +K+ LQ + K YK D F +I + +G+ Sbjct: 40 KNSIAGSAAGAAANLVGFPLDTIKVRLQAMPLPKP-GEPWMYKNSFDCFFKIIRNEGVYY 98 Query: 434 FWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLC 613 +RG ++ P + F+ K L V K + R TS Sbjct: 99 LFRGVTVPILNSIPNTTVLFSCVSFVKSYKLP-VSKDPELLRSLAAGMIAGVA---TSFV 154 Query: 614 FVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVS 766 PLD R + + K G + G +C+ +I++ G+ G+Y+G V+ Sbjct: 155 LT-PLD--RVKCILQIEKAFGGSSYGGPVDCLRRIYREAGVRGVYKGISVT 202 >SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 300 Score = 48.0 bits (109), Expect = 1e-05 Identities = 41/172 (23%), Positives = 71/172 (41%) Frame = +2 Query: 254 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 433 K LAGGI+ + P E VK LQ+ + AA Y+G +D + K G+L Sbjct: 42 KAILAGGIAGGLEICCTFPTEYVKTQLQLD----EKAAKPIYRGPIDCVKKTVKGHGVLG 97 Query: 434 FWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLC 613 +RG + + P ++ FA + K K TQ F ++ Sbjct: 98 LYRGLSSLLYGSVPKASVRFAVFEYLKNKMADENGKLTQ----FQTLASGLGAGVSEAVV 153 Query: 614 FVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSV 769 V P++ + + D + ++ G + + I K++G G+Y+G +V Sbjct: 154 VVCPMETIKVKFIHD--QTQPNPKYKGFFSGVRTILKTEGFFGVYKGLTATV 203 Score = 36.7 bits (81), Expect = 0.024 Identities = 17/69 (24%), Positives = 35/69 (50%) Frame = +2 Query: 608 LCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIY 787 +C +P ++ +T+L D + + + G +C+ K K G++GLYRG + G + Sbjct: 55 ICCTFPTEYVKTQLQLD--EKAAKPIYRGPIDCVKKTVKGHGVLGLYRGLSSLLYGSVPK 112 Query: 788 RASYFGFYD 814 + F ++ Sbjct: 113 ASVRFAVFE 121 >SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 309 Score = 44.8 bits (101), Expect = 9e-05 Identities = 36/168 (21%), Positives = 74/168 (44%) Frame = +2 Query: 251 AKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLL 430 A++ +AG +S + A P++ +K+ LQ + K +KG +D F++ + +GL Sbjct: 21 ARNLIAGSVSGMLGCAAGQPLDLLKVRLQAMNQVKP-GETAPFKGAMDCFMKTVRLEGLR 79 Query: 431 SFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSL 610 ++G + ++ P+ AL F K++ L ++ +Y S Sbjct: 80 GLYKGMLSPLLMATPSTALTFYSLSVGKRIQLSDPYQEPTLVQY---GNAGLFCGFCVSF 136 Query: 611 CFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 754 F P + + L + G + SG + +I+ +G+ G++RG Sbjct: 137 LFA-PAERIKCILQVEAGASGSTQ--SGPYAIVKRIYAEEGVRGIFRG 181 >SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) Length = 95 Score = 44.4 bits (100), Expect = 1e-04 Identities = 24/72 (33%), Positives = 39/72 (54%) Frame = +2 Query: 602 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGII 781 T+ YPLD R RLA K +++GL N ++I++ +G+ YRG+ ++ GI+ Sbjct: 2 TAALLTYPLDMVRARLAITQKK-----KYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIM 56 Query: 782 IYRASYFGFYDT 817 Y F Y+T Sbjct: 57 PYAGISFFTYET 68 Score = 39.1 bits (87), Expect = 0.005 Identities = 16/55 (29%), Positives = 32/55 (58%) Frame = +2 Query: 359 IAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 523 I ++Y G+++AF RI +++G+ +F+RG +I P ++F + K+ F Sbjct: 19 ITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYETCKKAF 73 >SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) Length = 1026 Score = 43.6 bits (98), Expect = 2e-04 