Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_E11
(847 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039040-6|AAB94185.2| 1029|Caenorhabditis elegans Hypothetical ... 169 2e-42
Z54284-1|CAA91059.1| 2198|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z81017-3|CAB54257.1| 629|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81017-2|CAB02672.1| 578|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81017-1|CAB02669.1| 592|Caenorhabditis elegans Hypothetical pr... 29 3.1
X53156-1|CAA37312.1| 356|Caenorhabditis elegans G-protein a-2 p... 29 3.1
U80221-1|AAB38367.1| 579|Caenorhabditis elegans F58A3.1b protein. 29 3.1
U80220-1|AAB38366.1| 592|Caenorhabditis elegans F58A3.1a protein. 29 3.1
U41996-6|AAA83475.1| 356|Caenorhabditis elegans G protein, alph... 29 3.1
AY008125-1|AAG32078.1| 356|Caenorhabditis elegans heterotrimeri... 29 3.1
Z81028-3|CAB02691.1| 545|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z78201-4|CAB01590.2| 911|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z78019-10|CAE46691.1| 911|Caenorhabditis elegans Hypothetical p... 28 7.3
Z73910-4|CAA98136.1| 662|Caenorhabditis elegans Hypothetical pr... 28 9.6
AF106583-1|AAM15569.1| 183|Caenorhabditis elegans Hypothetical ... 28 9.6
AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily a... 28 9.6
>AF039040-6|AAB94185.2| 1029|Caenorhabditis elegans Hypothetical
protein T22B11.5 protein.
Length = 1029
Score = 169 bits (412), Expect = 2e-42
Identities = 95/220 (43%), Positives = 128/220 (58%), Gaps = 3/220 (1%)
Frame = +3
Query: 24 KPQTAAVSVNANRLKSSTAA---EPFLNGSSSAYVETMYNAWLADPNSVHASWDAFFRNA 194
K +A ++ +R +S AA EPFLNGSSS Y+E MY AWL DP+SVH SWDA+FRN
Sbjct: 26 KSHISASTLVQHRNQSVAAAVKHEPFLNGSSSIYIEQMYEAWLQDPSSVHTSWDAYFRNV 85
Query: 195 TNGAQPGAAYTPPPNLAPYNKNEVPLTSLVPSSGGMPSISAGSPINEKIIDDHLAVQAII 374
GA PG A+ PP A V + ++ P+ + + + I DHL +Q +I
Sbjct: 86 EAGAGPGQAFQAPPATAYAGALGVSPAAAQVTTSSAPATRLDTNASVQSISDHLKIQLLI 145
Query: 375 RSYQSRGHLVAQLDPLGISTGDPVSSADWHGGMRAFANEAVIRQHVRFDEADMDRVFKLP 554
RSYQ+RGH +A LDPLGI++ D + + + E D+DR F LP
Sbjct: 146 RSYQTRGHNIADLDPLGINSADLDDTIPPELELSFYG----------LGERDLDREFLLP 195
Query: 555 STTFIGEKEKALPLREILNRLEQAYCNNIGIEFMFINSLE 674
TTFI EK K+L LREIL RL+ YC + G+E+M +N+LE
Sbjct: 196 PTTFISEK-KSLTLREILQRLKDIYCTSTGVEYMHLNNLE 234
Score = 55.2 bits (127), Expect = 6e-08
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = +1
Query: 673 KQCNWIRQRMEPPNVTKMNADQKRLILARLTRSTGFENFLAKNGP 807
+Q +WIR+R E P VT+++ DQK+++ RL RST FE FLAK P
Sbjct: 234 EQQDWIRRRFEAPRVTELSHDQKKVLFKRLIRSTKFEEFLAKKWP 278
>Z54284-1|CAA91059.1| 2198|Caenorhabditis elegans Hypothetical
protein D2085.1 protein.
