BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_E11 (847 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g55410.1 68416.m06154 2-oxoglutarate dehydrogenase E1 compone... 65 4e-21 At5g65750.1 68418.m08274 2-oxoglutarate dehydrogenase E1 compone... 63 2e-20 At1g51820.1 68414.m05841 leucine-rich repeat protein kinase, put... 36 0.026 At2g31400.1 68415.m03837 pentatricopeptide (PPR) repeat-containi... 36 0.045 At1g49100.1 68414.m05505 leucine-rich repeat protein kinase, put... 34 0.10 At3g21340.1 68416.m02695 leucine-rich repeat protein kinase, put... 32 0.42 At1g51830.1 68414.m05843 leucine-rich repeat protein kinase, put... 31 0.73 At5g20230.1 68418.m02408 plastocyanin-like domain-containing pro... 30 1.7 At2g43410.1 68415.m05395 RNA recognition motif (RRM)-containing ... 30 2.2 At1g64450.1 68414.m07306 proline-rich family protein contains pr... 30 2.2 At3g24550.1 68416.m03083 protein kinase family protein contains ... 29 3.9 At1g51805.1 68414.m05838 leucine-rich repeat protein kinase, put... 29 3.9 At4g08390.2 68417.m01386 L-ascorbate peroxidase, stromal (sAPX) ... 29 5.1 At4g08390.1 68417.m01385 L-ascorbate peroxidase, stromal (sAPX) ... 29 5.1 At3g01180.1 68416.m00023 glycogen synthase, putative similar to ... 29 5.1 At2g15530.2 68415.m01778 zinc finger (C3HC4-type RING finger) fa... 29 5.1 At2g15530.1 68415.m01777 zinc finger (C3HC4-type RING finger) fa... 29 5.1 At1g20110.1 68414.m02516 zinc finger (FYVE type) family protein ... 29 5.1 At1g11820.1 68414.m01358 glycosyl hydrolase family 17 protein si... 28 6.8 At5g57710.1 68418.m07214 heat shock protein-related contains sim... 28 9.0 At3g09000.1 68416.m01053 proline-rich family protein 28 9.0 >At3g55410.1 68416.m06154 2-oxoglutarate dehydrogenase E1 component, putative / oxoglutarate decarboxylase, putative / alpha-ketoglutaric dehydrogenase, putative similar to SP|P20967 2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) {Saccharomyces cerevisiae}; contains Pfam profiles PF02779: Transketolase, pyridine binding domain, PF00676: Dehydrogenase E1 component Length = 1017 Score = 64.9 bits (151), Expect(2) = 4e-21 Identities = 44/121 (36%), Positives = 63/121 (52%), Gaps = 4/121 (3%) Frame = +3 Query: 312 SAGSP-INEKIIDDHLAVQAIIRSYQSRGHLVAQLDPLGISTGDPVSSADWHGGMRAFAN 488 +A SP I+ + I + + + ++R+YQ GH+ A+LDPLG+ + D + + Sbjct: 104 AATSPGISGQTIQESMRLLLLVRAYQVNGHMKAKLDPLGLEQREIPEDLD----LALYG- 158 Query: 489 EAVIRQHVRFDEADMDRVFKL---PSTTFIGEKEKALPLREILNRLEQAYCNNIGIEFMF 659 F EAD+DR F L + F+ E LR IL RLEQAYC NIG E+M Sbjct: 159 ---------FTEADLDREFFLGVWQMSGFMSENRPVQTLRSILTRLEQAYCGNIGFEYMH 209 Query: 660 I 662 I Sbjct: 210 I 210 Score = 54.4 bits (125), Expect(2) = 4e-21 Identities = 23/40 (57%), Positives = 28/40 (70%) Frame = +3 Query: 72 STAAEPFLNGSSSAYVETMYNAWLADPNSVHASWDAFFRN 191 S + FL+G+SS Y+E + AW ADPNSV