Identities = 23/83 (27%), Positives = 41/83 (49%) Frame = +2 Query: 275 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 454 I A TAV PI+ VK +Q Q + A++ YK +D F ++ + +G + +RG Sbjct: 922 IKKATGATAVYPIDLVKTRMQNQRAV--LEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLP 979 Query: 455 NVIRYFPTQALNFAFKDKYKQVF 523 ++ P +A+ D + +F Sbjct: 980 QLLGVSPEKAIKLTTNDFVRGIF 1002 Score = 39.1 bits (87), Expect = 0.005 Identities = 17/59 (28%), Positives = 31/59 (52%) Frame = +2 Query: 602 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGI 778 T VYP+D +TR+ + ++ + +C K+ +++G IGLYRG + G+ Sbjct: 926 TGATAVYPIDLVKTRMQNQRAVLEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLLGV 984 >SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 1024 Score = 43.2 bits (97), Expect = 3e-04 Identities = 43/186 (23%), Positives = 78/186 (41%), Gaps = 1/186 (0%) Frame = +2 Query: 215 NKMSNLADSVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVD 394 NK L + + I+A ++ T P+ +K LQ+++ A+ +K + Sbjct: 823 NKSGALGKADGSLIHMTSSAIAAFINHTVTNPLWFIKTRLQLENQGGTRAS--AFKIVSM 880 Query: 395 AFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLG-GVDKKTQFWRYFXX 571 A+ K +G+ +F+RG A+ + T ++F ++ K L + F Sbjct: 881 AY----KAEGIRAFYRGLTASYVGISET-VVHFTIYERLKAELLKLHYKSRRDFHVVECM 935 Query: 572 XXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYR 751 TSLC YP + ARTRL + G++++ + + + +G GLY Sbjct: 936 LAAGISKCIATSLC--YPHEVARTRLRQQESEFLGRQKYRSFFQTLGTVLREEGWRGLYG 993 Query: 752 GFGVSV 769 G G V Sbjct: 994 GLGTHV 999 Score = 33.1 bits (72), Expect = 0.30 Identities = 14/43 (32%), Positives = 25/43 (58%) Frame = +2 Query: 683 EFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFY 811 +FSG+ + K++G+ L++G G ++ G+ RA YF Y Sbjct: 773 KFSGIVPYARYMVKNEGIQSLFKGLGTTLLGVTPSRAIYFAIY 815 Score = 32.3 bits (70), Expect = 0.52 Identities = 20/77 (25%), Positives = 34/77 (44%) Frame = +2 Query: 263 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 442 LA GIS ++ + P E + L+ Q + Q+Y+ + +E+G + Sbjct: 936 LAAGISKCIATSLCYPHEVARTRLRQQE--SEFLGRQKYRSFFQTLGTVLREEGWRGLYG 993 Query: 443 GNFANVIRYFPTQALNF 493 G +VIR P A+ F Sbjct: 994 GLGTHVIRQVPNTAIMF 1010 >SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 611 Score = 42.7 bits (96), Expect = 4e-04 Identities = 23/83 (27%), Positives = 40/83 (48%) Frame = +2 Query: 236 DSVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPK 415 D+++ + F +GGI+ +S P++ VK Q + +Y G D +I Sbjct: 353 DNLSPIRLFFSGGIAGTLSWILTYPVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYI 412 Query: 416 EQGLLSFWRGNFANVIRYFPTQA 484 G+ +F +G A ++R FPT A Sbjct: 413 SGGVSAFGQGLLATILRGFPTNA 435 Score = 39.5 bits (88), Expect = 0.003 Identities = 41/179 (22%), Positives = 71/179 (39%), Gaps = 15/179 (8%) Frame = +2 Query: 263 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIA----------ADQRYKGIVDAFVRIP 412 ++G I+ V P+E K +QVQ +++ Y G +D ++ Sbjct: 249 ISGAIAGGVQSIVCCPMELAKTRVQVQGQGQKLVHVFFLTNTETKQMAYTGSLDCLKKVF 308 Query: 413 KEQGLLSFWRGNFANVIRYFPTQALNF-AFKDKYKQVFLGG--VDKKTQFWRYFXXXXXX 583 +GL +RG R P AL F +F+ + + G VD + +F Sbjct: 309 