Length = 2198
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +3
Query: 114 YVETMYNAWLADPNSVHASWDAFFRNATNGAQPGAAYTPPP 236
Y+ + + + DP+S+ A W A F N + G ++ P
Sbjct: 292 YITSQNHGYAVDPDSLPADWKALFTNENDKTNEGIVHSSKP 332
>Z81017-3|CAB54257.1| 629|Caenorhabditis elegans Hypothetical
protein F58A3.1c protein.
Length = 629
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +3
Query: 228 PPPNLAPYN-KNEVPLTSLVPSSGGMP 305
PPPNL P+ N++P + + P G MP
Sbjct: 529 PPPNLPPHTMSNQMPNSRMPPMQGQMP 555
>Z81017-2|CAB02672.1| 578|Caenorhabditis elegans Hypothetical
protein F58A3.1b protein.
Length = 578
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +3
Query: 228 PPPNLAPYN-KNEVPLTSLVPSSGGMP 305
PPPNL P+ N++P + + P G MP
Sbjct: 478 PPPNLPPHTMSNQMPNSRMPPMQGQMP 504
>Z81017-1|CAB02669.1| 592|Caenorhabditis elegans Hypothetical
protein F58A3.1a protein.
Length = 592
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +3
Query: 228 PPPNLAPYN-KNEVPLTSLVPSSGGMP 305
PPPNL P+ N++P + + P G MP
Sbjct: 492 PPPNLPPHTMSNQMPNSRMPPMQGQMP 518
>X53156-1|CAA37312.1| 356|Caenorhabditis elegans G-protein a-2
protein.
Length = 356
Score = 29.5 bits (63), Expect = 3.1
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Frame = +3
Query: 396 HLVAQLDPLGISTGDPVSSADWHGGMRAFANEAVIRQHVRFDEAD-MDRVFKLPSTTFIG 572
HLV + G++ DP+ D H M + + ++ + D AD +++++K P +
Sbjct: 83 HLVKAMPAAGLNFSDPMREHDVH--MLTLYIKDMQHKNFQQDAADHVEKLWKDPVVKRLY 140
Query: 573 EKEKALPLREILNRLEQAYCN--NIGIEFMFINSLETMQLDPTAHGATE 713
+ K L +R+I + E + N I E N+ +T+ L G E
Sbjct: 141 AERKELNIRDIGDNTEYFFENLPRISKEDYHPNATDTLLLRTKTTGIVE 189
>U80221-1|AAB38367.1| 579|Caenorhabditis elegans F58A3.1b protein.
Length = 579
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +3
Query: 228 PPPNLAPYN-KNEVPLTSLVPSSGGMP 305
PPPNL P+ N++P + + P G MP
Sbjct: 479 PPPNLPPHTMSNQMPNSRMPPMQGQMP 505
>U80220-1|AAB38366.1| 592|Caenorhabditis elegans F58A3.1a protein.
Length = 592
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +3
Query: 228 PPPNLAPYN-KNEVPLTSLVPSSGGMP 305
PPPNL P+ N++P + + P G MP
Sbjct: 492 PPPNLPPHTMSNQMPNSRMPPMQGQMP 518
>U41996-6|AAA83475.1| 356|Caenorhabditis elegans G protein, alpha
subunit protein 2 protein.