SWD FFRN Sbjct: 60 SKLTDSFLDGTSSVYLEELQRAWEADPNSVDESWDNFFRN 99 Score = 47.6 bits (108), Expect = 1e-05 Identities = 19/40 (47%), Positives = 29/40 (72%) Frame = +1 Query: 676 QCNWIRQRMEPPNVTKMNADQKRLILARLTRSTGFENFLA 795 +CNW+R+++E P + N +++ +IL RL ST FENFLA Sbjct: 215 KCNWLREKIETPTPWRYNRERREVILDRLAWSTQFENFLA 254 >At5g65750.1 68418.m08274 2-oxoglutarate dehydrogenase E1 component, putative / oxoglutarate decarboxylase, putative / alpha-ketoglutaric dehydrogenase, putative similar to SP|P20967 2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) {Saccharomyces cerevisiae}; contains Pfam profiles PF02779: Transketolase, pyridine binding domain, PF00676: Dehydrogenase E1 component Length = 1025 Score = 62.9 bits (146), Expect(2) = 2e-20 Identities = 45/125 (36%), Positives = 63/125 (50%), Gaps = 3/125 (2%) Frame = +3 Query: 297 GMPSISAGSPINEKIIDDHLAVQAIIRSYQSRGHLVAQLDPLGISTGDPVSSADWHGGMR 476 G S S G I+ + I + + + ++R+YQ GH+ A+LDPLG+ + D G+ Sbjct: 105 GQASTSPG--ISGQTIQESMRLLLLVRAYQVNGHMKAKLDPLGLEKRE--IPEDLTPGLY 160 Query: 477 AFANEAVIRQHVRFDEADMDRVFKLP---STTFIGEKEKALPLREILNRLEQAYCNNIGI 647 F EAD+DR F L + F+ E LR IL+RLEQAYC IG Sbjct: 161 GFT------------EADLDREFFLGVWRMSGFLSENRPVQTLRSILSRLEQAYCGTIGY 208 Query: 648 EFMFI 662 E+M I Sbjct: 209 EYMHI 213 Score = 54.4 bits (125), Expect(2) = 2e-20 Identities = 23/40 (57%), Positives = 28/40 (70%) Frame = +3 Query: 72 STAAEPFLNGSSSAYVETMYNAWLADPNSVHASWDAFFRN 191 S + FL+G+SS Y+E + AW ADPNSV SWD FFRN Sbjct: 63 SKLTDSFLDGTSSVYLEELQRAWEADPNSVDESWDNFFRN 102 Score = 47.2 bits (107), Expect = 1e-05 Identities = 19/40 (47%), Positives = 29/40 (72%) Frame = +1 Query: 676 QCNWIRQRMEPPNVTKMNADQKRLILARLTRSTGFENFLA 795 +CNW+R ++E P + N++++ +I RLT ST FENFLA Sbjct: 218 KCNWLRDKIETPTPRQYNSERRMVIYDRLTWSTQFENFLA 257 >At1g51820.1 68414.m05841 leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase GI:1321686 from (Arabidopsis thaliana); contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069 Length = 885 Score = 36.3 bits (80), Expect = 0.026 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 2/68 (2%) Frame = -1 Query: 619 SKRFRISLNGS-AFS-FSPINVVEGSLNTLSMSASSNLTCCLMTASLAKARMPPCQSALD 446 ++ F ++LNG F FSPI + S+ LS C L K+ +PP +A++ Sbjct: 283 TREFNVTLNGEYTFGPFSPIPLKTASIVDLSPGQCDGGRCILQVVKTLKSTLPPLLNAIE 342 Query: 445 TGSPVDIP 422 + +D P Sbjct: 343 AFTVIDFP 350 >At2g31400.1 68415.m03837 pentatricopeptide (PPR) repeat-containing protein low similarity to fertility restorer [Petunia x hybrida] GI:22128587, post-transcriptional control of chloroplast gene expression CRP1 [Zea mays] GI:3289002; contains Pfam profile PF01535: PPR repeat Length = 918 Score = 35.5 bits (78), Expect = 0.045 Identities = 25/70 (35%), Positives = 32/70 (45%) Frame = +1 Query: 25 NHRLPRFQ*MPTG*RAPPRRNPSLMAPVQLTSRPCTMHGSPTQTPYTRLGMHFSAMRQTE 204 NHR P G APP + + +AP QL+ P + SP QTP + L FS R T Sbjct: 88 NHRPYGASSSPRG-SAPPPSSVATVAPAQLSQPP---NFSPLQTPKSDLSSDFSGRRSTR 143 Query: 205 LSQAPHTRRR 234 H R+ Sbjct: 144 FVSKMHFGRQ 153 >At1g49100.1 68414.m05505 leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069 Length = 888 Score = 34.3 bits (75), Expect = 0.10 Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 5/75 (6%) Frame = -1 Query: 619 SKRFRISLNGSAFSFSPINVVEGSLNTLSMSASSNLTC----CLMT-ASLAKARMPPCQS 455 ++ F + LNG + + P + S++T+S S LTC CL+ K+ +PP + Sbjct: 292 TREFNVLLNGKVY-YGPYSPKMLSIDTMSPQPDSTLTCKGGSCLLQLVKTTKSTLPPLIN 350 Query: 454 ALDTGSPVDIPNGSS 410 A++ + V+ P + Sbjct: 351 AIELFTVVEFPQSET 365 >At3g21340.1 68416.m02695 leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069 Length = 880 Score = 32.3 bits (70), Expect = 0.42 Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Frame = -1 Query: 619 SKRFRISLNGS-AFS-FSPINVVEGSLNTLSMSASSNLTCCLMTASLAKARMPPCQSALD 446 ++ F+++LNG A+ +SP + ++ + + TC L K+ +PP +AL+ Sbjct: 295 TREFKVTLNGKLAYERYSPKTLATETIFYSTPQQCEDGTCLLELTKTPKSTLPPLMNALE 354 Query: 445 TGSPVDIP 422 + +D P Sbjct: 355 VFTVIDFP 362 >At1g51830.1 68414.m05843 leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase GI:1321686 from [Arabidopsis thaliana] Length = 675 Score = 31.5 bits (68), Expect = 0.73 Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 2/68 (2%) Frame = -1 Query: 619 SKRFRISLNG--SAFSFSPINVVEGSLNTLSMSASSNLTCCLMTASLAKARMPPCQSALD 446 ++ F ++LNG + +SP + ++ LS + C L K+ +PP +A++ Sbjct: 94 TREFNVTLNGEYTIGPYSPKPLKTETIQDLSPEQCNGGACILQLVETLKSTLPPLLNAIE 153 Query: 445 TGSPVDIP 422 + +D P Sbjct: 154 AFTVIDFP 161 >At5g20230.1 68418.m02408 plastocyanin-like domain-containing protein Length = 196 Score = 30.3 bits (65), Expect = 1.7 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Frame = +3 Query: 192 ATNGAQPGAAYTPPPNLAPYNKNEVPLTSLVPSSGG--MPSISAGS 323 AT GA PGA TP P P P P++GG PS S+G+ Sbjct: 128 ATGGATPGAGATPAPGSTPSTGGTTP-----PTAGGTTTPSGSSGT 168 >At2g43410.1 68415.m05395 RNA recognition motif (RRM)-containing protein contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) Length = 1056 Score = 29.9 bits (64), Expect = 2.2 Identities = 16/53 (30%), Positives = 21/53 (39%) Frame = +3 Query: 120 ETMYNAWLADPNSVHASWDAFFRNATNGAQPGAAYTPPPNLAPYNKNEVPLTS 278 E AW P +VH + + F+ N P PPP+ P N TS Sbjct: 841 EAPSQAWKRGPQTVHDASNQSFQQYGNQYTPAGQLPPPPSRYPPASNNPNYTS 893 >At1g64450.1 68414.m07306 proline-rich family protein contains proline rich extensins, INTERPRO:IPR0002965 Length = 342 Score = 29.9 bits (64), Expect = 2.2 Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 2/111 (1%) Frame = +3 Query: 24 KPQTAAVSVNANRLKSSTAAEPFLNGSSSAYVETMYNAWLADPN-SVHASWDAFFRNATN 200 KP+ +SVNA +L S + N S S YV + +PN +V + +D+ + + Sbjct: 42 KPKDPKISVNAVQLPSFAVSNNTANFSFSQYVA------VRNPNRAVFSHYDSSIQLLYS 95 Query: 201 GAQPGAAYTPPPNLAPYNKNEVPLTSLVPSSG-GMPSISAGSPINEKIIDD 