Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_E11
         (847 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   4.0  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   4.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.3  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
 Frame = -3

Query: 392 PRLVTPDDSLHGEVIVDYLLVY--RGTC*NRRHSAARWHE 279
           P +V P   L  EV+  YLLVY    TC     + +  HE
Sbjct: 287 PMIVCPIVWLMDEVVEIYLLVYACASTCEQANDTPSILHE 326


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
 Frame = -3

Query: 392 PRLVTPDDSLHGEVIVDYLLVY--RGTC*NRRHSAARWHE 279
           P +V P   L  EV+  YLLVY    TC     + +  HE
Sbjct: 287 PMIVCPIVWLMDEVVEIYLLVYACASTCEQANDTPSILHE 326


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
 Frame = +2

Query: 668 PGNNATGSDSAW-SH 709
           PGN+A+   SAW SH
Sbjct: 351 PGNSASNRHSAWQSH 365


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,799
Number of Sequences: 336
Number of extensions: 4504
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23348025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)