HSEGLRGCFRGMAITTTRDIPAFALYFGSFQYVCELLTPKGEHVDNLSPIRLFFSGGIAG 368 Query: 584 XXXXXXTSLCFVYPLDFARTRLAAD--VGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 754 T YP+D ++ AD G Q +++G +C+ KI+ S G+ +G Sbjct: 369 TLSWILT-----YPVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFGQG 422 Score = 36.3 bits (80), Expect = 0.032 Identities = 16/45 (35%), Positives = 26/45 (57%) Frame = +2 Query: 677 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFY 811 Q ++G +C+ K+F S+GL G +RG ++ I A YFG + Sbjct: 294 QMAYTGSLDCLKKVFHSEGLRGCFRGMAITTTRDIPAFALYFGSF 338 Score = 33.1 bits (72), Expect = 0.30 Identities = 12/40 (30%), Positives = 24/40 (60%) Frame = +2 Query: 686 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFG 805 ++G+ +C +I K + ++GLY+G + G+ + A FG Sbjct: 191 YNGVFDCFKQIIKRESVLGLYKGMASPLAGLGLINAIIFG 230 >SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 200 Score = 41.5 bits (93), Expect = 8e-04 Identities = 43/193 (22%), Positives = 77/193 (39%), Gaps = 9/193 (4%) Frame = +2 Query: 263 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRI-PKEQGLLSFW 439 +AGG++ + + P++ V+ ++ Q+A + Y GI +I E G+++ + Sbjct: 3 VAGGLAGLTACSCTYPLDIVR-----SRLAFQVADEHTYCGICQTVKQIFMTEGGMVALY 57 Query: 440 RGNFANVIRYFPTQALNFAFKDKYKQVFLG--GV-----DKKTQFWRYFXXXXXXXXXXX 598 RG + P + F + +K F+ GV + + Sbjct: 58 RGFTPTSLSMIPAVGIGFYAFESFKDFFVAMKGVLTRIHPETGETVLTAPGGLLCGALAG 117 Query: 599 XTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGL-IGLYRGFGVSVQG 775 TS YPLD R R+ DG + +S N ++ DG+ GLYRG ++ Sbjct: 118 ATSQTLAYPLDVVRRRMQLAGTVADGHK-YSTCINTFISVYTEDGIRRGLYRGLSINYLR 176 Query: 776 IIIYRASYFGFYD 814 + A F Y+ Sbjct: 177 VCPQVAVMFAVYE 189 >SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) Length = 577 Score = 41.1 bits (92), Expect = 0.001 Identities = 23/61 (37%), Positives = 34/61 (55%) Frame = +2 Query: 263 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 442 L G S ++ V P E +K L VQHV+K A YKG+ A I +E+G+L+ ++ Sbjct: 426 LVGTSSTLIAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYK 482 Query: 443 G 445 G Sbjct: 483 G 483 >SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) Length = 773 Score = 40.7 bits (91), Expect = 0.001 Identities = 15/44 (34%), Positives = 29/44 (65%) Frame = +2 Query: 683 EFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 814 ++SG+G ++KI++ +GL G ++G G ++ I+ Y A F Y+ Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYE 633 Score = 39.9 bits (89), Expect = 0.003 Identities = 14/48 (29%), Positives = 30/48 (62%) Frame = +2 Query: 374 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 517 +Y G+ +I +++GL +++GN N++R P A+ FA +++K+ Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKK 637 Score = 35.1 bits (77), Expect = 0.073 Identities = 16/45 (35%), Positives = 27/45 (60%) Frame = +2 Query: 620 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 754 YPLD R R+ + +G+G ++S + I +S+G IGL++G Sbjct: 700 YPLDVVRRRMQME--RGEGMFKYSSTWDGFKVIVRSEGFIGLFKG 742 >SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 179 Score = 39.5 bits (88), Expect = 0.003 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%) Frame = +2 Query: 269 GGISAAVSKTAVAPIERVKLLLQVQ---HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 439 G +S +SK + P + +K +QVQ + Q+Y G+ D F I KE+G + + Sbjct: 36 GALSGMISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCFRTILKEEGAMGLF 95 Query: 440 RG 445 +G Sbjct: 96 KG 97 >SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 313 Score = 39.5 bits (88), Expect = 0.003 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%) Frame = +2 Query: 620 YPLDFARTRLAADVGKGDGQRE-FSGLGNCISKIFKSDGLIGLYRGFGVSVQGII-IYRA 793 +PLD + RL G++ F+G +C K +++G GLY+G + G+ I+ Sbjct: 45 HPLDTIKVRLQTMPRPKPGEKPMFTGTFDCAMKTIRNEGFFGLYKGMAAPITGVTPIFAI 104 Query: 794 SYFGF 808 ++GF Sbjct: 105 CFWGF 109 Score = 29.5 bits (63), Expect = 3.6 Identities = 18/80 (22%), Positives = 32/80 (40%) Frame = +2 Query: 254 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 433 K+F AGG P++ +K+ LQ K + G D ++ + +G Sbjct: 28 KNFFAGGFGGVCCIATGHPLDTIKVRLQTMPRPKP-GEKPMFTGTFDCAMKTIRNEGFFG 86 Query: 434 FWRGNFANVIRYFPTQALNF 493 ++G A + P A+ F Sbjct: 87 LYKGMAAPITGVTPIFAICF 106 >SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 203 Score = 38.7 bits (86), Expect = 0.006 Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 2/97 (2%) Frame = +2 Query: 263 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 442 LAG + A+ PIE +K LQ+ Y+G++ + KE+G+ +F+R Sbjct: 2 LAGACATVFHDGAMNPIEVIKQRLQMY--------GSPYRGVIHCATSVFKEEGIRAFYR 53 Query: 443 GNFANVIRYFPTQALNFAFKDKYKQVF--LGGVDKKT 547 + P Q L+F + ++ LGG D KT Sbjct: 54 SYTTQLSMNIPFQTLHFTVYEYARKALNPLGGYDPKT 90 Score = 28.7 bits (61), Expect = 6.4 Identities = 10/43 (23%), Positives = 23/43 (53%) Frame = +2 Query: 686 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 814 + G+ +C + +FK +G+ YR + + I ++ +F Y+ Sbjct: 32 YRGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPFQTLHFTVYE 74 >SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 266 Score = 38.7 bits (86), Expect = 0.006 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = +2 Query: 389 VDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFW 556 +DA ++IP+ +GL S WRG ++ P + F D+ K + G + +T W Sbjct: 64 IDALIKIPRYEGLSSLWRGLPPTMVMAVPNTVIYFTLYDQLK-ISYGFKNNETNLW 118 >SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 434 Score = 38.3 bits (85), Expect = 0.008 Identities = 38/169 (22%), Positives = 72/169 (42%) Frame = +2 Query: 260 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 439 F++G + V+ + P++ V+ L VQ +S + ++ Y GIV A RI E+G+ + Sbjct: 32 FVSGATAGVVATASTHPLDVVRARLTVQDMSTRSISN--YTGIVSALRRIHIEEGIRGLY 89 Query: 440 RGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLCFV 619 +G +++ P + + D K L +D + F + V Sbjct: 90 KGLVPSLVSIAPFLGVQQSVYDIMK---LRALD--SAFAANSGTFLVCGAIAGMIAQTVV 144 Query: 620 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVS 766 +PLD R ++ D G+ + S + + ++K G +Y G S Sbjct: 145 HPLDVVRRQMQVDRGRSGSITQTS--LSALKILWKQGGPRRIYAGLTAS 191 Score = 31.5 bits (68), Expect = 0.90 Identities = 17/65 (26%), Positives = 29/65 (44%) Frame = +2 Query: 620 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASY 799 +PLD R RL ++G+ + + +I +G+ GLY+G S+ I + Sbjct: 47 HPLDVVRARLTVQDMSTRSISNYTGIVSALRRIHIEEGIRGLYKGLVPSLVSIAPFLGVQ 106 Query: 800 FGFYD 814 YD Sbjct: 107 QSVYD 111 >SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) Length = 302 Score = 37.9 bits (84), Expect = 0.010 Identities = 17/51 (33%), Positives = 30/51 (58%) Frame = +2 Query: 602 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 754 T+ V PLD +TRL + + G+ ++G+ +C KI+ ++GL Y+G Sbjct: 218 TASVAVNPLDVIKTRLQL-LNRPQGEPNYNGIIDCAKKIYSNEGLAAFYKG 267 Score = 34.7 bits (76), Expect = 0.097 Identities = 19/70 (27%), Positives = 36/70 (51%) Frame = +2 Query: 266 AGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 445 AG ++ + AV P++ +K LQ+ + + + Y GI+D +I +GL +F++G Sbjct: 211 AGCLAGMTASVAVNPLDVIKTRLQLLNRPQ---GEPNYNGIIDCAKKIYSNEGLAAFYKG 267 Query: 446 NFANVIRYFP 475 +I P Sbjct: 268 AVPRMIVIAP 277 >SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) Length = 868 Score = 37.5 bits (83), Expect = 0.014 Identities = 32/145 (22%), Positives = 58/145 (40%), Gaps = 3/145 (2%) Frame = +2 Query: 308 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 487 PI+ K +QVQ + Q A +Y+ + A I + G+ ++G A ++R P Sbjct: 221 PIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQGLSATLVRNIPANGF 280 Query: 488 NFAFKDKYKQVFL---GGVDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAAD 658 F F + K + G V+ + T YP D ++ + AD Sbjct: 281 FFGFYEFTKNLLTPEGGTVNDVSPLGLLTSGAMGGFFYWFLT-----YPTDLVKSSMMAD 335 Query: 659 VGKGDGQREFSGLGNCISKIFKSDG 733 R++ G +C K++ ++G Sbjct: 336 -HSDKALRKYHGYIDCARKLYTNEG 359 >SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) Length = 233 Score = 37.1 bits (82), Expect = 0.018 Identities = 43/185 (23%), Positives = 70/185 (37%), Gaps = 4/185 (2%) Frame = +2 Query: 308 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 487 P +K+ LQVQ + Y G +DAF ++ + +G+ ++G + F Q Sbjct: 35 PANLIKIRLQVQRKTTL------YNGSLDAFTKVIRTEGVRGLYKGYLVSCAGLFAGQ-- 86 Query: 488 NFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGK 667 + Y+ V KT + Y P+D +L G+ Sbjct: 87 --CYITTYEL-----VRSKTAQYNYTIRGFLAGGCASIVGQTITVPVDIISQKLMIQ-GQ 138 Query: 668 GDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQ----GIIIYRASYFGFYDTXXGHAA 835 GD + + G I + F G G Y+G+ S+ I+ ASY GFY G+ + Sbjct: 139 GDRKVKLKGARILIRETFHQHGPGGFYKGYFASLMTYAPSSAIWWASY-GFYTGVIGNLS 197 Query: 836 RP*XH 850 H Sbjct: 198 ADGTH 202 Score = 35.5 bits (78), Expect = 0.055 Identities = 33/132 (25%), Positives = 54/132 (40%) Frame = +2 Query: 254 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 433 + FLAGG ++ V +T P++ + L +Q Q + KG + G Sbjct: 107 RGFLAGGCASIVGQTITVPVDIISQKLMIQ---GQGDRKVKLKGARILIRETFHQHGPGG 163 Query: 434 FWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLC 613 F++G FA+++ Y P+ A+ +A Y V +G + T+ Sbjct: 164 FYKGYFASLMTYAPSSAIWWASYGFYTGV-IGNL--SADGTHRLLVLGSSGVLAGVTAAT 220 Query: 614 FVYPLDFARTRL 649 PLD RTRL Sbjct: 221 LTNPLDVIRTRL 232 >SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 796 Score = 33.9 bits (74), Expect = 0.17 Identities = 15/38 (39%), Positives = 25/38 (65%) Frame = +2 Query: 407 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 