350 G Q G + P + + T V S PS SA S ++ +I D Sbjct: 96 GNQVGFMFIPAGKIDSGRIQYMAATFTVHSFPISPPSSSAISTVSAAVIPD 146 >At3g24550.1 68416.m03083 protein kinase family protein contains Pfam domain PF00069: Protein kinase domain Length = 652 Score = 29.1 bits (62), Expect = 3.9 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 3/49 (6%) Frame = +3 Query: 189 NATNGAQPGAAYTPPPNLAPYNKNEVP---LTSLVPSSGGMPSISAGSP 326 N+T P AA +PPP P + P TS PSS PS+ SP Sbjct: 21 NSTTTTPPPAASSPPPTTTPSSPPPSPSTNSTSPPPSSPLPPSLPPPSP 69 >At1g51805.1 68414.m05838 leucine-rich repeat protein kinase, putative similar to light repressible receptor protein kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376; contains leucine rich repeat (LRR) domains, Pfam:PF00560; contains protein kinase domain, Pfam:PF00069 Length = 884 Score = 29.1 bits (62), Expect = 3.9 Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 2/66 (3%) Frame = -1 Query: 619 SKRFRISLNGSAF--SFSPINVVEGSLNTLSMSASSNLTCCLMTASLAKARMPPCQSALD 446 ++ F + LNG+ +SPI + + L + C L +K+ +PP +A++ Sbjct: 284 TREFNVMLNGNDLFGPYSPIPLKTETETNLKPEECEDGACILQLVKTSKSTLPPLLNAIE 343 Query: 445 TGSPVD 428 + +D Sbjct: 344 AFTVID 349 >At4g08390.2 68417.m01386 L-ascorbate peroxidase, stromal (sAPX) identical to stromal ascorbate peroxidase [Arabidopsis thaliana] gi|1419388|emb|CAA67425 Length = 372 Score = 28.7 bits (61), Expect = 5.1 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +3 Query: 3 LGSWLLNKPQTAAVSVNANRLKSSTAAEPFLNGSSSAYVETM 128 L LL+ P T + ++ L+S+TAA L SSS+ T+ Sbjct: 9 LNGTLLSPPPTTTTTTMSSSLRSTTAASLLLRSSSSSSRSTL 50 >At4g08390.1 68417.m01385 L-ascorbate peroxidase, stromal (sAPX) identical to stromal ascorbate peroxidase [Arabidopsis thaliana] gi|1419388|emb|CAA67425 Length = 372 Score = 28.7 bits (61), Expect = 5.1 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +3 Query: 3 LGSWLLNKPQTAAVSVNANRLKSSTAAEPFLNGSSSAYVETM 128 L LL+ P T + ++ L+S+TAA L SSS+ T+ Sbjct: 9 LNGTLLSPPPTTTTTTMSSSLRSTTAASLLLRSSSSSSRSTL 50 >At3g01180.1 68416.m00023 glycogen synthase, putative similar to glycogen synthase Q43847 from [Solanum tuberosum] Length = 792 Score = 28.7 bits (61), Expect = 5.1 Identities = 17/51 (33%), Positives = 27/51 (52%) Frame = +1 Query: 73 PPRRNPSLMAPVQLTSRPCTMHGSPTQTPYTRLGMHFSAMRQTELSQAPHT 225 PP + S+M + TS P T G P++ +R G +S + L++AP T Sbjct: 215 PPYKPSSVMTSPEKTSDPVTSPGKPSK---SRAGAFWSDPLPSYLTKAPQT 262 >At2g15530.2 68415.m01778 zinc finger (C3HC4-type RING finger) family protein similar to Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger) Length = 704 Score = 28.7 bits (61), Expect = 5.1 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Frame = +3 Query: 189 NATNGAQPGAAYTPPPNLAPYN---KNEVPLTSLVPSSGGMPSISAGSPI 329 +A + QP + PP N P+N +E+ SL PS PS S G P+ Sbjct: 446 SAIHTPQPNPTWIPPQNAPPHNPSRTSELSPWSLFPSIES-PSASHGGPL 494 >At2g15530.1 