Length = 356
Score = 29.5 bits (63), Expect = 3.1
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Frame = +3
Query: 396 HLVAQLDPLGISTGDPVSSADWHGGMRAFANEAVIRQHVRFDEAD-MDRVFKLPSTTFIG 572
HLV + G++ DP+ D H M + + ++ + D AD +++++K P +
Sbjct: 83 HLVKAMPAAGLNFSDPMREHDVH--MLTLYIKDMQHKNFQQDAADHVEKLWKDPVVKRLY 140
Query: 573 EKEKALPLREILNRLEQAYCN--NIGIEFMFINSLETMQLDPTAHGATE 713
+ K L +R+I + E + N I E N+ +T+ L G E
Sbjct: 141 AERKELNIRDIGDNTEYFFENLPRISKEDYHPNATDTLLLRTKTTGIVE 189
>AY008125-1|AAG32078.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 29.5 bits (63), Expect = 3.1
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Frame = +3
Query: 396 HLVAQLDPLGISTGDPVSSADWHGGMRAFANEAVIRQHVRFDEAD-MDRVFKLPSTTFIG 572
HLV + G++ DP+ D H M + + ++ + D AD +++++K P +
Sbjct: 83 HLVKAMPAAGLNFSDPMREHDVH--MLTLYIKDMQHKNFQQDAADHVEKLWKDPVVKRLY 140
Query: 573 EKEKALPLREILNRLEQAYCN--NIGIEFMFINSLETMQLDPTAHGATE 713
+ K L +R+I + E + N I E N+ +T+ L G E
Sbjct: 141 AERKELNIRDIGDNTEYFFENLPRISKEDYHPNATDTLLLRTKTTGIVE 189
>Z81028-3|CAB02691.1| 545|Caenorhabditis elegans Hypothetical
protein B0365.6 protein.
Length = 545
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/61 (26%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +3
Query: 63 LKSSTAAEPFLNGSSSAYVETMYNAWLAD-PNS-VHASWDAFFRNATNGAQPGAAYTPPP 236
L+ ++A+ + +++ ++ ++ +A+ PN V+ W+A F+ +T+ QP TP P
Sbjct: 371 LQGNSASNQWYTSTTNT-MKVVFRPCIANCPNDGVNYRWEADFKPSTDVTQPPVTVTPNP 429
Query: 237 N 239
N
Sbjct: 430 N 430
>Z78201-4|CAB01590.2| 911|Caenorhabditis elegans Hypothetical
protein ZK836.2 protein.
Length = 911
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 594 LREILNRLEQAYCNNIGIEFMFINSLETMQ 683
L ++ +L YC IEFM IN+ E Q
Sbjct: 105 LHDLAEQLRHIYCGPTAIEFMHINNWEERQ 134
>Z78019-10|CAE46691.1| 911|Caenorhabditis elegans Hypothetical
protein ZK836.2 protein.
Length = 911
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 594 LREILNRLEQAYCNNIGIEFMFINSLETMQ 683
L ++ +L YC IEFM IN+ E Q
Sbjct: 105 LHDLAEQLRHIYCGPTAIEFMHINNWEERQ 134
>Z73910-4|CAA98136.1| 662|Caenorhabditis elegans Hypothetical
protein M117.4 protein.
Length = 662
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +3
Query: 207 QPGAAYTPPPNLAPYNKNEVPLTSLVPSSGGMPSISAGSPINEKI 341
+P A PPP+ AP PL++ VPS+G P SA P ++K+
Sbjct: 161 KPLAKPLPPPSAAP--PPVAPLSAPVPSTGAPP--SAVPPADKKM 201
>AF106583-1|AAM15569.1| 183|Caenorhabditis elegans Hypothetical
protein F23C8.13 protein.
Length = 183
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -2
Query: 240 DWAAACMRRLAELRLSHCGKMHPKTRVRSLGRRAMHCTWSR 118
D + MRR + RLS C + +TR GR + T SR
Sbjct: 73 DGESVMMRRRRQARLSMCNEQREQTRHVVSGRATLRMTSSR 113
>AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily
assigned gene nameprotein 168 protein.
Length = 1347
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 108 SAYVETMYNAWLAD-PNSVHASWDAFFRNATNGAQPGA 218
++Y + N+ PNS H+ + F R+A+ GAQP A
Sbjct: 635 TSYAANLQNSMQQSAPNSGHSGYATFDRSASLGAQPQA 672
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,930,822
Number of Sequences: 27780
Number of extensions: 433336
Number of successful extensions: 1501
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1500
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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