520 +P+E L W G F++VI F A+N AF+++YK++ Sbjct: 272 LPREVYLFYSWIGAFSSVINPFIYGAMNPAFREEYKKI 309 >SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 214 Score = 32.7 bits (71), Expect = 0.39 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Frame = +2 Query: 266 AGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYK-GIVDAFVRIPKEQGLLSFWR 442 AG +A + P E +K LQ QH + I+ K G++D ++I + G +R Sbjct: 112 AGSGAAFFMSFVLCPAELIKCRLQAQHQTNLISGMAGPKSGVIDVTMQIIRNDGFQGLFR 171 Query: 443 GNFANVIRYFP 475 G A R P Sbjct: 172 GMTATWAREVP 182 >SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 213 Score = 32.3 bits (70), Expect = 0.52 Identities = 14/38 (36%), Positives = 24/38 (63%) Frame = +2 Query: 407 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 520 +P+E +L W G ++VI F A+N F+D+YK++ Sbjct: 139 LPREVYVLYTWLGTLSSVINPFIYGAMNPVFRDEYKKL 176 >SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26) Length = 205 Score = 32.3 bits (70), Expect = 0.52 Identities = 19/66 (28%), Positives = 30/66 (45%) Frame = +2 Query: 617 VYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRAS 796 V PLD + R+ D +++ + N K DG+ GL RG+ + G + Sbjct: 73 VVPLDLVKCRIQVD------PKKYGSMVNGFKITLKEDGVRGLARGWAPTFIGYSMQGLG 126 Query: 797 YFGFYD 814 FGFY+ Sbjct: 127 KFGFYE 132 >SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061) Length = 114 Score = 31.9 bits (69), Expect = 0.68 Identities = 17/57 (29%), Positives = 30/57 (52%) Frame = +2 Query: 272 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 442 G+S +KT AP+ER+K+L Q Q+ + + A I K++GL +++ Sbjct: 63 GLSTCCAKTTTAPLERLKILFQAQN------KHYKNMSVFGALKAIYKKEGLQGYYK 113 >SB_41780| Best HMM Match : Mito_carr (HMM E-Value=3.9e-05) Length = 383 Score = 31.5 bits (68), Expect = 0.90 Identities = 10/29 (34%), Positives = 18/29 (62%) Frame = +2 Query: 701 NCISKIFKSDGLIGLYRGFGVSVQGIIIY 787 +C I++ +G+ G YRGFG + ++Y Sbjct: 332 DCFRTIYQQEGIFGFYRGFGALLIQCVVY 360 >SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14) Length = 553 Score = 30.7 bits (66), Expect = 1.6 Identities = 18/53 (33%), Positives = 29/53 (54%) Frame = +2 Query: 290 SKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 448 S+ VA ER +L+ Q Q +D RY+G +D+F + +G L +RG+ Sbjct: 278 SRQTVACPERCGVLMASQGKRGQYMSDARYRGHLDSFRGDARYRGHLDSFRGD 330 >SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17) Length = 187 Score = 30.7 bits (66), Expect = 1.6 Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 1/71 (1%) Frame = +2 Query: 254 KDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLL 430 K+F+ G +A+ + P+E VK +Q+Q + + Y+ + A I K +G+L Sbjct: 6 KEFVLGATAASGACFFTNPLEVVKTRMQLQGELKSRGTYSVYYRNVFHASYTIAKYEGIL 65 Query: 431 SFWRGNFANVI 463 + +G F +I Sbjct: 66 AMQKGLFPALI 76 >SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) Length = 765 Score = 29.9 bits (64), Expect = 2.8 Identities = 27/99 (27%), Positives = 38/99 (38%) Frame = -1 Query: 659 HRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRSNARTASSCQRRRGTPACTCP*RRS*AP 480 HR+ + RSR R R+ R R +SSC+RRR P R + Sbjct: 275 HRKHRSHSRSRSPRSKRSRSPRKRRRSKSRSPRRYRDSSSCRRRRSRSRSRSPKSRLRSR 