68415.m01777 zinc finger (C3HC4-type RING finger) family protein similar to Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger) Length = 704 Score = 28.7 bits (61), Expect = 5.1 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Frame = +3 Query: 189 NATNGAQPGAAYTPPPNLAPYN---KNEVPLTSLVPSSGGMPSISAGSPI 329 +A + QP + PP N P+N +E+ SL PS PS S G P+ Sbjct: 446 SAIHTPQPNPTWIPPQNAPPHNPSRTSELSPWSLFPSIES-PSASHGGPL 494 >At1g20110.1 68414.m02516 zinc finger (FYVE type) family protein contains Pfam profile: PF01363 FYVE zinc finger Length = 601 Score = 28.7 bits (61), Expect = 5.1 Identities = 29/102 (28%), Positives = 40/102 (39%), Gaps = 7/102 (6%) Frame = +3 Query: 27 PQTAAVSVNANRLKSSTAAEP---FLNGSSSAYVETMYNAWLADPNSVHASWDAFFRNAT 197 P A S+N N + P S+Y A P S H + + ++ T Sbjct: 96 PSPPATSLNPNSYSTFNQPPPPPTIHPQPLSSYGSFDSTAPYQQPTSQHMYYSPYDQHQT 155 Query: 198 NGAQ----PGAAYTPPPNLAPYNKNEVPLTSLVPSSGGMPSI 311 +G P +A P PN APY+ + L S P S G SI Sbjct: 156 SGYSSAPPPSSAPAPNPNPAPYSSS---LYSAPPYSSGGSSI 194 >At1g11820.1 68414.m01358 glycosyl hydrolase family 17 protein similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana tabacum] Length = 511 Score = 28.3 bits (60), Expect = 6.8 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = +3 Query: 102 SSSAYVETMYNAWLADPNSVHASWDAFFRNAT 197 +SS Y+ ++N L P ASW F+ N+T Sbjct: 327 TSSVYIYELFNEDLRAPPVSEASWGLFYGNST 358 >At5g57710.1 68418.m07214 heat shock protein-related contains similarity to 101 kDa heat shock protein; HSP101 [Triticum aestivum] gi|11561808|gb|AAC83689 Length = 990 Score = 27.9 bits (59), Expect = 9.0 Identities = 13/48 (27%), Positives = 24/48 (50%) Frame = +3 Query: 546 KLPSTTFIGEKEKALPLREILNRLEQAYCNNIGIEFMFINSLETMQLD 689 K + +G+ E +REIL ++E N+ ++ + SLE + D Sbjct: 230 KKKNPVLVGDSEPGRVIREILKKIEVGEVGNLAVKNSKVVSLEEISSD 277 >At3g09000.1 68416.m01053 proline-rich family protein Length = 541 Score = 27.9 bits (59), Expect = 9.0 Identities = 29/107 (27%), Positives = 39/107 (36%) Frame = +1 Query: 73 PPRRNPSLMAPVQLTSRPCTMHGSPTQTPYTRLGMHFSAMRQTELSQAPHTRRRPIXXXX 252 P RR+ + P TSRP T S +++ +A R T + AP T Sbjct: 162 PTRRSTT---PTTSTSRPVTTRASNSRSSTPTSRATLTAARATTSTAAPRTTTTSSGSAR 218 Query: 253 XXXXXXXXXXCHLAAECLRFQQVPL*TRR*STITSPCRLSSGVTSRG 393 A+ + TRR ST T P +SS SRG Sbjct: 219 SATPTRSNPRPSSASSKKPVSRPATPTRRPSTPTGPSIVSSKAPSRG 265 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,012,840 Number of Sequences: 28952 Number of extensions: 409064 Number of successful extensions: 1342 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 1275 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1339 length of database: 12,070,560 effective HSP length: 80 effective length of database: 9,754,400 effective search space used: 1960634400 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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