Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_E09
         (843 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1418 + 33428527-33428895,33429206-33429280,33429697-334299...    31   1.5  
10_08_0005 + 14030414-14030519,14030612-14030921,14031012-140312...    29   6.1  
04_04_0713 + 27490547-27491401                                         28   8.1  
01_01_0704 + 5434331-5434337,5434480-5434519,5435062-5435134,543...    28   8.1  

>04_04_1418 +
           33428527-33428895,33429206-33429280,33429697-33429978,
           33430058-33430205,33430309-33430388,33431238-33431318,
           33431416-33431514
          Length = 377

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +2

Query: 326 GNWIGD-VTTQDNMNFKIESTQTKINPGPATAVRFFVQYNTLNK 454
           G   GD +   D     +E T+T++N   A A  + V+Y+T+NK
Sbjct: 80  GKCEGDAIVVMDAFALPVEGTETRVN-AQADAYEYMVEYSTINK 122


>10_08_0005 +
           14030414-14030519,14030612-14030921,14031012-14031233,
           14031326-14031565,14031727-14031804,14031841-14032036,
           14032084-14032265,14032351-14032433,14032526-14032650,
           14032762-14032840,14032924-14033092,14033171-14033231,
           14033312-14033434,14033552-14033749,14033927-14033995,
           14034244-14034320,14034475-14034562
          Length = 801

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +2

Query: 341 DVTTQDNMNFKIESTQTKINPGPATAVRFFVQYNTLNKAPRLL 469
           DV      + K+E     IN  P+ +  FF ++ TLN A ++L
Sbjct: 286 DVDNAPASDSKLEPASVAINLTPSISSAFFPRFRTLNHARKIL 328


>04_04_0713 + 27490547-27491401
          Length = 284

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -1

Query: 564 RFGFESPEDRGLSRAGWGLFALQISRP 484
           R GF+ P  RG+ R  WG +  +I  P
Sbjct: 110 RSGFKHPSYRGVRRRSWGKWVSEIREP 136


>01_01_0704 +
           5434331-5434337,5434480-5434519,5435062-5435134,
           5435352-5435468
          Length = 78

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 122 FVTVVLVLALSVRTQDQSTPISPCPNV 202
           FVT VL +++ V+ Q+Q  PISP   +
Sbjct: 26  FVTSVLTISIEVQCQEQWFPISPSTGI 52


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,796,556
Number of Sequences: 37544
Number of extensions: 430823
Number of successful extensions: 1192
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1192
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)