334 Query: 479 GSGST**RWRSYHARMKGDPAPWGCARRRRRYPCNAGRR 363 R+RS +G + + RRRR + RR Sbjct: 335 SRSPYRIRYRSRSRPPRGRRSQ---SPRRRRTRSRSRRR 370 >SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21) Length = 198 Score = 29.9 bits (64), Expect = 2.8 Identities = 10/24 (41%), Positives = 18/24 (75%) Frame = +2 Query: 266 AGGISAAVSKTAVAPIERVKLLLQ 337 AGG++ S+T AP+E++K++ Q Sbjct: 175 AGGVAGVASRTLTAPLEKMKIIAQ 198 >SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039) Length = 54 Score = 29.9 bits (64), Expect = 2.8 Identities = 12/46 (26%), Positives = 23/46 (50%) Frame = +2 Query: 383 GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 520 G+V + G +RGN A ++R P ++ F ++YK++ Sbjct: 1 GVVHVLTQTYTTNGFTGLFRGNSATMMRVVPYASIQFTSHEQYKKL 46 >SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 226 Score = 29.5 bits (63), Expect = 3.6 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Frame = +1 Query: 328 AAPSTARQQADRRRPALQGYRRR-LRAHPQGAGSP 429 A+ S RQQ R RP +GY +R R +P+ SP Sbjct: 83 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 117 >SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 706 Score = 29.5 bits (63), Expect = 3.6 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Frame = +1 Query: 328 AAPSTARQQADRRRPALQGYRRR-LRAHPQGAGSP 429 A+ S RQQ R RP +GY +R R +P+ SP Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 217 >SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 166 Score = 29.5 bits (63), Expect = 3.6 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Frame = -1 Query: 659 HRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRSNARTAS-SC 537 + RD RS+ +R++ RWL R R+P S+ R++S SC Sbjct: 6 NNNRDN-TRSQVRSRNSNRWLLRQQRQPQRHLSHKRSSSNSC 46 >SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) Length = 2411 Score = 29.5 bits (63), Expect = 3.6 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = -1 Query: 569 QRSNARTASSCQRRRGTPACTCP 501 Q + R S CQRRRG C CP Sbjct: 934 QLVSCRFYSKCQRRRGGAQCVCP 956 >SB_43597| Best HMM Match : TP2 (HMM E-Value=1.7) Length = 272 Score = 29.5 bits (63), Expect = 3.6 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = -3 Query: 696 RPENSRWPSPLPTSAARRVRAKSRGYTK 613 RP +SR S P+SA+RR ++SRG + Sbjct: 221 RPSSSRPSSARPSSASRRASSRSRGLAR 248 >SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018) Length = 404 Score = 29.5 bits (63), Expect = 3.6 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Frame = +1 Query: 328 AAPSTARQQADRRRPALQGYRRR-LRAHPQGAGSP 429 A+ S RQQ R RP +GY +R R +P+ SP Sbjct: 261 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 295 >SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012) Length = 550 Score = 29.1 bits (62), Expect = 4.8 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Frame = +1 Query: 328 AAPSTARQQADRRRPALQGYRRR-LRAHPQGAGSP 429 A+ S RQQ R RP GY +R R +P+ SP Sbjct: 84 ASGSNQRQQQARGRPQASGYNQRSRRGYPRARASP 118 >SB_31266| Best HMM Match : PKI (HMM E-Value=1) Length = 1507 Score = 28.7 bits (61), Expect = 6.4 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = -3 Query: 783 MMIPCTDTPKPLYRPIRPSDLKILLMQ 703 +++PC P LYR +RP L+I + Q Sbjct: 587 IILPCPSDPCSLYRELRPQALQIQMSQ 613 >SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 866 Score = 28.7 bits (61), Expect = 6.4 Identities = 12/39 (30%), Positives = 23/39 (58%) Frame = +2 Query: 410 PKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 526 P+E L W G ++VI F +N F++++K+++L Sbjct: 815 PRELYLFYSWLGALSSVINPFIYGVMNPMFREEFKRIYL 853 >SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1277 Score = 28.3 bits (60), Expect = 8.4 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Frame = -1 Query: 650 RDGYVRSRGGTRSTERWLRRHHRRPDY-QRSNARTASSCQR 531 +DG V +RG TR + R H RR + R + R +S+ R Sbjct: 591 QDGQVTTRGHTRRSSNTTRSHTRRSSHTTRGHTRRSSNTTR 631 >SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28) Length = 343 Score = 28.3 bits (60), Expect = 8.4 Identities = 14/39 (35%), Positives = 24/39 (61%) Frame = +2 Query: 407 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 523 +P+E L + G ++VI F A+N F+++YK+VF Sbjct: 263 LPRELYFLYTYVGVLSSVINPFIYGAMNPMFREEYKKVF 301 >SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40) Length = 368 Score = 28.3 bits (60), Expect = 8.4 Identities = 13/38 (34%), Positives = 24/38 (63%) Frame = +2 Query: 407 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 520 +P+E +L + G ++VI F A+N FK++YK++ Sbjct: 267 LPREVYVLYSFLGGLSSVINPFIYGAMNPIFKEQYKKI 304 >SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) Length = 2049 Score = 28.3 bits (60), Expect = 8.4 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Frame = -1 Query: 656 RRRDGYVRSRGGTRSTERWLRRHHR-RPDYQRSNARTASSCQRRRGTP 516 R+ + R +GG R+T+ ++H R +PD +R+ R R+GTP Sbjct: 865 RKVEERARHKGGNRATQEREKKHRRNQPDKRRTQMRIP-----RKGTP 907 >SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018) Length = 406 Score = 28.3 bits (60), Expect = 8.4 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Frame = +1 Query: 328 AAPSTARQQADRRRPALQGYRRR-LRAHPQGAGSP 429 A+ S RQQ R RP +GY +R R +P+ +P Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARATP 217 >SB_18153| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=5) Length = 237 Score = 28.3 bits (60), Expect = 8.4 Identities = 22/112 (19%), Positives = 49/112 (43%) Frame = +2 Query: 188 IHLVKIT*SNKMSNLADSVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAA 367 I +K S + ++A V+ + + + +K+A +K+L + + Q+ Sbjct: 7 IDSLKFEISESIKDVAKQVSNLSNKVTSEFKSVKNKSASTAETILKILGDLGEIKDQLLK 66 Query: 368 DQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 523 + + + D+ R K G+ + R N ++ ++Y PT N + K +F Sbjct: 67 TE--ETVADS-TRYKKSGGIAVYIRENISSGVKYIPTDNENVLWVKVCKNIF 115 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 24,742,579 Number of Sequences: 59808 Number of extensions: 509298 Number of successful extensions: 2103 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 1884 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2072 length of database: 16,821,457 effective HSP length: 81 effective length of database: 11,977,009 effective search space used: 2431332827 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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